RNA–Protein interactions for RNA: ENST00000489944.1

SEMA6C-208, Transcript of semaphorin 6C, humanhuman

TSL 3

Gene SEMA6C, Length 423 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-208ENST00000489944 LINC00528Q8N1L1 170 aa7.74□□□□□ -1.17
SEMA6C-208ENST00000489944 C9orf163Q8N9P6 203 aa7.74□□□□□ -1.17
SEMA6C-208ENST00000489944 BORCS7Q96B45 105 aa7.74□□□□□ -1.17
SEMA6C-208ENST00000489944 GFRA4Q9GZZ7 299 aa7.74□□□□□ -1.17
SEMA6C-208ENST00000489944 DNAH8Q96JB1 4490 aa7.74□□□□□ -1.17
SEMA6C-208ENST00000489944 K7EN84 100 aa7.73□□□□□ -1.17
SEMA6C-208ENST00000489944 GATCO43716 136 aaKnown RBP7.73□□□□□ -1.17
SEMA6C-208ENST00000489944 HLA-DQA1P01909 254 aa7.73□□□□□ -1.17
SEMA6C-208ENST00000489944 AMTP48728 403 aa7.73□□□□□ -1.17
SEMA6C-208ENST00000489944 CNBPP62633 177 aaKnown RBP7.73□□□□□ -1.17
SEMA6C-208ENST00000489944 CFAP161Q6P656 301 aa7.73□□□□□ -1.17
SEMA6C-208ENST00000489944 KRTAP26-1Q6PEX3 210 aa7.73□□□□□ -1.17
SEMA6C-208ENST00000489944 SCXQ7RTU7 201 aa7.73□□□□□ -1.17
SEMA6C-208ENST00000489944 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.72□□□□□ -1.17
SEMA6C-208ENST00000489944 TRBV6-5A0A0K0K1A5 114 aa7.72□□□□□ -1.17
SEMA6C-208ENST00000489944 C20orf203Q8NBC4 194 aa7.72□□□□□ -1.17
SEMA6C-208ENST00000489944 RNASE7Q9H1E1 156 aaKnown RBP7.72□□□□□ -1.17
SEMA6C-208ENST00000489944 PPP1R17O96001 155 aa7.71□□□□□ -1.18
SEMA6C-208ENST00000489944 ZNF25P17030 456 aaPredicted RBP7.71□□□□□ -1.18
SEMA6C-208ENST00000489944 FAM74A3Q4VXF1 159 aa7.71□□□□□ -1.18
SEMA6C-208ENST00000489944 ALKAL2Q6UX46 152 aa7.71□□□□□ -1.18
SEMA6C-208ENST00000489944 GATD1Q8NB37 220 aa7.71□□□□□ -1.18
SEMA6C-208ENST00000489944 CIRBP-AS1Q8TBR5 109 aa7.71□□□□□ -1.18
SEMA6C-208ENST00000489944 RNF185Q96GF1 192 aa7.71□□□□□ -1.18
SEMA6C-208ENST00000489944 AP5S1Q9NUS5 200 aa7.71□□□□□ -1.18
SEMA6C-208ENST00000489944 KRTAP29-1A8MX34 341 aaPredicted RBP7.7□□□□□ -1.18
SEMA6C-208ENST00000489944 PRSS1P07477 247 aa7.7□□□□□ -1.18
SEMA6C-208ENST00000489944 TSKUQ8WUA8 353 aa7.7□□□□□ -1.18
SEMA6C-208ENST00000489944 GTSF1Q8WW33 167 aa7.7□□□□□ -1.18
SEMA6C-208ENST00000489944 SMIM7Q9BQ49 75 aa7.7□□□□□ -1.18
SEMA6C-208ENST00000489944 EIF5A2Q9GZV4 153 aaKnown RBP7.7□□□□□ -1.18
SEMA6C-208ENST00000489944 OSTCQ9NRP0 149 aa7.7□□□□□ -1.18
SEMA6C-208ENST00000489944 PKIGQ9Y2B9 76 aa7.7□□□□□ -1.18
SEMA6C-208ENST00000489944 APCSP02743 223 aa7.69□□□□□ -1.18
SEMA6C-208ENST00000489944 HAMPP81172 84 aa7.69□□□□□ -1.18
SEMA6C-208ENST00000489944 SMAGPQ0VAQ4 97 aa7.69□□□□□ -1.18
SEMA6C-208ENST00000489944 AMMECR1LQ6DCA0 310 aa7.69□□□□□ -1.18
SEMA6C-208ENST00000489944 TMEM191AQ9H0A3 160 aa7.69□□□□□ -1.18
SEMA6C-208ENST00000489944 SMDT1Q9H4I9 107 aa7.69□□□□□ -1.18
SEMA6C-208ENST00000489944 MYCBP2O75592 4640 aa7.69□□□□□ -1.18
SEMA6C-208ENST00000489944 HERC1Q15751 4861 aa7.68□□□□□ -1.18
SEMA6C-208ENST00000489944 IGLV4-60A0A075B6I1 120 aa7.68□□□□□ -1.18
SEMA6C-208ENST00000489944 A0A1B0GUT8 65 aa7.68□□□□□ -1.18
SEMA6C-208ENST00000489944 I3L3M4 83 aa7.68□□□□□ -1.18
SEMA6C-208ENST00000489944 CIRBPQ14011 172 aaKnown RBP7.68□□□□□ -1.18
SEMA6C-208ENST00000489944 LINC01551Q86U37 167 aa7.68□□□□□ -1.18
SEMA6C-208ENST00000489944 MRAP2Q96G30 205 aa7.68□□□□□ -1.18
SEMA6C-208ENST00000489944 FLG2Q5D862 2391 aaPredicted RBP7.68□□□□□ -1.18
SEMA6C-208ENST00000489944 IGHV3-64A0A075B6Q5 118 aa7.67□□□□□ -1.18
SEMA6C-208ENST00000489944 SDHAF1A6NFY7 115 aa7.67□□□□□ -1.18
SEMA6C-208ENST00000489944 ZNF727A8MUV8 499 aa7.67□□□□□ -1.18
SEMA6C-208ENST00000489944 J3QL48 77 aa7.67□□□□□ -1.18
SEMA6C-208ENST00000489944 OXTP01178 125 aa7.67□□□□□ -1.18
SEMA6C-208ENST00000489944 LINC01620Q4KN68 170 aa7.67□□□□□ -1.18
SEMA6C-208ENST00000489944 CLPSL2Q6UWE3 100 aa7.67□□□□□ -1.18
SEMA6C-208ENST00000489944 SDIM1Q6ZPB5 146 aa7.67□□□□□ -1.18
SEMA6C-208ENST00000489944 BTF3L4Q96K17 158 aa7.67□□□□□ -1.18
SEMA6C-208ENST00000489944 hDV102S1A0JD36 115 aa7.66□□□□□ -1.18
SEMA6C-208ENST00000489944 HIGD1CA8MV81 97 aa7.66□□□□□ -1.18
SEMA6C-208ENST00000489944 CCL25O15444 150 aa7.66□□□□□ -1.18
SEMA6C-208ENST00000489944 PMCHP20382 165 aa7.66□□□□□ -1.18
SEMA6C-208ENST00000489944 TMEM101Q96IK0 257 aa7.66□□□□□ -1.18
SEMA6C-208ENST00000489944 ST20Q9HBF5 79 aa7.66□□□□□ -1.18
SEMA6C-208ENST00000489944 IGLV10-54A0A075B6I4 117 aa7.65□□□□□ -1.18
SEMA6C-208ENST00000489944 TRBV27A0A0K0K1C4 114 aa7.65□□□□□ -1.18
SEMA6C-208ENST00000489944 A0A1B0GW15 77 aa7.65□□□□□ -1.18
SEMA6C-208ENST00000489944 TCAPO15273 167 aa7.65□□□□□ -1.18
SEMA6C-208ENST00000489944 RIGQ13278 110 aa7.65□□□□□ -1.18
SEMA6C-208ENST00000489944 MRPL52Q86TS9 123 aaKnown RBP7.65□□□□□ -1.18
SEMA6C-208ENST00000489944 OR5A1Q8NGJ0 315 aa7.65□□□□□ -1.18
SEMA6C-208ENST00000489944 TRAV26-2A0A0B4J265 109 aa7.64□□□□□ -1.19
SEMA6C-208ENST00000489944 PPP1R2P9O14990 202 aa7.64□□□□□ -1.19
SEMA6C-208ENST00000489944 SRP19P09132 144 aaKnown RBP7.64□□□□□ -1.19
SEMA6C-208ENST00000489944 FGF6P10767 208 aa7.64□□□□□ -1.19
SEMA6C-208ENST00000489944 ESDP10768 282 aa7.64□□□□□ -1.19
SEMA6C-208ENST00000489944 CEBPGP53567 150 aa7.64□□□□□ -1.19
SEMA6C-208ENST00000489944 TMEM241Q24JQ0 296 aa7.64□□□□□ -1.19
SEMA6C-208ENST00000489944 NAT8BQ9UHF3 227 aa7.64□□□□□ -1.19
SEMA6C-208ENST00000489944 hCG_2014768A0A024R1R8 64 aa7.63□□□□□ -1.19
SEMA6C-208ENST00000489944 LINC00862A6NCI5 91 aa7.63□□□□□ -1.19
SEMA6C-208ENST00000489944 VCYO14598 125 aa7.63□□□□□ -1.19
SEMA6C-208ENST00000489944 S100A8P05109 93 aa7.63□□□□□ -1.19
SEMA6C-208ENST00000489944 POLR2KP53803 58 aaKnown RBP7.63□□□□□ -1.19
SEMA6C-208ENST00000489944 KRTAP10-4P60372 401 aaPredicted RBP7.63□□□□□ -1.19
SEMA6C-208ENST00000489944 RPL37AP61513 92 aaKnown RBP7.63□□□□□ -1.19
SEMA6C-208ENST00000489944 RNASEKQ6P5S7 137 aaKnown RBP7.63□□□□□ -1.19
SEMA6C-208ENST00000489944 RPL39LQ96EH5 51 aaKnown RBP7.63□□□□□ -1.19
SEMA6C-208ENST00000489944 LINC00474Q9P2X8 69 aa7.63□□□□□ -1.19
SEMA6C-208ENST00000489944 CSDC2Q9Y534 153 aaKnown RBP7.63□□□□□ -1.19
SEMA6C-208ENST00000489944 GVQW2A0A096LPI5 108 aaPredicted RBP7.62□□□□□ -1.19
SEMA6C-208ENST00000489944 GAGE12HA6NDE8 117 aa7.62□□□□□ -1.19
SEMA6C-208ENST00000489944 RAB4AP20338 218 aa7.62□□□□□ -1.19
SEMA6C-208ENST00000489944 RPS10P46783 165 aaKnown RBP7.62□□□□□ -1.19
SEMA6C-208ENST00000489944 PEA15Q15121 130 aa7.62□□□□□ -1.19
SEMA6C-208ENST00000489944 CHCHD10Q8WYQ3 142 aaPredicted RBP7.62□□□□□ -1.19
SEMA6C-208ENST00000489944 NAT8Q9UHE5 227 aa7.62□□□□□ -1.19
SEMA6C-208ENST00000489944 V9GYV3 84 aa7.62□□□□□ -1.19
SEMA6C-208ENST00000489944 C7orf77A4D0Y5 90 aa7.61□□□□□ -1.19
SEMA6C-208ENST00000489944 SS18Q15532 418 aa7.61□□□□□ -1.19
SEMA6C-208ENST00000489944 SERTAD4-AS1Q5TG53 156 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms