RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 ASH1LQ9NR48 2969 aaKnown RBP3.53□□□□□ -1.84
SNRNP40-206ENST00000489853 FAM208BQ5VWN6 2430 aa3.53□□□□□ -1.84
SNRNP40-206ENST00000489853 CNOT1A5YKK6 2376 aaKnown RBP3.53□□□□□ -1.84
SNRNP40-206ENST00000489853 IGLV3-9A0A075B6K5 115 aa3.53□□□□□ -1.84
SNRNP40-206ENST00000489853 FHL2Q14192 279 aa3.53□□□□□ -1.84
SNRNP40-206ENST00000489853 C1orf195Q5TG92 126 aa3.53□□□□□ -1.84
SNRNP40-206ENST00000489853 C9orf139Q6ZV77 190 aa3.53□□□□□ -1.84
SNRNP40-206ENST00000489853 RNF182Q8N6D2 247 aa3.53□□□□□ -1.84
SNRNP40-206ENST00000489853 COPS9Q8WXC6 57 aa3.53□□□□□ -1.84
SNRNP40-206ENST00000489853 TMEM243Q9BU79 118 aa3.53□□□□□ -1.84
SNRNP40-206ENST00000489853 PHLDA3Q9Y5J5 127 aa3.53□□□□□ -1.84
SNRNP40-206ENST00000489853 PRRC2AP48634 2157 aaKnown RBP3.53□□□□□ -1.84
SNRNP40-206ENST00000489853 HELZ2Q9BYK8 2649 aaKnown RBP3.53□□□□□ -1.84
SNRNP40-206ENST00000489853 TRGV5A0A0B4J1U4 118 aa3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 IGHV1-3A0A0C4DH29 117 aa3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 TRBV6-5A0A0K0K1A5 114 aa3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 TRBV27A0A0K0K1C4 114 aa3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 FAM236DA0A1B0GTK5 79 aa3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 A8MZ25 164 aa3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 IGHV1-46P01743 117 aa3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 FAM236CP0DP71 79 aa3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 CCL4P13236 92 aa3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 S100A4P26447 101 aaKnown RBP3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 LINC00315P59091 139 aa3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 BEAN1Q3B7T3 259 aa3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 LINC01561Q8N1V8 128 aa3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 DEFB127Q9H1M4 99 aa3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 C16orf95Q9H693 158 aa3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 NDUFA12Q9UI09 145 aa3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 C22orf24Q9Y442 160 aa3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 NACAE9PAV3 2078 aa3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 MAST4O15021 2626 aa3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 TENM4Q6N022 2769 aa3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 IGLV11-55A0A075B6I3 123 aa3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 TRAV21A0A0B4J279 112 aa3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 IGHV1-58A0A0C4DH39 117 aa3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 A0A0J9YXV3 536 aa3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 FAM223BA6NKX1 122 aa3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 M0R1W7 72 aa3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 NDUFB3O43676 98 aa3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 BCE1O60756 84 aa3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 IGHG2P01859 326 aa3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 CTSGP08311 255 aa3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 Q6ZSN1 163 aa3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 Q6ZSV7 163 aa3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 C20orf173Q96LM9 149 aa3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 SPRR3Q9UBC9 169 aa3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 UBE2D4Q9Y2X8 147 aa3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 KIF25-AS1Q9Y6Z4 181 aa3.52□□□□□ -1.85
SNRNP40-206ENST00000489853 CFAP46Q8IYW2 2715 aa3.51□□□□□ -1.85
SNRNP40-206ENST00000489853 IGHV3-64A0A075B6Q5 118 aa3.51□□□□□ -1.85
SNRNP40-206ENST00000489853 A0A0A0MQY5 61 aa3.51□□□□□ -1.85
SNRNP40-206ENST00000489853 TRAV12-3A0A0B4J271 114 aa3.51□□□□□ -1.85
SNRNP40-206ENST00000489853 IGKV3D-7A0A0C4DH55 119 aa3.51□□□□□ -1.85
SNRNP40-206ENST00000489853 KNCNA6PVL3 124 aa3.51□□□□□ -1.85
SNRNP40-206ENST00000489853 NXPH4O95158 308 aa3.51□□□□□ -1.85
SNRNP40-206ENST00000489853 DNAL4O96015 105 aa3.51□□□□□ -1.85
SNRNP40-206ENST00000489853 IGHV1-8P0DP01 117 aa3.51□□□□□ -1.85
SNRNP40-206ENST00000489853 CNEP1R1Q8N9A8 125 aa3.51□□□□□ -1.85
SNRNP40-206ENST00000489853 VSIG2Q96IQ7 327 aa3.51□□□□□ -1.85
SNRNP40-206ENST00000489853 SLC25A15Q9Y619 301 aa3.51□□□□□ -1.85
SNRNP40-206ENST00000489853 RBMY1BA6NDE4 496 aaKnown RBP3.5□□□□□ -1.85
SNRNP40-206ENST00000489853 RBMY1EA6NEQ0 496 aaKnown RBP3.5□□□□□ -1.85
SNRNP40-206ENST00000489853 BUB1B-PAK6H3BSN5 160 aa3.5□□□□□ -1.85
SNRNP40-206ENST00000489853 IGLV1-47P01700 117 aa3.5□□□□□ -1.85
SNRNP40-206ENST00000489853 RBMY1DP0C7P1 496 aaKnown RBP3.5□□□□□ -1.85
SNRNP40-206ENST00000489853 RBMY1A1P0DJD3 496 aaKnown RBP3.5□□□□□ -1.85
SNRNP40-206ENST00000489853 RBMY1CP0DJD4 496 aa3.5□□□□□ -1.85
SNRNP40-206ENST00000489853 RNASE4P34096 147 aaKnown RBP3.5□□□□□ -1.85
SNRNP40-206ENST00000489853 XCL1P47992 114 aa3.5□□□□□ -1.85
SNRNP40-206ENST00000489853 CIRBPQ14011 172 aaKnown RBP3.5□□□□□ -1.85
SNRNP40-206ENST00000489853 RBMY1FQ15415 496 aaKnown RBP3.5□□□□□ -1.85
SNRNP40-206ENST00000489853 NUP37Q8NFH4 326 aa3.5□□□□□ -1.85
SNRNP40-206ENST00000489853 SAP25Q8TEE9 199 aa3.5□□□□□ -1.85
SNRNP40-206ENST00000489853 OBSCN-AS1Q96MR7 158 aa3.5□□□□□ -1.85
SNRNP40-206ENST00000489853 OPRPNQ99935 248 aaPredicted RBP3.5□□□□□ -1.85
SNRNP40-206ENST00000489853 XCL2Q9UBD3 114 aa3.5□□□□□ -1.85
SNRNP40-206ENST00000489853 S4R3C0 116 aa3.5□□□□□ -1.85
SNRNP40-206ENST00000489853 RAI1Q7Z5J4 1906 aaPredicted RBP3.5□□□□□ -1.85
SNRNP40-206ENST00000489853 TMEM178BH3BS89 294 aa3.5□□□□□ -1.85
SNRNP40-206ENST00000489853 NBR2O15453 112 aa3.5□□□□□ -1.85
SNRNP40-206ENST00000489853 S100A7L2Q5SY68 101 aa3.5□□□□□ -1.85
SNRNP40-206ENST00000489853 ATP5EP2Q5VTU8 51 aa3.5□□□□□ -1.85
SNRNP40-206ENST00000489853 SUMO4Q6EEV6 95 aa3.5□□□□□ -1.85
SNRNP40-206ENST00000489853 FAM223AQ8IWN6 122 aa3.5□□□□□ -1.85
SNRNP40-206ENST00000489853 C20orf203Q8NBC4 194 aa3.5□□□□□ -1.85
SNRNP40-206ENST00000489853 MDS2Q8NDY4 140 aa3.5□□□□□ -1.85
SNRNP40-206ENST00000489853 OVOL2Q9BRP0 275 aa3.5□□□□□ -1.85
SNRNP40-206ENST00000489853 MALRD1Q5VYJ5 2156 aa3.49□□□□□ -1.85
SNRNP40-206ENST00000489853 KALRNO60229 2985 aa3.49□□□□□ -1.85
SNRNP40-206ENST00000489853 IGLV4-3A0A075B6K6 122 aa3.49□□□□□ -1.85
SNRNP40-206ENST00000489853 A0A087WVE0 104 aa3.49□□□□□ -1.85
SNRNP40-206ENST00000489853 M0R1B8 84 aa3.49□□□□□ -1.85
SNRNP40-206ENST00000489853 LOXP28300 417 aaPredicted RBP3.49□□□□□ -1.85
SNRNP40-206ENST00000489853 FAM27E3Q08E93 113 aa3.49□□□□□ -1.85
SNRNP40-206ENST00000489853 PRR9Q5T870 116 aa3.49□□□□□ -1.85
SNRNP40-206ENST00000489853 SERTAD4-AS1Q5TG53 156 aa3.49□□□□□ -1.85
SNRNP40-206ENST00000489853 FP248Q71RG6 208 aaPredicted RBP3.49□□□□□ -1.85
SNRNP40-206ENST00000489853 ZFAND2AQ8N6M9 145 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms