RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 PAGE4O60829 102 aa12.19□□□□□ -0.46
UPK3B-205ENST00000490360 CHCHD10Q8WYQ3 142 aaPredicted RBP12.19□□□□□ -0.46
UPK3B-205ENST00000490360 ALG5Q9Y673 324 aa12.19□□□□□ -0.46
UPK3B-205ENST00000490360 PFDN1O60925 122 aa12.18□□□□□ -0.46
UPK3B-205ENST00000490360 IGKV3OR2-268A0A0C4DH90 116 aa12.17□□□□□ -0.46
UPK3B-205ENST00000490360 TRGC1P0CF51 173 aa12.17□□□□□ -0.46
UPK3B-205ENST00000490360 RPS20P60866 119 aaKnown RBP12.17□□□□□ -0.46
UPK3B-205ENST00000490360 ZNF664Q8N3J9 261 aa12.17□□□□□ -0.46
UPK3B-205ENST00000490360 FER1L6-AS1Q8NA97 138 aa12.17□□□□□ -0.46
UPK3B-205ENST00000490360 F2Z2F3 143 aa12.16□□□□□ -0.46
UPK3B-205ENST00000490360 GIPP09681 153 aaPredicted RBP12.16□□□□□ -0.46
UPK3B-205ENST00000490360 IGLC6P0CF74 106 aa12.16□□□□□ -0.46
UPK3B-205ENST00000490360 AMMECR1LQ6DCA0 310 aa12.16□□□□□ -0.46
UPK3B-205ENST00000490360 TPPP3Q9BW30 176 aa12.16□□□□□ -0.46
UPK3B-205ENST00000490360 SCO2A0A1W2PP80 73 aa12.15□□□□□ -0.46
UPK3B-205ENST00000490360 H7C423 109 aa12.15□□□□□ -0.46
UPK3B-205ENST00000490360 Q5BKY6 102 aa12.15□□□□□ -0.46
UPK3B-205ENST00000490360 FXYD6-FXYD2A0A087WZ82 144 aa12.14□□□□□ -0.47
UPK3B-205ENST00000490360 TMUB2Q71RG4 321 aa12.14□□□□□ -0.47
UPK3B-205ENST00000490360 CARD19Q96LW7 228 aa12.14□□□□□ -0.47
UPK3B-205ENST00000490360 PSORS1C2Q9UIG4 136 aa12.14□□□□□ -0.47
UPK3B-205ENST00000490360 LPAP08519 4548 aa12.13□□□□□ -0.47
UPK3B-205ENST00000490360 XKRY2A2RUG3 117 aa12.13□□□□□ -0.47
UPK3B-205ENST00000490360 IGHV1-58A0A0C4DH39 117 aa12.12□□□□□ -0.47
UPK3B-205ENST00000490360 A0A0U1RQV1 116 aa12.12□□□□□ -0.47
UPK3B-205ENST00000490360 NCR2O95944 276 aa12.12□□□□□ -0.47
UPK3B-205ENST00000490360 FOXI1Q12951 378 aa12.12□□□□□ -0.47
UPK3B-205ENST00000490360 OR2D3Q8NGH3 330 aa12.11□□□□□ -0.47
UPK3B-205ENST00000490360 SFT2D1Q8WV19 159 aa12.11□□□□□ -0.47
UPK3B-205ENST00000490360 MBD3L1Q8WWY6 194 aa12.11□□□□□ -0.47
UPK3B-205ENST00000490360 ZNF25P17030 456 aaPredicted RBP12.1□□□□□ -0.47
UPK3B-205ENST00000490360 NTF3P20783 257 aa12.1□□□□□ -0.47
UPK3B-205ENST00000490360 RPL35P42766 123 aaKnown RBP12.1□□□□□ -0.47
UPK3B-205ENST00000490360 RNASEKQ6P5S7 137 aaKnown RBP12.1□□□□□ -0.47
UPK3B-205ENST00000490360 UMAD1C9J7I0 102 aa12.09□□□□□ -0.47
UPK3B-205ENST00000490360 PTTG1IPP53801 180 aa12.09□□□□□ -0.47
UPK3B-205ENST00000490360 SYCNQ0VAF6 134 aa12.09□□□□□ -0.47
UPK3B-205ENST00000490360 OR5A1Q8NGJ0 315 aa12.09□□□□□ -0.47
UPK3B-205ENST00000490360 TRAV26-2A0A0B4J265 109 aa12.08□□□□□ -0.48
UPK3B-205ENST00000490360 ZNF561-AS1K7EIQ3 104 aa12.08□□□□□ -0.48
UPK3B-205ENST00000490360 ISOC2Q96AB3 205 aa12.08□□□□□ -0.48
UPK3B-205ENST00000490360 LOC107984640A0A0U1RRK4 108 aa12.07□□□□□ -0.48
UPK3B-205ENST00000490360 FGF6P10767 208 aa12.07□□□□□ -0.48
UPK3B-205ENST00000490360 XCL1P47992 114 aa12.07□□□□□ -0.48
UPK3B-205ENST00000490360 KCNRGQ8N5I3 272 aa12.07□□□□□ -0.48
UPK3B-205ENST00000490360 SMIM12Q96EX1 92 aa12.07□□□□□ -0.48
UPK3B-205ENST00000490360 KRTAP9-2Q9BYQ4 174 aa12.07□□□□□ -0.48
UPK3B-205ENST00000490360 CYTL1Q9NRR1 136 aa12.07□□□□□ -0.48
UPK3B-205ENST00000490360 APCSP02743 223 aa12.06□□□□□ -0.48
UPK3B-205ENST00000490360 MT-ND6P03923 174 aa12.06□□□□□ -0.48
UPK3B-205ENST00000490360 BTF3L4Q96K17 158 aa12.06□□□□□ -0.48
UPK3B-205ENST00000490360 C19orf71A6NCJ1 209 aa12.05□□□□□ -0.48
UPK3B-205ENST00000490360 IFNA1P01562 189 aa12.05□□□□□ -0.48
UPK3B-205ENST00000490360 LYZL1Q6UWQ5 148 aa12.05□□□□□ -0.48
UPK3B-205ENST00000490360 C9orf62Q8N4C0 152 aa12.05□□□□□ -0.48
UPK3B-205ENST00000490360 FAM213BQ8TBF2 198 aa12.05□□□□□ -0.48
UPK3B-205ENST00000490360 TMEM101Q96IK0 257 aa12.05□□□□□ -0.48
UPK3B-205ENST00000490360 LINC00959A0A1B0GUT2 108 aa12.04□□□□□ -0.48
UPK3B-205ENST00000490360 CCL25O15444 150 aa12.04□□□□□ -0.48
UPK3B-205ENST00000490360 Q6ZNX1 250 aa12.04□□□□□ -0.48
UPK3B-205ENST00000490360 DIRC1Q969H9 104 aa12.04□□□□□ -0.48
UPK3B-205ENST00000490360 C11orf52Q96A22 123 aa12.04□□□□□ -0.48
UPK3B-205ENST00000490360 LINC00526Q96FQ7 95 aa12.04□□□□□ -0.48
UPK3B-205ENST00000490360 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.03□□□□□ -0.48
UPK3B-205ENST00000490360 IGKV2-29A2NJV5 120 aaPredicted RBP12.03□□□□□ -0.48
UPK3B-205ENST00000490360 GAGE2BQ13066 116 aa12.03□□□□□ -0.48
UPK3B-205ENST00000490360 SS18Q15532 418 aa12.03□□□□□ -0.48
UPK3B-205ENST00000490360 CENPWQ5EE01 88 aa12.03□□□□□ -0.48
UPK3B-205ENST00000490360 TEX261Q6UWH6 196 aa12.03□□□□□ -0.48
UPK3B-205ENST00000490360 GATD1Q8NB37 220 aa12.03□□□□□ -0.48
UPK3B-205ENST00000490360 FAM210AQ96ND0 272 aa12.03□□□□□ -0.48
UPK3B-205ENST00000490360 BIN3Q9NQY0 253 aa12.03□□□□□ -0.48
UPK3B-205ENST00000490360 MUC2Q02817 5179 aa12.03□□□□□ -0.48
UPK3B-205ENST00000490360 A0A1B0GV50 99 aa12.02□□□□□ -0.49
UPK3B-205ENST00000490360 ARPC5O15511 151 aa12.02□□□□□ -0.49
UPK3B-205ENST00000490360 CTRLP40313 264 aa12.02□□□□□ -0.49
UPK3B-205ENST00000490360 CAMPP49913 170 aa12.02□□□□□ -0.49
UPK3B-205ENST00000490360 CD164L2Q6UWJ8 174 aa12.02□□□□□ -0.49
UPK3B-205ENST00000490360 CNFNQ9BYD5 112 aa12.02□□□□□ -0.49
UPK3B-205ENST00000490360 H2AFB1P0C5Y9 115 aa12.01□□□□□ -0.49
UPK3B-205ENST00000490360 EIF5AP63241 154 aaKnown RBP12.01□□□□□ -0.49
UPK3B-205ENST00000490360 TWIST1Q15672 202 aa12.01□□□□□ -0.49
UPK3B-205ENST00000490360 C1orf137Q5JT78 98 aa12.01□□□□□ -0.49
UPK3B-205ENST00000490360 EIF5AL1Q6IS14 154 aaKnown RBP12.01□□□□□ -0.49
UPK3B-205ENST00000490360 MANBALQ9NQG1 85 aa12.01□□□□□ -0.49
UPK3B-205ENST00000490360 A0A1W2PNN7 141 aa12□□□□□ -0.49
UPK3B-205ENST00000490360 GNG4P50150 75 aa12□□□□□ -0.49
UPK3B-205ENST00000490360 IGLV4-69A0A075B6H9 119 aa11.99□□□□□ -0.49
UPK3B-205ENST00000490360 CCL20P78556 96 aa11.99□□□□□ -0.49
UPK3B-205ENST00000490360 SMIM15Q7Z3B0 74 aa11.99□□□□□ -0.49
UPK3B-205ENST00000490360 PRR26Q8N8Z3 221 aa11.99□□□□□ -0.49
UPK3B-205ENST00000490360 IGLV1-50A0A075B6I6 118 aa11.98□□□□□ -0.49
UPK3B-205ENST00000490360 SDHAF1A6NFY7 115 aa11.98□□□□□ -0.49
UPK3B-205ENST00000490360 I3L3M4 83 aa11.98□□□□□ -0.49
UPK3B-205ENST00000490360 APOMO95445 188 aa11.98□□□□□ -0.49
UPK3B-205ENST00000490360 C9orf116Q5BN46 136 aaPredicted RBP11.98□□□□□ -0.49
UPK3B-205ENST00000490360 TSKUQ8WUA8 353 aa11.98□□□□□ -0.49
UPK3B-205ENST00000490360 G3V3Q6 166 aa11.96□□□□□ -0.49
UPK3B-205ENST00000490360 PMCHP20382 165 aa11.96□□□□□ -0.49
UPK3B-205ENST00000490360 MALP21145 153 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms