RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 GNRH2O43555 120 aa7.25□□□□□ -1.25
CLCNKA-206ENST00000491433 ZNF876PQ49A33 203 aa7.25□□□□□ -1.25
CLCNKA-206ENST00000491433 COX19Q49B96 90 aa7.25□□□□□ -1.25
CLCNKA-206ENST00000491433 ATP5L2Q7Z4Y8 100 aa7.25□□□□□ -1.25
CLCNKA-206ENST00000491433 DAZ4Q86SG3 579 aaKnown RBP7.25□□□□□ -1.25
CLCNKA-206ENST00000491433 PTH2Q96A98 100 aa7.25□□□□□ -1.25
CLCNKA-206ENST00000491433 C9orf85Q96MD7 179 aa7.25□□□□□ -1.25
CLCNKA-206ENST00000491433 DAZ3Q9NR90 486 aaKnown RBP7.25□□□□□ -1.25
CLCNKA-206ENST00000491433 GRIFINA4D1Z8 144 aa7.24□□□□□ -1.25
CLCNKA-206ENST00000491433 MT1HL1P0DM35 61 aa7.24□□□□□ -1.25
CLCNKA-206ENST00000491433 RAB5AP20339 215 aa7.24□□□□□ -1.25
CLCNKA-206ENST00000491433 CFAP126Q5VTH2 177 aa7.24□□□□□ -1.25
CLCNKA-206ENST00000491433 LYZL1Q6UWQ5 148 aa7.24□□□□□ -1.25
CLCNKA-206ENST00000491433 GNB1LQ9BYB4 327 aa7.24□□□□□ -1.25
CLCNKA-206ENST00000491433 TNXBP22105 4242 aa7.23□□□□□ -1.25
CLCNKA-206ENST00000491433 TMSB15BA0A087X1C1 80 aa7.23□□□□□ -1.25
CLCNKA-206ENST00000491433 A0A1B0GUT8 65 aa7.23□□□□□ -1.25
CLCNKA-206ENST00000491433 A0A1B0GW15 77 aa7.23□□□□□ -1.25
CLCNKA-206ENST00000491433 ARMS2P0C7Q2 107 aa7.23□□□□□ -1.25
CLCNKA-206ENST00000491433 Q0VG73 95 aa7.23□□□□□ -1.25
CLCNKA-206ENST00000491433 TMEM136Q6ZRR5 245 aa7.23□□□□□ -1.25
CLCNKA-206ENST00000491433 FER1L6-AS1Q8NA97 138 aa7.23□□□□□ -1.25
CLCNKA-206ENST00000491433 PGLYRP4Q96LB8 373 aa7.23□□□□□ -1.25
CLCNKA-206ENST00000491433 CHCHD7Q9BUK0 85 aa7.23□□□□□ -1.25
CLCNKA-206ENST00000491433 DPH3P1Q9H4G8 78 aa7.23□□□□□ -1.25
CLCNKA-206ENST00000491433 HNRNPA3P51991 378 aaKnown RBP7.22□□□□□ -1.25
CLCNKA-206ENST00000491433 PIK3CD-AS1Q5SR53 167 aa7.22□□□□□ -1.25
CLCNKA-206ENST00000491433 LCE2AQ5TA79 106 aaPredicted RBP7.22□□□□□ -1.25
CLCNKA-206ENST00000491433 DMRTA1Q5VZB9 504 aa7.22□□□□□ -1.25
CLCNKA-206ENST00000491433 IGHV3-73A0A0B4J1V6 119 aa7.21□□□□□ -1.26
CLCNKA-206ENST00000491433 NTF3P20783 257 aa7.21□□□□□ -1.26
CLCNKA-206ENST00000491433 CACNG7P62955 275 aa7.21□□□□□ -1.26
CLCNKA-206ENST00000491433 RIGQ13278 110 aa7.21□□□□□ -1.26
CLCNKA-206ENST00000491433 ZFP2Q6ZN57 461 aa7.21□□□□□ -1.26
CLCNKA-206ENST00000491433 Q8N3U1 123 aa7.21□□□□□ -1.26
CLCNKA-206ENST00000491433 A0A087WX48 190 aa7.2□□□□□ -1.26
CLCNKA-206ENST00000491433 GAGE12JA6NER3 117 aa7.2□□□□□ -1.26
CLCNKA-206ENST00000491433 MT-ND6P03923 174 aa7.2□□□□□ -1.26
CLCNKA-206ENST00000491433 HBBP68871 147 aa7.2□□□□□ -1.26
CLCNKA-206ENST00000491433 GAGE1Q13065 139 aa7.2□□□□□ -1.26
CLCNKA-206ENST00000491433 GAGE4Q13068 117 aa7.2□□□□□ -1.26
CLCNKA-206ENST00000491433 GAGE5Q13069 117 aa7.2□□□□□ -1.26
CLCNKA-206ENST00000491433 GAGE13Q4V321 117 aa7.2□□□□□ -1.26
CLCNKA-206ENST00000491433 DGAT2L7PQ6IED9 249 aa7.2□□□□□ -1.26
CLCNKA-206ENST00000491433 NIT1Q86X76 327 aa7.2□□□□□ -1.26
CLCNKA-206ENST00000491433 OR10AG1Q8NH19 301 aa7.2□□□□□ -1.26
CLCNKA-206ENST00000491433 UBE2WQ96B02 151 aa7.2□□□□□ -1.26
CLCNKA-206ENST00000491433 C1orf43Q9BWL3 253 aa7.2□□□□□ -1.26
CLCNKA-206ENST00000491433 TMEM191AQ9H0A3 160 aa7.2□□□□□ -1.26
CLCNKA-206ENST00000491433 KLK12Q9UKR0 248 aa7.2□□□□□ -1.26
CLCNKA-206ENST00000491433 KIF25-AS1Q9Y6Z4 181 aa7.2□□□□□ -1.26
CLCNKA-206ENST00000491433 A8MWV9 139 aa7.19□□□□□ -1.26
CLCNKA-206ENST00000491433 H3BVH4 76 aa7.19□□□□□ -1.26
CLCNKA-206ENST00000491433 HLA-DQA1P01909 254 aa7.19□□□□□ -1.26
CLCNKA-206ENST00000491433 S100A8P05109 93 aa7.19□□□□□ -1.26
CLCNKA-206ENST00000491433 LINC00694P0DN24 101 aa7.19□□□□□ -1.26
CLCNKA-206ENST00000491433 MRPL54Q6P161 138 aaKnown RBP7.19□□□□□ -1.26
CLCNKA-206ENST00000491433 TRGC2P03986 189 aa7.18□□□□□ -1.26
CLCNKA-206ENST00000491433 RPS10P46783 165 aaKnown RBP7.18□□□□□ -1.26
CLCNKA-206ENST00000491433 RNF185Q96GF1 192 aa7.18□□□□□ -1.26
CLCNKA-206ENST00000491433 CRPP02741 224 aa7.17□□□□□ -1.26
CLCNKA-206ENST00000491433 S100A4P26447 101 aaKnown RBP7.17□□□□□ -1.26
CLCNKA-206ENST00000491433 FAM104BQ5XKR9 115 aa7.17□□□□□ -1.26
CLCNKA-206ENST00000491433 ZFP82Q8N141 532 aa7.17□□□□□ -1.26
CLCNKA-206ENST00000491433 C9orf163Q8N9P6 203 aa7.17□□□□□ -1.26
CLCNKA-206ENST00000491433 BORCS7Q96B45 105 aa7.17□□□□□ -1.26
CLCNKA-206ENST00000491433 PHLDA3Q9Y5J5 127 aa7.17□□□□□ -1.26
CLCNKA-206ENST00000491433 TRAPPC1Q9Y5R8 145 aa7.17□□□□□ -1.26
CLCNKA-206ENST00000491433 RAB4AP20338 218 aa7.16□□□□□ -1.26
CLCNKA-206ENST00000491433 CAMPP49913 170 aa7.16□□□□□ -1.26
CLCNKA-206ENST00000491433 FABP9Q0Z7S8 132 aa7.16□□□□□ -1.26
CLCNKA-206ENST00000491433 TWIST1Q15672 202 aa7.16□□□□□ -1.26
CLCNKA-206ENST00000491433 UFSP1Q6NVU6 142 aa7.16□□□□□ -1.26
CLCNKA-206ENST00000491433 MRPL18Q9H0U6 180 aaKnown RBP7.16□□□□□ -1.26
CLCNKA-206ENST00000491433 MUC21A0A0G2JKD1 596 aa7.15□□□□□ -1.26
CLCNKA-206ENST00000491433 MUC21A0A140T8X8 626 aa7.15□□□□□ -1.26
CLCNKA-206ENST00000491433 RHODO00212 210 aa7.15□□□□□ -1.26
CLCNKA-206ENST00000491433 TRGC1P0CF51 173 aa7.15□□□□□ -1.26
CLCNKA-206ENST00000491433 SPANXN1Q5VSR9 72 aa7.15□□□□□ -1.26
CLCNKA-206ENST00000491433 TPPP3Q9BW30 176 aa7.15□□□□□ -1.26
CLCNKA-206ENST00000491433 PRSS47A8MTI9 375 aa7.14□□□□□ -1.27
CLCNKA-206ENST00000491433 C1orf196B1AJZ1 125 aa7.14□□□□□ -1.27
CLCNKA-206ENST00000491433 USP17L23D6RBM5 183 aa7.14□□□□□ -1.27
CLCNKA-206ENST00000491433 HIST1H2BKO60814 126 aa7.14□□□□□ -1.27
CLCNKA-206ENST00000491433 APCSP02743 223 aa7.14□□□□□ -1.27
CLCNKA-206ENST00000491433 HIST1H2BJP06899 126 aa7.14□□□□□ -1.27
CLCNKA-206ENST00000491433 HIST1H2BOP23527 126 aa7.14□□□□□ -1.27
CLCNKA-206ENST00000491433 HIST1H2BBP33778 126 aa7.14□□□□□ -1.27
CLCNKA-206ENST00000491433 HIST1H2BDP58876 126 aa7.14□□□□□ -1.27
CLCNKA-206ENST00000491433 PKIAP61925 76 aa7.14□□□□□ -1.27
CLCNKA-206ENST00000491433 HIST1H2BCP62807 126 aa7.14□□□□□ -1.27
CLCNKA-206ENST00000491433 HIST2H2BEQ16778 126 aa7.14□□□□□ -1.27
CLCNKA-206ENST00000491433 COA6Q5JTJ3 125 aaKnown RBP7.14□□□□□ -1.27
CLCNKA-206ENST00000491433 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.14□□□□□ -1.27
CLCNKA-206ENST00000491433 LCE2DQ5TA82 110 aaPredicted RBP7.14□□□□□ -1.27
CLCNKA-206ENST00000491433 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.14□□□□□ -1.27
CLCNKA-206ENST00000491433 HIST1H2BHQ93079 126 aa7.14□□□□□ -1.27
CLCNKA-206ENST00000491433 HIST1H2BNQ99877 126 aa7.14□□□□□ -1.27
CLCNKA-206ENST00000491433 HIST1H2BMQ99879 126 aa7.14□□□□□ -1.27
CLCNKA-206ENST00000491433 ALKBH7Q9BT30 221 aaPredicted RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms