RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 C20orf203Q8NBC4 194 aa20.46■□□□□ 0.87
LDB1-204ENST00000490751 NDUFS6O75380 124 aaKnown RBP20.45■□□□□ 0.86
LDB1-204ENST00000490751 FOXA3P55318 350 aaPredicted RBP20.45■□□□□ 0.86
LDB1-204ENST00000490751 REG3AQ06141 175 aa20.45■□□□□ 0.86
LDB1-204ENST00000490751 CT83Q5H943 113 aa20.45■□□□□ 0.86
LDB1-204ENST00000490751 AMTP48728 403 aa20.44■□□□□ 0.86
LDB1-204ENST00000490751 KRTAP26-1Q6PEX3 210 aa20.44■□□□□ 0.86
LDB1-204ENST00000490751 IGLV4-60A0A075B6I1 120 aa20.43■□□□□ 0.86
LDB1-204ENST00000490751 A0A1B0GUV1 79 aa20.43■□□□□ 0.86
LDB1-204ENST00000490751 LINC01551Q86U37 167 aa20.43■□□□□ 0.86
LDB1-204ENST00000490751 RPL39LQ96EH5 51 aaKnown RBP20.43■□□□□ 0.86
LDB1-204ENST00000490751 ZNF727A8MUV8 499 aa20.42■□□□□ 0.86
LDB1-204ENST00000490751 UBE2L6O14933 153 aa20.42■□□□□ 0.86
LDB1-204ENST00000490751 SRP19P09132 144 aaKnown RBP20.42■□□□□ 0.86
LDB1-204ENST00000490751 IGLV10-54A0A075B6I4 117 aa20.41■□□□□ 0.86
LDB1-204ENST00000490751 SCXQ7RTU7 201 aa20.41■□□□□ 0.86
LDB1-204ENST00000490751 GFRA4Q9GZZ7 299 aa20.4■□□□□ 0.86
LDB1-204ENST00000490751 PRSS1P07477 247 aa20.39■□□□□ 0.85
LDB1-204ENST00000490751 BORCS7Q96B45 105 aa20.39■□□□□ 0.85
LDB1-204ENST00000490751 SRRM2Q9UQ35 2752 aaKnown RBP20.38■□□□□ 0.85
LDB1-204ENST00000490751 TEX261Q6UWH6 196 aa20.38■□□□□ 0.85
LDB1-204ENST00000490751 TRAV8-4A0A0B4J246 113 aa20.37■□□□□ 0.85
LDB1-204ENST00000490751 LINC00528Q8N1L1 170 aa20.37■□□□□ 0.85
LDB1-204ENST00000490751 TSKUQ8WUA8 353 aa20.37■□□□□ 0.85
LDB1-204ENST00000490751 OSTCQ9NRP0 149 aa20.37■□□□□ 0.85
LDB1-204ENST00000490751 CHAC1Q9BUX1 264 aa20.36■□□□□ 0.85
LDB1-204ENST00000490751 HIGD1CA8MV81 97 aa20.35■□□□□ 0.85
LDB1-204ENST00000490751 SDHAF1A6NFY7 115 aa20.34■□□□□ 0.85
LDB1-204ENST00000490751 A0A1B0GUT8 65 aa20.33■□□□□ 0.85
LDB1-204ENST00000490751 NCR2O95944 276 aa20.33■□□□□ 0.85
LDB1-204ENST00000490751 PLA2G1BP04054 148 aaKnown RBP20.32■□□□□ 0.84
LDB1-204ENST00000490751 DGAT2L7PQ6IED9 249 aa20.32■□□□□ 0.84
LDB1-204ENST00000490751 FAM231BA6NCW3 169 aa20.31■□□□□ 0.84
LDB1-204ENST00000490751 APCSP02743 223 aa20.31■□□□□ 0.84
LDB1-204ENST00000490751 CIRBP-AS1Q8TBR5 109 aa20.31■□□□□ 0.84
LDB1-204ENST00000490751 FLG2Q5D862 2391 aaPredicted RBP20.31■□□□□ 0.84
LDB1-204ENST00000490751 TMEM191AQ9H0A3 160 aa20.3■□□□□ 0.84
LDB1-204ENST00000490751 V9GYV3 84 aa20.3■□□□□ 0.84
LDB1-204ENST00000490751 IGKV2D-29A0A075B6S2 120 aaPredicted RBP20.29■□□□□ 0.84
LDB1-204ENST00000490751 IGKV2-29A2NJV5 120 aaPredicted RBP20.29■□□□□ 0.84
LDB1-204ENST00000490751 CLRN3Q8NCR9 226 aa20.29■□□□□ 0.84
LDB1-204ENST00000490751 ISOC2Q96AB3 205 aa20.29■□□□□ 0.84
LDB1-204ENST00000490751 MYCBP2O75592 4640 aa20.29■□□□□ 0.84
LDB1-204ENST00000490751 TRBV6-5A0A0K0K1A5 114 aa20.28■□□□□ 0.84
LDB1-204ENST00000490751 GAS8-AS1O95177 125 aa20.28■□□□□ 0.84
LDB1-204ENST00000490751 TMEM241Q24JQ0 296 aa20.28■□□□□ 0.84
LDB1-204ENST00000490751 FAM74A3Q4VXF1 159 aa20.28■□□□□ 0.84
LDB1-204ENST00000490751 AMMECR1LQ6DCA0 310 aa20.28■□□□□ 0.84
LDB1-204ENST00000490751 C9orf163Q8N9P6 203 aa20.28■□□□□ 0.84
LDB1-204ENST00000490751 IGKV3OR2-268A0A0C4DH90 116 aa20.26■□□□□ 0.83
LDB1-204ENST00000490751 C9JQL5 133 aa20.26■□□□□ 0.83
LDB1-204ENST00000490751 I3L3M4 83 aa20.26■□□□□ 0.83
LDB1-204ENST00000490751 PMCHP20382 165 aa20.26■□□□□ 0.83
LDB1-204ENST00000490751 RPL23P62829 140 aaKnown RBP20.26■□□□□ 0.83
LDB1-204ENST00000490751 RNASEKQ6P5S7 137 aaKnown RBP20.26■□□□□ 0.83
LDB1-204ENST00000490751 RNF185Q96GF1 192 aa20.26■□□□□ 0.83
LDB1-204ENST00000490751 H7C423 109 aa20.25■□□□□ 0.83
LDB1-204ENST00000490751 ST20Q9HBF5 79 aa20.25■□□□□ 0.83
LDB1-204ENST00000490751 hDV102S1A0JD36 115 aa20.24■□□□□ 0.83
LDB1-204ENST00000490751 AMN1Q8IY45 258 aa20.24■□□□□ 0.83
LDB1-204ENST00000490751 NUP35Q8NFH5 326 aa20.24■□□□□ 0.83
LDB1-204ENST00000490751 FGF6P10767 208 aa20.23■□□□□ 0.83
LDB1-204ENST00000490751 RAB4AP20338 218 aa20.23■□□□□ 0.83
LDB1-204ENST00000490751 ADIRFQ15847 76 aa20.23■□□□□ 0.83
LDB1-204ENST00000490751 DMBT1Q9UGM3 2413 aaPredicted RBP20.22■□□□□ 0.83
LDB1-204ENST00000490751 RIGQ13278 110 aa20.22■□□□□ 0.83
LDB1-204ENST00000490751 MRAP2Q96G30 205 aa20.22■□□□□ 0.83
LDB1-204ENST00000490751 NAT8Q9UHE5 227 aa20.22■□□□□ 0.83
LDB1-204ENST00000490751 GAGE12HA6NDE8 117 aa20.21■□□□□ 0.83
LDB1-204ENST00000490751 RPS10P46783 165 aaKnown RBP20.21■□□□□ 0.83
LDB1-204ENST00000490751 SRSF3P84103 164 aaKnown RBP20.21■□□□□ 0.83
LDB1-204ENST00000490751 TMEM242Q9NWH2 141 aa20.21■□□□□ 0.83
LDB1-204ENST00000490751 HERC1Q15751 4861 aa20.2■□□□□ 0.82
LDB1-204ENST00000490751 TSHBP01222 138 aa20.2■□□□□ 0.82
LDB1-204ENST00000490751 CNBPP62633 177 aaKnown RBP20.2■□□□□ 0.82
LDB1-204ENST00000490751 PEA15Q15121 130 aa20.2■□□□□ 0.82
LDB1-204ENST00000490751 AP5S1Q9NUS5 200 aa20.19■□□□□ 0.82
LDB1-204ENST00000490751 NAT8BQ9UHF3 227 aa20.19■□□□□ 0.82
LDB1-204ENST00000490751 ESDP10768 282 aa20.18■□□□□ 0.82
LDB1-204ENST00000490751 ZNF25P17030 456 aaPredicted RBP20.18■□□□□ 0.82
LDB1-204ENST00000490751 POLR2KP53803 58 aaKnown RBP20.18■□□□□ 0.82
LDB1-204ENST00000490751 CHCHD10Q8WYQ3 142 aaPredicted RBP20.17■□□□□ 0.82
LDB1-204ENST00000490751 SMKR1H3BMG3 65 aa20.16■□□□□ 0.82
LDB1-204ENST00000490751 SDIM1Q6ZPB5 146 aa20.16■□□□□ 0.82
LDB1-204ENST00000490751 BTF3L4Q96K17 158 aa20.16■□□□□ 0.82
LDB1-204ENST00000490751 SMDT1Q9H4I9 107 aa20.16■□□□□ 0.82
LDB1-204ENST00000490751 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP20.16■□□□□ 0.82
LDB1-204ENST00000490751 C15orf56Q8N910 161 aa20.15■□□□□ 0.82
LDB1-204ENST00000490751 TMEM101Q96IK0 257 aa20.15■□□□□ 0.82
LDB1-204ENST00000490751 TRBV27A0A0K0K1C4 114 aa20.14■□□□□ 0.81
LDB1-204ENST00000490751 SLPIP03973 132 aa20.14■□□□□ 0.81
LDB1-204ENST00000490751 TRAV16A0A0A6YYK6 109 aaPredicted RBP20.13■□□□□ 0.81
LDB1-204ENST00000490751 PANO1I0J062 215 aa20.13■□□□□ 0.81
LDB1-204ENST00000490751 KRTAP10-4P60372 401 aaPredicted RBP20.13■□□□□ 0.81
LDB1-204ENST00000490751 CFAP161Q6P656 301 aa20.13■□□□□ 0.81
LDB1-204ENST00000490751 OR5A1Q8NGJ0 315 aa20.13■□□□□ 0.81
LDB1-204ENST00000490751 SMIM27A0A1W2PRY6 76 aa20.12■□□□□ 0.81
LDB1-204ENST00000490751 IGHV3-64A0A075B6Q5 118 aa20.1■□□□□ 0.81
LDB1-204ENST00000490751 NRACQ8N912 160 aa20.1■□□□□ 0.81
LDB1-204ENST00000490751 C7orf77A4D0Y5 90 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms