RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 C9orf62Q8N4C0 152 aa13.5□□□□□ -0.25
SYNE4-205ENST00000490730 PGLYRP4Q96LB8 373 aa13.5□□□□□ -0.25
SYNE4-205ENST00000490730 GFRA4Q9GZZ7 299 aa13.5□□□□□ -0.25
SYNE4-205ENST00000490730 A0A1B0GUV1 79 aa13.49□□□□□ -0.25
SYNE4-205ENST00000490730 TCTE3Q8IZS6 198 aa13.49□□□□□ -0.25
SYNE4-205ENST00000490730 RNASE7Q9H1E1 156 aaKnown RBP13.49□□□□□ -0.25
SYNE4-205ENST00000490730 RPP21Q9H633 154 aaKnown RBP13.49□□□□□ -0.25
SYNE4-205ENST00000490730 PKHD1L1Q86WI1 4243 aa13.49□□□□□ -0.25
SYNE4-205ENST00000490730 FAT3Q8TDW7 4589 aa13.48□□□□□ -0.25
SYNE4-205ENST00000490730 WDR73Q6P4I2 378 aa13.48□□□□□ -0.25
SYNE4-205ENST00000490730 TRAV26-2A0A0B4J265 109 aa13.47□□□□□ -0.25
SYNE4-205ENST00000490730 PANO1I0J062 215 aa13.47□□□□□ -0.25
SYNE4-205ENST00000490730 TAGLN2P37802 199 aaKnown RBP13.47□□□□□ -0.25
SYNE4-205ENST00000490730 AP5S1Q9NUS5 200 aa13.47□□□□□ -0.25
SYNE4-205ENST00000490730 IGKV3OR2-268A0A0C4DH90 116 aa13.46□□□□□ -0.25
SYNE4-205ENST00000490730 K7EN84 100 aa13.46□□□□□ -0.25
SYNE4-205ENST00000490730 OXTP01178 125 aa13.46□□□□□ -0.25
SYNE4-205ENST00000490730 SDIM1Q6ZPB5 146 aa13.46□□□□□ -0.25
SYNE4-205ENST00000490730 CNBPP62633 177 aaKnown RBP13.45□□□□□ -0.26
SYNE4-205ENST00000490730 GATD1Q8NB37 220 aa13.45□□□□□ -0.26
SYNE4-205ENST00000490730 OCC1Q8TAD7 63 aa13.45□□□□□ -0.26
SYNE4-205ENST00000490730 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.44□□□□□ -0.26
SYNE4-205ENST00000490730 SMIM15Q7Z3B0 74 aa13.44□□□□□ -0.26
SYNE4-205ENST00000490730 DPH3Q96FX2 82 aa13.44□□□□□ -0.26
SYNE4-205ENST00000490730 CNFNQ9BYD5 112 aa13.44□□□□□ -0.26
SYNE4-205ENST00000490730 IGHV3-64A0A075B6Q5 118 aa13.43□□□□□ -0.26
SYNE4-205ENST00000490730 AMMECR1LQ6DCA0 310 aa13.43□□□□□ -0.26
SYNE4-205ENST00000490730 RPL39LQ96EH5 51 aaKnown RBP13.43□□□□□ -0.26
SYNE4-205ENST00000490730 GAGE12HA6NDE8 117 aa13.42□□□□□ -0.26
SYNE4-205ENST00000490730 HNRNPA3P51991 378 aaKnown RBP13.42□□□□□ -0.26
SYNE4-205ENST00000490730 FOXA3P55318 350 aaPredicted RBP13.41□□□□□ -0.26
SYNE4-205ENST00000490730 SERTAD4-AS1Q5TG53 156 aa13.41□□□□□ -0.26
SYNE4-205ENST00000490730 Q6ZNX1 250 aa13.41□□□□□ -0.26
SYNE4-205ENST00000490730 GTSF1Q8WW33 167 aa13.41□□□□□ -0.26
SYNE4-205ENST00000490730 GATCO43716 136 aaKnown RBP13.4□□□□□ -0.26
SYNE4-205ENST00000490730 SLPIP03973 132 aa13.4□□□□□ -0.26
SYNE4-205ENST00000490730 CHTF8P0CG12 524 aa13.4□□□□□ -0.26
SYNE4-205ENST00000490730 CEBPGP53567 150 aa13.4□□□□□ -0.26
SYNE4-205ENST00000490730 RNASEKQ6P5S7 137 aaKnown RBP13.4□□□□□ -0.26
SYNE4-205ENST00000490730 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.39□□□□□ -0.27
SYNE4-205ENST00000490730 IGKV2-29A2NJV5 120 aaPredicted RBP13.39□□□□□ -0.27
SYNE4-205ENST00000490730 APCSP02743 223 aa13.39□□□□□ -0.27
SYNE4-205ENST00000490730 HMCN2Q8NDA2 5059 aa13.39□□□□□ -0.27
SYNE4-205ENST00000490730 CFAP161Q6P656 301 aa13.38□□□□□ -0.27
SYNE4-205ENST00000490730 ALKAL2Q6UX46 152 aa13.38□□□□□ -0.27
SYNE4-205ENST00000490730 SDHAF1A6NFY7 115 aa13.37□□□□□ -0.27
SYNE4-205ENST00000490730 NCR2O95944 276 aa13.37□□□□□ -0.27
SYNE4-205ENST00000490730 CIRBPQ14011 172 aaKnown RBP13.37□□□□□ -0.27
SYNE4-205ENST00000490730 HIGD2BQ4VC39 106 aa13.37□□□□□ -0.27
SYNE4-205ENST00000490730 TEX261Q6UWH6 196 aa13.37□□□□□ -0.27
SYNE4-205ENST00000490730 C15orf56Q8N910 161 aa13.37□□□□□ -0.27
SYNE4-205ENST00000490730 TMEM250H0YL14 139 aa13.36□□□□□ -0.27
SYNE4-205ENST00000490730 BLOC1S1P78537 153 aa13.36□□□□□ -0.27
SYNE4-205ENST00000490730 CHCHD10Q8WYQ3 142 aaPredicted RBP13.36□□□□□ -0.27
SYNE4-205ENST00000490730 A0A087WYN8 130 aa13.35□□□□□ -0.27
SYNE4-205ENST00000490730 A8MWL6 223 aa13.35□□□□□ -0.27
SYNE4-205ENST00000490730 FGF6P10767 208 aa13.35□□□□□ -0.27
SYNE4-205ENST00000490730 AKAP14Q86UN6 197 aa13.35□□□□□ -0.27
SYNE4-205ENST00000490730 BORCS7Q96B45 105 aa13.35□□□□□ -0.27
SYNE4-205ENST00000490730 PMCHP20382 165 aa13.34□□□□□ -0.27
SYNE4-205ENST00000490730 FAM231DQ6ZW35 169 aa13.34□□□□□ -0.27
SYNE4-205ENST00000490730 SPACA4Q8TDM5 124 aa13.34□□□□□ -0.27
SYNE4-205ENST00000490730 RNF185Q96GF1 192 aa13.34□□□□□ -0.27
SYNE4-205ENST00000490730 hCG_2014768A0A024R1R8 64 aa13.33□□□□□ -0.28
SYNE4-205ENST00000490730 H7C423 109 aa13.33□□□□□ -0.28
SYNE4-205ENST00000490730 I3L3M4 83 aa13.33□□□□□ -0.28
SYNE4-205ENST00000490730 RPS10P46783 165 aaKnown RBP13.32□□□□□ -0.28
SYNE4-205ENST00000490730 COX6A2Q02221 97 aa13.32□□□□□ -0.28
SYNE4-205ENST00000490730 IGKV2-24A0A0C4DH68 120 aa13.31□□□□□ -0.28
SYNE4-205ENST00000490730 TMEM101Q96IK0 257 aa13.31□□□□□ -0.28
SYNE4-205ENST00000490730 BTF3L4Q96K17 158 aa13.31□□□□□ -0.28
SYNE4-205ENST00000490730 PLA2G2DQ9UNK4 145 aa13.31□□□□□ -0.28
SYNE4-205ENST00000490730 XCL1P47992 114 aa13.3□□□□□ -0.28
SYNE4-205ENST00000490730 CT83Q5H943 113 aa13.3□□□□□ -0.28
SYNE4-205ENST00000490730 SMIM7Q9BQ49 75 aa13.3□□□□□ -0.28
SYNE4-205ENST00000490730 EIF5A2Q9GZV4 153 aaKnown RBP13.3□□□□□ -0.28
SYNE4-205ENST00000490730 ST20Q9HBF5 79 aa13.3□□□□□ -0.28
SYNE4-205ENST00000490730 GAS8-AS1O95177 125 aa13.29□□□□□ -0.28
SYNE4-205ENST00000490730 ZNF25P17030 456 aaPredicted RBP13.29□□□□□ -0.28
SYNE4-205ENST00000490730 MAJINQ3KP22 176 aa13.29□□□□□ -0.28
SYNE4-205ENST00000490730 TMEM242Q9NWH2 141 aa13.29□□□□□ -0.28
SYNE4-205ENST00000490730 GVQW2A0A096LPI5 108 aaPredicted RBP13.28□□□□□ -0.28
SYNE4-205ENST00000490730 TRBV6-5A0A0K0K1A5 114 aa13.28□□□□□ -0.28
SYNE4-205ENST00000490730 FAM231BA6NCW3 169 aa13.28□□□□□ -0.28
SYNE4-205ENST00000490730 NDUFS6O75380 124 aaKnown RBP13.28□□□□□ -0.28
SYNE4-205ENST00000490730 FOXI1Q12951 378 aa13.28□□□□□ -0.28
SYNE4-205ENST00000490730 OR5A1Q8NGJ0 315 aa13.28□□□□□ -0.28
SYNE4-205ENST00000490730 PRSS3P2Q8NHM4 247 aa13.28□□□□□ -0.28
SYNE4-205ENST00000490730 LYPD6BQ8NI32 183 aa13.28□□□□□ -0.28
SYNE4-205ENST00000490730 C7orf33Q8WU49 177 aa13.28□□□□□ -0.28
SYNE4-205ENST00000490730 PLAC8Q9NZF1 115 aa13.28□□□□□ -0.28
SYNE4-205ENST00000490730 A0A1B0GUT8 65 aa13.27□□□□□ -0.29
SYNE4-205ENST00000490730 HIGD1CA8MV81 97 aa13.27□□□□□ -0.29
SYNE4-205ENST00000490730 PHOX2AO14813 284 aa13.27□□□□□ -0.29
SYNE4-205ENST00000490730 TSHBP01222 138 aa13.27□□□□□ -0.29
SYNE4-205ENST00000490730 MRAP2Q96G30 205 aa13.27□□□□□ -0.29
SYNE4-205ENST00000490730 CCL25O15444 150 aa13.26□□□□□ -0.29
SYNE4-205ENST00000490730 UBR4Q5T4S7 5183 aa13.26□□□□□ -0.29
SYNE4-205ENST00000490730 Q6ZRU5 148 aa13.26□□□□□ -0.29
SYNE4-205ENST00000490730 LINC01551Q86U37 167 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms