RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 RS1O15537 224 aa10.88□□□□□ -0.67
COL9A1-208ENST00000489611 TMEM170BQ5T4T1 132 aa10.88□□□□□ -0.67
COL9A1-208ENST00000489611 NDUFA7O95182 113 aa10.88□□□□□ -0.67
COL9A1-208ENST00000489611 CITED2Q99967 270 aaPredicted RBP10.88□□□□□ -0.67
COL9A1-208ENST00000489611 SPANXA1Q9NS26 97 aa10.88□□□□□ -0.67
COL9A1-208ENST00000489611 CBY1Q9Y3M2 126 aa10.88□□□□□ -0.67
COL9A1-208ENST00000489611 SPCS1Q9Y6A9 102 aa10.88□□□□□ -0.67
COL9A1-208ENST00000489611 C12orf74Q32Q52 190 aa10.87□□□□□ -0.67
COL9A1-208ENST00000489611 SPANXB1Q9NS25 103 aaPredicted RBP10.87□□□□□ -0.67
COL9A1-208ENST00000489611 IGLV4-3A0A075B6K6 122 aa10.86□□□□□ -0.67
COL9A1-208ENST00000489611 ZNRF2Q8NHG8 242 aa10.86□□□□□ -0.67
COL9A1-208ENST00000489611 A0A1W2PRX2 142 aa10.86□□□□□ -0.67
COL9A1-208ENST00000489611 C11orf44Q8N8P7 122 aa10.86□□□□□ -0.67
COL9A1-208ENST00000489611 LEPROTO15243 131 aa10.85□□□□□ -0.67
COL9A1-208ENST00000489611 CRLF1O75462 422 aa10.85□□□□□ -0.67
COL9A1-208ENST00000489611 SRSF9Q13242 221 aaKnown RBP eCLIP10.85□□□□□ -0.67
COL9A1-208ENST00000489611 IL17DQ8TAD2 202 aa10.85□□□□□ -0.67
COL9A1-208ENST00000489611 AMELXQ99217 191 aa10.85□□□□□ -0.67
COL9A1-208ENST00000489611 FN1P02751 2386 aaKnown RBP10.85□□□□□ -0.67
COL9A1-208ENST00000489611 TMEM223A0PJW6 202 aa10.84□□□□□ -0.67
COL9A1-208ENST00000489611 J3QQQ9 107 aa10.84□□□□□ -0.67
COL9A1-208ENST00000489611 CIDEAO60543 219 aa10.84□□□□□ -0.67
COL9A1-208ENST00000489611 LGALS3P17931 250 aaKnown RBP10.84□□□□□ -0.67
COL9A1-208ENST00000489611 TMEM263Q8WUH6 116 aaKnown RBP10.84□□□□□ -0.67
COL9A1-208ENST00000489611 PLEKHB2Q96CS7 222 aa10.84□□□□□ -0.67
COL9A1-208ENST00000489611 XCL2Q9UBD3 114 aa10.84□□□□□ -0.67
COL9A1-208ENST00000489611 IGHV3-73A0A0B4J1V6 119 aa10.84□□□□□ -0.67
COL9A1-208ENST00000489611 K7ERU9 68 aa10.84□□□□□ -0.67
COL9A1-208ENST00000489611 C1QTNF4Q9BXJ3 329 aa10.84□□□□□ -0.67
COL9A1-208ENST00000489611 NACAE9PAV3 2078 aa10.83□□□□□ -0.68
COL9A1-208ENST00000489611 A0A0J9YY99 117 aa10.83□□□□□ -0.68
COL9A1-208ENST00000489611 TRBV10-1A0A0K0K1A3 114 aa10.83□□□□□ -0.68
COL9A1-208ENST00000489611 IGLL5B9A064 214 aa10.83□□□□□ -0.68
COL9A1-208ENST00000489611 MRPS36P82909 103 aaKnown RBP10.83□□□□□ -0.68
COL9A1-208ENST00000489611 COTL1Q14019 142 aa10.83□□□□□ -0.68
COL9A1-208ENST00000489611 C1orf158Q8N1D5 194 aa10.83□□□□□ -0.68
COL9A1-208ENST00000489611 SLC25A29Q8N8R3 303 aa10.83□□□□□ -0.68
COL9A1-208ENST00000489611 IGLV1-51P01701 117 aa10.82□□□□□ -0.68
COL9A1-208ENST00000489611 EMP1P54849 157 aa10.82□□□□□ -0.68
COL9A1-208ENST00000489611 OCIAD2Q56VL3 154 aa10.82□□□□□ -0.68
COL9A1-208ENST00000489611 RNASE8Q8TDE3 154 aaKnown RBP10.82□□□□□ -0.68
COL9A1-208ENST00000489611 ZNF479Q96JC4 524 aa10.82□□□□□ -0.68
COL9A1-208ENST00000489611 TIMM21Q9BVV7 248 aa10.82□□□□□ -0.68
COL9A1-208ENST00000489611 MRPL16Q9NX20 251 aaKnown RBP10.82□□□□□ -0.68
COL9A1-208ENST00000489611 SAP30O75446 220 aa10.82□□□□□ -0.68
COL9A1-208ENST00000489611 ZNF22P17026 224 aaPredicted RBP10.82□□□□□ -0.68
COL9A1-208ENST00000489611 AZU1P20160 251 aa10.82□□□□□ -0.68
COL9A1-208ENST00000489611 PROK1P58294 105 aa10.82□□□□□ -0.68
COL9A1-208ENST00000489611 SMAGPQ0VAQ4 97 aa10.82□□□□□ -0.68
COL9A1-208ENST00000489611 NF1P21359 2839 aa10.81□□□□□ -0.68
COL9A1-208ENST00000489611 K7ERJ3 54 aa10.81□□□□□ -0.68
COL9A1-208ENST00000489611 DEFB104AQ8WTQ1 72 aa10.81□□□□□ -0.68
COL9A1-208ENST00000489611 UBE2D1P51668 147 aa10.8□□□□□ -0.68
COL9A1-208ENST00000489611 DAZ2Q13117 558 aaKnown RBP10.8□□□□□ -0.68
COL9A1-208ENST00000489611 RRN3P1Q2M238 152 aa10.8□□□□□ -0.68
COL9A1-208ENST00000489611 CHCHD7Q9BUK0 85 aa10.8□□□□□ -0.68
COL9A1-208ENST00000489611 UBE2D4Q9Y2X8 147 aa10.8□□□□□ -0.68
COL9A1-208ENST00000489611 TINCRA0A1B0GVN0 87 aa10.8□□□□□ -0.68
COL9A1-208ENST00000489611 Q6ZSN1 163 aa10.8□□□□□ -0.68
COL9A1-208ENST00000489611 OPRPNQ99935 248 aaPredicted RBP10.8□□□□□ -0.68
COL9A1-208ENST00000489611 NAA38Q9BRA0 125 aaKnown RBP10.8□□□□□ -0.68
COL9A1-208ENST00000489611 F8P00451 2351 aa10.8□□□□□ -0.68
COL9A1-208ENST00000489611 TRAV4A0A0B4J268 109 aa10.79□□□□□ -0.68
COL9A1-208ENST00000489611 LYRM7Q5U5X0 104 aa10.79□□□□□ -0.68
COL9A1-208ENST00000489611 C16orf74Q96GX8 76 aa10.79□□□□□ -0.68
COL9A1-208ENST00000489611 NSD1Q96L73 2696 aaPredicted RBP10.79□□□□□ -0.68
COL9A1-208ENST00000489611 A0A0J9YXV3 536 aa10.78□□□□□ -0.68
COL9A1-208ENST00000489611 PRM2P04554 102 aa10.78□□□□□ -0.68
COL9A1-208ENST00000489611 RPL36AP83881 106 aaKnown RBP10.78□□□□□ -0.68
COL9A1-208ENST00000489611 RPL36ALQ969Q0 106 aaKnown RBP10.78□□□□□ -0.68
COL9A1-208ENST00000489611 TRGV1A0A0A0MS02 117 aa10.78□□□□□ -0.68
COL9A1-208ENST00000489611 F8W1H4 67 aa10.78□□□□□ -0.68
COL9A1-208ENST00000489611 RBX1P62877 108 aa10.78□□□□□ -0.68
COL9A1-208ENST00000489611 DAZ4Q86SG3 579 aaKnown RBP10.78□□□□□ -0.68
COL9A1-208ENST00000489611 NDUFA11Q86Y39 141 aa10.78□□□□□ -0.68
COL9A1-208ENST00000489611 DAZ3Q9NR90 486 aaKnown RBP10.78□□□□□ -0.68
COL9A1-208ENST00000489611 TMEM238C9JI98 176 aa10.77□□□□□ -0.69
COL9A1-208ENST00000489611 TSPEAR-AS2P59090 65 aa10.77□□□□□ -0.69
COL9A1-208ENST00000489611 IGHV3OR16-12A0A075B7B8 117 aa10.76□□□□□ -0.69
COL9A1-208ENST00000489611 IGHV3-30P01768 117 aa10.76□□□□□ -0.69
COL9A1-208ENST00000489611 IGHV3-30-5P0DP03 117 aa10.76□□□□□ -0.69
COL9A1-208ENST00000489611 SVIPQ8NHG7 77 aa10.76□□□□□ -0.69
COL9A1-208ENST00000489611 CSDC2Q9Y534 153 aaKnown RBP10.76□□□□□ -0.69
COL9A1-208ENST00000489611 K7EQD1 137 aa10.76□□□□□ -0.69
COL9A1-208ENST00000489611 FAM104AQ969W3 186 aa10.76□□□□□ -0.69
COL9A1-208ENST00000489611 ADARB2-AS1A8MUL3 147 aa10.75□□□□□ -0.69
COL9A1-208ENST00000489611 IGHV1-58A0A0C4DH39 117 aa10.74□□□□□ -0.69
COL9A1-208ENST00000489611 TIRAPP58753 221 aa10.74□□□□□ -0.69
COL9A1-208ENST00000489611 KRTAP10-3P60369 221 aa10.74□□□□□ -0.69
COL9A1-208ENST00000489611 RPL24P83731 157 aaKnown RBP10.74□□□□□ -0.69
COL9A1-208ENST00000489611 DGAT2L7PQ6IED9 249 aa10.74□□□□□ -0.69
COL9A1-208ENST00000489611 C19orf73Q9NVV2 129 aa10.74□□□□□ -0.69
COL9A1-208ENST00000489611 IGHV3-30-3P0DP02 117 aa10.74□□□□□ -0.69
COL9A1-208ENST00000489611 OVOL2Q9BRP0 275 aa10.74□□□□□ -0.69
COL9A1-208ENST00000489611 PGPEP1Q9NXJ5 209 aa10.74□□□□□ -0.69
COL9A1-208ENST00000489611 GEMIN7Q9H840 131 aaKnown RBP10.73□□□□□ -0.69
COL9A1-208ENST00000489611 FAM19A3Q7Z5A8 133 aa10.72□□□□□ -0.69
COL9A1-208ENST00000489611 GTSF1LQ9H1H1 148 aa10.72□□□□□ -0.69
COL9A1-208ENST00000489611 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.72□□□□□ -0.69
COL9A1-208ENST00000489611 IGLV5-45A0A087WSX0 123 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms