RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 NMUP48645 174 aa8.39□□□□□ -1.07
TRIM40-208ENST00000489892 GTF2H5Q6ZYL4 71 aa8.39□□□□□ -1.07
TRIM40-208ENST00000489892 NOP10Q9NPE3 64 aaKnown RBP8.39□□□□□ -1.07
TRIM40-208ENST00000489892 DKK2Q9UBU2 259 aa8.39□□□□□ -1.07
TRIM40-208ENST00000489892 X6R8D5 127 aa8.39□□□□□ -1.07
TRIM40-208ENST00000489892 TRGV2A0A075B6R0 118 aa8.38□□□□□ -1.07
TRIM40-208ENST00000489892 TRAV4A0A0B4J268 109 aa8.38□□□□□ -1.07
TRIM40-208ENST00000489892 ZNF56Q15929 161 aa8.38□□□□□ -1.07
TRIM40-208ENST00000489892 FAM74A4Q5TZK3 123 aa8.38□□□□□ -1.07
TRIM40-208ENST00000489892 MRPL16Q9NX20 251 aaKnown RBP8.38□□□□□ -1.07
TRIM40-208ENST00000489892 CBY1Q9Y3M2 126 aa8.38□□□□□ -1.07
TRIM40-208ENST00000489892 KIF25-AS1Q9Y6Z4 181 aa8.38□□□□□ -1.07
TRIM40-208ENST00000489892 TENM3Q9P273 2699 aa8.37□□□□□ -1.07
TRIM40-208ENST00000489892 TRBV6-5A0A0K0K1A5 114 aa8.37□□□□□ -1.07
TRIM40-208ENST00000489892 C9orf118A6NHY6 69 aa8.37□□□□□ -1.07
TRIM40-208ENST00000489892 CCL25O15444 150 aa8.37□□□□□ -1.07
TRIM40-208ENST00000489892 RS1O15537 224 aa8.37□□□□□ -1.07
TRIM40-208ENST00000489892 CRYGDP07320 174 aa8.37□□□□□ -1.07
TRIM40-208ENST00000489892 GATA1P15976 413 aaPredicted RBP8.37□□□□□ -1.07
TRIM40-208ENST00000489892 ZC2HC1BQ5TFG8 222 aa8.37□□□□□ -1.07
TRIM40-208ENST00000489892 CFAP126Q5VTH2 177 aa8.37□□□□□ -1.07
TRIM40-208ENST00000489892 SPATA25Q9BR10 227 aa8.37□□□□□ -1.07
TRIM40-208ENST00000489892 EDA2RQ9HAV5 297 aa8.37□□□□□ -1.07
TRIM40-208ENST00000489892 HHLA3Q9XRX5 114 aa8.37□□□□□ -1.07
TRIM40-208ENST00000489892 DNAH3Q8TD57 4116 aa8.36□□□□□ -1.07
TRIM40-208ENST00000489892 COL7A1Q02388 2944 aa8.36□□□□□ -1.07
TRIM40-208ENST00000489892 A0A087WWL8 130 aa8.36□□□□□ -1.07
TRIM40-208ENST00000489892 PLAC8L1A1L4L8 177 aa8.36□□□□□ -1.07
TRIM40-208ENST00000489892 GAS8-AS1O95177 125 aa8.36□□□□□ -1.07
TRIM40-208ENST00000489892 ERASQ7Z444 233 aa8.36□□□□□ -1.07
TRIM40-208ENST00000489892 SCGB3A1Q96QR1 104 aa8.36□□□□□ -1.07
TRIM40-208ENST00000489892 CYSLTR1Q9Y271 337 aa8.36□□□□□ -1.07
TRIM40-208ENST00000489892 HYDINQ4G0P3 5121 aa8.36□□□□□ -1.07
TRIM40-208ENST00000489892 TRAV26-2A0A0B4J265 109 aa8.35□□□□□ -1.07
TRIM40-208ENST00000489892 IGHV4-28A0A0C4DH34 117 aa8.35□□□□□ -1.07
TRIM40-208ENST00000489892 PRM2P04554 102 aa8.35□□□□□ -1.07
TRIM40-208ENST00000489892 SPART-AS1P0CW21 52 aa8.35□□□□□ -1.07
TRIM40-208ENST00000489892 EMP1P54849 157 aa8.35□□□□□ -1.07
TRIM40-208ENST00000489892 LINC00315P59091 139 aa8.35□□□□□ -1.07
TRIM40-208ENST00000489892 C2orf66Q6UXQ4 117 aa8.35□□□□□ -1.07
TRIM40-208ENST00000489892 Q6ZTI0 123 aa8.35□□□□□ -1.07
TRIM40-208ENST00000489892 Q8NAQ8 132 aa8.35□□□□□ -1.07
TRIM40-208ENST00000489892 OR5A1Q8NGJ0 315 aa8.35□□□□□ -1.07
TRIM40-208ENST00000489892 TMEM141Q96I45 108 aa8.35□□□□□ -1.07
TRIM40-208ENST00000489892 KIR2DL4Q99706 377 aa8.35□□□□□ -1.07
TRIM40-208ENST00000489892 CHAC1Q9BUX1 264 aa8.35□□□□□ -1.07
TRIM40-208ENST00000489892 C11orf68Q9H3H3 251 aaKnown RBP8.35□□□□□ -1.07
TRIM40-208ENST00000489892 MRPL35Q9NZE8 188 aaKnown RBP8.35□□□□□ -1.07
TRIM40-208ENST00000489892 CHTOPQ9Y3Y2 248 aaKnown RBP8.35□□□□□ -1.07
TRIM40-208ENST00000489892 TRBV10-1A0A0K0K1A3 114 aa8.34□□□□□ -1.07
TRIM40-208ENST00000489892 K7EIL1 84 aa8.34□□□□□ -1.07
TRIM40-208ENST00000489892 VCYO14598 125 aa8.34□□□□□ -1.07
TRIM40-208ENST00000489892 IGHV3-53P01767 116 aa8.34□□□□□ -1.07
TRIM40-208ENST00000489892 RHOHQ15669 191 aa8.34□□□□□ -1.07
TRIM40-208ENST00000489892 DEFB121Q5J5C9 76 aa8.34□□□□□ -1.07
TRIM40-208ENST00000489892 SUMO4Q6EEV6 95 aa8.34□□□□□ -1.07
TRIM40-208ENST00000489892 UFSP1Q6NVU6 142 aa8.34□□□□□ -1.07
TRIM40-208ENST00000489892 LINC00612Q8N6U2 182 aa8.34□□□□□ -1.07
TRIM40-208ENST00000489892 NEXN-AS1Q8NBZ9 246 aa8.34□□□□□ -1.07
TRIM40-208ENST00000489892 DNAJC30Q96LL9 226 aa8.34□□□□□ -1.07
TRIM40-208ENST00000489892 TIMM17AQ99595 171 aa8.34□□□□□ -1.07
TRIM40-208ENST00000489892 JPT2Q9H910 190 aa8.34□□□□□ -1.07
TRIM40-208ENST00000489892 TP73-AS1Q9UF72 201 aa8.34□□□□□ -1.07
TRIM40-208ENST00000489892 GAGE12BA1L429 117 aa8.33□□□□□ -1.08
TRIM40-208ENST00000489892 M0QY20 66 aa8.33□□□□□ -1.08
TRIM40-208ENST00000489892 GAGE7O76087 117 aa8.33□□□□□ -1.08
TRIM40-208ENST00000489892 GAGE12FP0CL80 117 aa8.33□□□□□ -1.08
TRIM40-208ENST00000489892 GAGE12GP0CL81 117 aa8.33□□□□□ -1.08
TRIM40-208ENST00000489892 GAGE12IP0CL82 117 aa8.33□□□□□ -1.08
TRIM40-208ENST00000489892 SMIM13P0DJ93 91 aa8.33□□□□□ -1.08
TRIM40-208ENST00000489892 HERVK_113P61574 105 aa8.33□□□□□ -1.08
TRIM40-208ENST00000489892 PCP2Q8IVA1 136 aa8.33□□□□□ -1.08
TRIM40-208ENST00000489892 TM2D2Q9BX73 214 aa8.33□□□□□ -1.08
TRIM40-208ENST00000489892 TRBV25-1A0A075B6N4 114 aa8.32□□□□□ -1.08
TRIM40-208ENST00000489892 E9PLD3 99 aa8.32□□□□□ -1.08
TRIM40-208ENST00000489892 POLR2KP53803 58 aaKnown RBP8.32□□□□□ -1.08
TRIM40-208ENST00000489892 DAD1P61803 113 aa8.32□□□□□ -1.08
TRIM40-208ENST00000489892 FAM222AQ5U5X8 452 aa8.32□□□□□ -1.08
TRIM40-208ENST00000489892 TM2D3Q9BRN9 247 aa8.32□□□□□ -1.08
TRIM40-208ENST00000489892 TNFRSF18Q9Y5U5 241 aa8.32□□□□□ -1.08
TRIM40-208ENST00000489892 TRGV4A0A0C4DH28 118 aa8.31□□□□□ -1.08
TRIM40-208ENST00000489892 TRBV27A0A0K0K1C4 114 aa8.31□□□□□ -1.08
TRIM40-208ENST00000489892 TRBV6-4A0A1B0GX49 114 aa8.31□□□□□ -1.08
TRIM40-208ENST00000489892 GAGE10A6NGK3 116 aa8.31□□□□□ -1.08
TRIM40-208ENST00000489892 K7EP34 96 aa8.31□□□□□ -1.08
TRIM40-208ENST00000489892 DEFB130BP0DP73 79 aa8.31□□□□□ -1.08
TRIM40-208ENST00000489892 DEFB130AP0DP74 79 aa8.31□□□□□ -1.08
TRIM40-208ENST00000489892 AMMECR1LQ6DCA0 310 aa8.31□□□□□ -1.08
TRIM40-208ENST00000489892 CEND1Q8N111 149 aa8.31□□□□□ -1.08
TRIM40-208ENST00000489892 BAALCQ8WXS3 180 aa8.31□□□□□ -1.08
TRIM40-208ENST00000489892 RPL39LQ96EH5 51 aaKnown RBP8.31□□□□□ -1.08
TRIM40-208ENST00000489892 PRADC1Q9BSG0 188 aa8.31□□□□□ -1.08
TRIM40-208ENST00000489892 IGKV2D-26A0A0A0MRZ7 120 aa8.3□□□□□ -1.08
TRIM40-208ENST00000489892 TRAV8-6A0A0B4J262 113 aa8.3□□□□□ -1.08
TRIM40-208ENST00000489892 TMEM238LA0A1B0GVL6 79 aa8.3□□□□□ -1.08
TRIM40-208ENST00000489892 A6NJY4 79 aa8.3□□□□□ -1.08
TRIM40-208ENST00000489892 K7EQD1 137 aa8.3□□□□□ -1.08
TRIM40-208ENST00000489892 FABP2P12104 132 aa8.3□□□□□ -1.08
TRIM40-208ENST00000489892 RPL36AP83881 106 aaKnown RBP8.3□□□□□ -1.08
TRIM40-208ENST00000489892 RPL36ALQ969Q0 106 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms