RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 F5H697 171 aa16.59■□□□□ 0.25
USF3-203ENST00000491165 TSHBP01222 138 aa16.59■□□□□ 0.25
USF3-203ENST00000491165 PAPPA-AS1Q5QFB9 102 aa16.59■□□□□ 0.25
USF3-203ENST00000491165 F8W1H4 67 aa16.58■□□□□ 0.25
USF3-203ENST00000491165 ODF3Q96PU9 254 aa16.58■□□□□ 0.25
USF3-203ENST00000491165 SCGB1D4Q6XE38 83 aa16.58■□□□□ 0.24
USF3-203ENST00000491165 TMEM141Q96I45 108 aa16.58■□□□□ 0.24
USF3-203ENST00000491165 IGLV4-69A0A075B6H9 119 aa16.57■□□□□ 0.24
USF3-203ENST00000491165 TEX48A0A1B0GUV7 120 aa16.57■□□□□ 0.24
USF3-203ENST00000491165 EGFEM1PQ0D2K5 195 aa16.57■□□□□ 0.24
USF3-203ENST00000491165 PMVKQ15126 192 aa16.57■□□□□ 0.24
USF3-203ENST00000491165 KNCNA6PVL3 124 aa16.57■□□□□ 0.24
USF3-203ENST00000491165 HERVK_113P61574 105 aa16.57■□□□□ 0.24
USF3-203ENST00000491165 SDHAF1A6NFY7 115 aa16.56■□□□□ 0.24
USF3-203ENST00000491165 C11orf86A6NJI1 115 aa16.56■□□□□ 0.24
USF3-203ENST00000491165 C9orf85Q96MD7 179 aa16.56■□□□□ 0.24
USF3-203ENST00000491165 TIMM17AQ99595 171 aa16.56■□□□□ 0.24
USF3-203ENST00000491165 IGHV3-16A0A0C4DH30 117 aa16.55■□□□□ 0.24
USF3-203ENST00000491165 TMEM238LA0A1B0GVL6 79 aa16.55■□□□□ 0.24
USF3-203ENST00000491165 A6NJY4 79 aa16.55■□□□□ 0.24
USF3-203ENST00000491165 H3BMG7 143 aa16.55■□□□□ 0.24
USF3-203ENST00000491165 RPL39P62891 51 aaKnown RBP16.55■□□□□ 0.24
USF3-203ENST00000491165 A0A0J9YX75 114 aa16.54■□□□□ 0.24
USF3-203ENST00000491165 TRBV6-5A0A0K0K1A5 114 aa16.54■□□□□ 0.24
USF3-203ENST00000491165 TRBV27A0A0K0K1C4 114 aa16.54■□□□□ 0.24
USF3-203ENST00000491165 FAM74A4Q5TZK3 123 aa16.54■□□□□ 0.24
USF3-203ENST00000491165 Q8N1Y9 231 aa16.54■□□□□ 0.24
USF3-203ENST00000491165 SYT8Q8NBV8 401 aa16.54■□□□□ 0.24
USF3-203ENST00000491165 DEFB104AQ8WTQ1 72 aa16.54■□□□□ 0.24
USF3-203ENST00000491165 PLEKHB2Q96CS7 222 aa16.54■□□□□ 0.24
USF3-203ENST00000491165 WFDC2Q14508 124 aa16.53■□□□□ 0.24
USF3-203ENST00000491165 IGKV3-20P01619 116 aa16.52■□□□□ 0.24
USF3-203ENST00000491165 EMP1P54849 157 aa16.52■□□□□ 0.24
USF3-203ENST00000491165 SRSF9Q13242 221 aaKnown RBP eCLIP16.52■□□□□ 0.24
USF3-203ENST00000491165 MORN3Q6PF18 240 aaPredicted RBP16.52■□□□□ 0.24
USF3-203ENST00000491165 TRAV12-2A0A075B6T6 113 aa16.52■□□□□ 0.23
USF3-203ENST00000491165 AMTNQ6UX39 209 aa16.52■□□□□ 0.23
USF3-203ENST00000491165 SPANXB1Q9NS25 103 aaPredicted RBP16.52■□□□□ 0.23
USF3-203ENST00000491165 MDFICQ9P1T7 246 aa16.52■□□□□ 0.23
USF3-203ENST00000491165 FAM110AQ9BQ89 295 aa16.51■□□□□ 0.23
USF3-203ENST00000491165 ZNF56Q15929 161 aa16.51■□□□□ 0.23
USF3-203ENST00000491165 PGPEP1Q9NXJ5 209 aa16.51■□□□□ 0.23
USF3-203ENST00000491165 RBMY1BA6NDE4 496 aaKnown RBP16.5■□□□□ 0.23
USF3-203ENST00000491165 RBMY1EA6NEQ0 496 aaKnown RBP16.5■□□□□ 0.23
USF3-203ENST00000491165 H3BMM0 161 aa16.5■□□□□ 0.23
USF3-203ENST00000491165 RBMY1DP0C7P1 496 aaKnown RBP16.5■□□□□ 0.23
USF3-203ENST00000491165 GAGE13Q4V321 117 aa16.5■□□□□ 0.23
USF3-203ENST00000491165 MRPL16Q9NX20 251 aaKnown RBP16.49■□□□□ 0.23
USF3-203ENST00000491165 IGHV1OR15-1A0A075B7D0 117 aa16.49■□□□□ 0.23
USF3-203ENST00000491165 M0QY20 66 aa16.49■□□□□ 0.23
USF3-203ENST00000491165 ZNF876PQ49A33 203 aa16.49■□□□□ 0.23
USF3-203ENST00000491165 PRB2P02812 416 aaPredicted RBP16.48■□□□□ 0.23
USF3-203ENST00000491165 UBE2D1P51668 147 aa16.48■□□□□ 0.23
USF3-203ENST00000491165 SPINK13Q1W4C9 94 aa16.48■□□□□ 0.23
USF3-203ENST00000491165 TMEM170BQ5T4T1 132 aa16.48■□□□□ 0.23
USF3-203ENST00000491165 TRPT1Q86TN4 253 aaKnown RBP16.48■□□□□ 0.23
USF3-203ENST00000491165 A0A0J9YY99 117 aa16.47■□□□□ 0.23
USF3-203ENST00000491165 RHOHQ15669 191 aa16.47■□□□□ 0.23
USF3-203ENST00000491165 J3QR89 54 aa16.46■□□□□ 0.23
USF3-203ENST00000491165 ZNRF2Q8NHG8 242 aa16.46■□□□□ 0.23
USF3-203ENST00000491165 PRO0461Q9UI25 63 aa16.46■□□□□ 0.23
USF3-203ENST00000491165 ETDBQ3ZM63 59 aa16.45■□□□□ 0.22
USF3-203ENST00000491165 NBEAL2Q6ZNJ1 2754 aa16.44■□□□□ 0.22
USF3-203ENST00000491165 A8MTW9 85 aa16.44■□□□□ 0.22
USF3-203ENST00000491165 TSPEAR-AS2P59090 65 aa16.44■□□□□ 0.22
USF3-203ENST00000491165 SH2D6Q7Z4S9 175 aa16.44■□□□□ 0.22
USF3-203ENST00000491165 STHQ8IWL8 128 aa16.44■□□□□ 0.22
USF3-203ENST00000491165 CMC4P56277 68 aaPredicted RBP16.43■□□□□ 0.22
USF3-203ENST00000491165 KPRPQ5T749 579 aaPredicted RBP16.43■□□□□ 0.22
USF3-203ENST00000491165 MTURNQ8N3F0 131 aa16.43■□□□□ 0.22
USF3-203ENST00000491165 TSPAN13O95857 204 aa16.42■□□□□ 0.22
USF3-203ENST00000491165 RPL35AP18077 110 aaKnown RBP16.42■□□□□ 0.22
USF3-203ENST00000491165 NFE4Q86UQ8 179 aa16.42■□□□□ 0.22
USF3-203ENST00000491165 TRGV11A0A075B6L2 103 aa16.42■□□□□ 0.22
USF3-203ENST00000491165 J3QQQ9 107 aa16.41■□□□□ 0.22
USF3-203ENST00000491165 APOMO95445 188 aa16.41■□□□□ 0.22
USF3-203ENST00000491165 IGHV4-30-4P0DP06 118 aa16.41■□□□□ 0.22
USF3-203ENST00000491165 SLC25A29Q8N8R3 303 aa16.41■□□□□ 0.22
USF3-203ENST00000491165 I3L3M4 83 aa16.4■□□□□ 0.22
USF3-203ENST00000491165 IGHV3-30P01768 117 aa16.4■□□□□ 0.22
USF3-203ENST00000491165 P0DMU3 169 aa16.4■□□□□ 0.22
USF3-203ENST00000491165 FAM231AP0DMU4 169 aa16.4■□□□□ 0.22
USF3-203ENST00000491165 FAM231CP0DMU5 169 aa16.4■□□□□ 0.22
USF3-203ENST00000491165 IGHV3-30-5P0DP03 117 aa16.4■□□□□ 0.22
USF3-203ENST00000491165 LGALS3P17931 250 aaKnown RBP16.4■□□□□ 0.22
USF3-203ENST00000491165 C20orf203Q8NBC4 194 aa16.4■□□□□ 0.22
USF3-203ENST00000491165 GIG44P09565 113 aaPredicted RBP16.39■□□□□ 0.21
USF3-203ENST00000491165 AMELXQ99217 191 aa16.39■□□□□ 0.21
USF3-203ENST00000491165 OPRPNQ99935 248 aaPredicted RBP16.39■□□□□ 0.21
USF3-203ENST00000491165 LOC107984156A0A0G2JMH3 177 aa16.38■□□□□ 0.21
USF3-203ENST00000491165 TMEM238C9JI98 176 aa16.38■□□□□ 0.21
USF3-203ENST00000491165 LYRM7Q5U5X0 104 aa16.38■□□□□ 0.21
USF3-203ENST00000491165 ARL17AQ8IVW1 177 aa16.38■□□□□ 0.21
USF3-203ENST00000491165 UBE2D3P61077 147 aa16.37■□□□□ 0.21
USF3-203ENST00000491165 UBE2D2P62837 147 aa16.37■□□□□ 0.21
USF3-203ENST00000491165 MEGF8Q7Z7M0 2845 aa16.37■□□□□ 0.21
USF3-203ENST00000491165 CLUHP3Q96NS8 147 aa16.37■□□□□ 0.21
USF3-203ENST00000491165 TMEM223A0PJW6 202 aa16.36■□□□□ 0.21
USF3-203ENST00000491165 GAGE12HA6NDE8 117 aa16.36■□□□□ 0.21
USF3-203ENST00000491165 LEPROTO15243 131 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms