RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 CRPP02741 224 aa12.64□□□□□ -0.39
EPHB4-207ENST00000489808 KRTAP10-1P60331 282 aa12.64□□□□□ -0.39
EPHB4-207ENST00000489808 RNF185Q96GF1 192 aa12.64□□□□□ -0.39
EPHB4-207ENST00000489808 SMIM27A0A1W2PRY6 76 aa12.63□□□□□ -0.39
EPHB4-207ENST00000489808 LECT2O14960 151 aa12.63□□□□□ -0.39
EPHB4-207ENST00000489808 RAB4AP20338 218 aa12.63□□□□□ -0.39
EPHB4-207ENST00000489808 LINC00269Q8N2A0 174 aa12.63□□□□□ -0.39
EPHB4-207ENST00000489808 PRR34Q9NV39 138 aa12.63□□□□□ -0.39
EPHB4-207ENST00000489808 TRBV6-5A0A0K0K1A5 114 aa12.62□□□□□ -0.39
EPHB4-207ENST00000489808 A0A1B0GUV1 79 aa12.62□□□□□ -0.39
EPHB4-207ENST00000489808 C1orf43Q9BWL3 253 aa12.62□□□□□ -0.39
EPHB4-207ENST00000489808 DNAH8Q96JB1 4490 aa12.61□□□□□ -0.39
EPHB4-207ENST00000489808 SDHAF1A6NFY7 115 aa12.61□□□□□ -0.39
EPHB4-207ENST00000489808 GAS8-AS1O95177 125 aa12.61□□□□□ -0.39
EPHB4-207ENST00000489808 AMTP48728 403 aa12.61□□□□□ -0.39
EPHB4-207ENST00000489808 MIAQ16674 131 aa12.61□□□□□ -0.39
EPHB4-207ENST00000489808 AMN1Q8IY45 258 aa12.61□□□□□ -0.39
EPHB4-207ENST00000489808 KRTAP17-1Q9BYP8 105 aa12.61□□□□□ -0.39
EPHB4-207ENST00000489808 NCR2O95944 276 aa12.6□□□□□ -0.39
EPHB4-207ENST00000489808 CLLU1Q5K131 121 aa12.6□□□□□ -0.39
EPHB4-207ENST00000489808 C20orf203Q8NBC4 194 aa12.6□□□□□ -0.39
EPHB4-207ENST00000489808 MRAP2Q96G30 205 aa12.6□□□□□ -0.39
EPHB4-207ENST00000489808 IGLV4-60A0A075B6I1 120 aa12.59□□□□□ -0.39
EPHB4-207ENST00000489808 UBE2L6O14933 153 aa12.59□□□□□ -0.39
EPHB4-207ENST00000489808 ST20Q9HBF5 79 aa12.59□□□□□ -0.39
EPHB4-207ENST00000489808 I3L3M4 83 aa12.58□□□□□ -0.4
EPHB4-207ENST00000489808 PMCHP20382 165 aa12.58□□□□□ -0.4
EPHB4-207ENST00000489808 XGP55808 180 aa12.58□□□□□ -0.4
EPHB4-207ENST00000489808 IFITM2Q01629 132 aa12.58□□□□□ -0.4
EPHB4-207ENST00000489808 CLPSL2Q6UWE3 100 aa12.58□□□□□ -0.4
EPHB4-207ENST00000489808 RPS10P46783 165 aaKnown RBP12.57□□□□□ -0.4
EPHB4-207ENST00000489808 REG3AQ06141 175 aa12.57□□□□□ -0.4
EPHB4-207ENST00000489808 TMEM70Q9BUB7 260 aa12.57□□□□□ -0.4
EPHB4-207ENST00000489808 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.56□□□□□ -0.4
EPHB4-207ENST00000489808 A0A1B0GW15 77 aa12.56□□□□□ -0.4
EPHB4-207ENST00000489808 CAMPP49913 170 aa12.56□□□□□ -0.4
EPHB4-207ENST00000489808 POLR2KP53803 58 aaKnown RBP12.56□□□□□ -0.4
EPHB4-207ENST00000489808 FAM104BQ5XKR9 115 aa12.56□□□□□ -0.4
EPHB4-207ENST00000489808 KRTAP26-1Q6PEX3 210 aa12.56□□□□□ -0.4
EPHB4-207ENST00000489808 KRTAP4-5Q9BYR2 181 aa12.56□□□□□ -0.4
EPHB4-207ENST00000489808 SMKR1H3BMG3 65 aa12.55□□□□□ -0.4
EPHB4-207ENST00000489808 APCSP02743 223 aa12.55□□□□□ -0.4
EPHB4-207ENST00000489808 Q8N1X5 172 aa12.55□□□□□ -0.4
EPHB4-207ENST00000489808 FAT1Q14517 4588 aa12.54□□□□□ -0.4
EPHB4-207ENST00000489808 H7C423 109 aa12.54□□□□□ -0.4
EPHB4-207ENST00000489808 PPP1R2P9O14990 202 aa12.54□□□□□ -0.4
EPHB4-207ENST00000489808 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.53□□□□□ -0.4
EPHB4-207ENST00000489808 TRAV8-4A0A0B4J246 113 aa12.53□□□□□ -0.4
EPHB4-207ENST00000489808 TRBV27A0A0K0K1C4 114 aa12.53□□□□□ -0.4
EPHB4-207ENST00000489808 IGKV2-29A2NJV5 120 aaPredicted RBP12.53□□□□□ -0.4
EPHB4-207ENST00000489808 PPP1R17O96001 155 aa12.53□□□□□ -0.4
EPHB4-207ENST00000489808 TSHBP01222 138 aa12.53□□□□□ -0.4
EPHB4-207ENST00000489808 PNRC1Q12796 327 aaPredicted RBP12.53□□□□□ -0.4
EPHB4-207ENST00000489808 MRPL51Q4U2R6 128 aaKnown RBP12.53□□□□□ -0.4
EPHB4-207ENST00000489808 NRACQ8N912 160 aa12.53□□□□□ -0.4
EPHB4-207ENST00000489808 PCLOQ9Y6V0 5065 aa12.53□□□□□ -0.4
EPHB4-207ENST00000489808 ABCA13Q86UQ4 5058 aa12.52□□□□□ -0.4
EPHB4-207ENST00000489808 IGLV10-54A0A075B6I4 117 aa12.52□□□□□ -0.41
EPHB4-207ENST00000489808 VCYO14598 125 aa12.52□□□□□ -0.41
EPHB4-207ENST00000489808 HLA-DQA1P01909 254 aa12.52□□□□□ -0.41
EPHB4-207ENST00000489808 ESDP10768 282 aa12.52□□□□□ -0.41
EPHB4-207ENST00000489808 C14orf177Q52M58 125 aa12.52□□□□□ -0.41
EPHB4-207ENST00000489808 A0A1B0GXF2 115 aa12.51□□□□□ -0.41
EPHB4-207ENST00000489808 LINC00862A6NCI5 91 aa12.51□□□□□ -0.41
EPHB4-207ENST00000489808 S100A8P05109 93 aa12.51□□□□□ -0.41
EPHB4-207ENST00000489808 HBBP68871 147 aa12.51□□□□□ -0.41
EPHB4-207ENST00000489808 AMMECR1LQ6DCA0 310 aa12.51□□□□□ -0.41
EPHB4-207ENST00000489808 MRPL54Q6P161 138 aaKnown RBP12.51□□□□□ -0.41
EPHB4-207ENST00000489808 TMEM242Q9NWH2 141 aa12.51□□□□□ -0.41
EPHB4-207ENST00000489808 USP17L23D6RBM5 183 aa12.5□□□□□ -0.41
EPHB4-207ENST00000489808 MT-ND4LP03901 98 aa12.5□□□□□ -0.41
EPHB4-207ENST00000489808 FGF6P10767 208 aa12.5□□□□□ -0.41
EPHB4-207ENST00000489808 SUMO2P61956 95 aaKnown RBP12.5□□□□□ -0.41
EPHB4-207ENST00000489808 RNASEKQ6P5S7 137 aaKnown RBP12.5□□□□□ -0.41
EPHB4-207ENST00000489808 ANAPC16Q96DE5 110 aa12.5□□□□□ -0.41
EPHB4-207ENST00000489808 FAM30AQ9NZY2 134 aa12.5□□□□□ -0.41
EPHB4-207ENST00000489808 F8W036 122 aa12.49□□□□□ -0.41
EPHB4-207ENST00000489808 CKS2P33552 79 aa12.49□□□□□ -0.41
EPHB4-207ENST00000489808 UQCC3Q6UW78 93 aa12.48□□□□□ -0.41
EPHB4-207ENST00000489808 ATP5L2Q7Z4Y8 100 aa12.48□□□□□ -0.41
EPHB4-207ENST00000489808 TRBV24-1A0A075B6N3 115 aa12.47□□□□□ -0.41
EPHB4-207ENST00000489808 PRSS1P07477 247 aa12.47□□□□□ -0.41
EPHB4-207ENST00000489808 ZNF25P17030 456 aaPredicted RBP12.47□□□□□ -0.41
EPHB4-207ENST00000489808 LINC01620Q4KN68 170 aa12.47□□□□□ -0.41
EPHB4-207ENST00000489808 C20orf78Q9BR46 151 aa12.47□□□□□ -0.41
EPHB4-207ENST00000489808 TMEM101Q96IK0 257 aa12.46□□□□□ -0.41
EPHB4-207ENST00000489808 BTF3L4Q96K17 158 aa12.46□□□□□ -0.41
EPHB4-207ENST00000489808 IGKV3OR2-268A0A0C4DH90 116 aa12.45□□□□□ -0.42
EPHB4-207ENST00000489808 TMEM218A2RU14 115 aa12.45□□□□□ -0.42
EPHB4-207ENST00000489808 C7orf77A4D0Y5 90 aa12.45□□□□□ -0.42
EPHB4-207ENST00000489808 TNFRSF6BO95407 300 aa12.45□□□□□ -0.42
EPHB4-207ENST00000489808 FCER1GP30273 86 aa12.45□□□□□ -0.42
EPHB4-207ENST00000489808 HAMPP81172 84 aa12.45□□□□□ -0.42
EPHB4-207ENST00000489808 KIR2DL4Q99706 377 aa12.45□□□□□ -0.42
EPHB4-207ENST00000489808 D6R8Y8 96 aa12.44□□□□□ -0.42
EPHB4-207ENST00000489808 RPL32P62910 135 aaKnown RBP12.44□□□□□ -0.42
EPHB4-207ENST00000489808 DGAT2L7PQ6IED9 249 aa12.44□□□□□ -0.42
EPHB4-207ENST00000489808 Q6ZSA8 131 aa12.44□□□□□ -0.42
EPHB4-207ENST00000489808 MRPL52Q86TS9 123 aaKnown RBP12.44□□□□□ -0.42
EPHB4-207ENST00000489808 CLRN3Q8NCR9 226 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms