RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 RBMY1DP0C7P1 496 aaKnown RBP4.62□□□□□ -1.67
SF3A3-208ENST00000489537 COX8AP10176 69 aa4.62□□□□□ -1.67
SF3A3-208ENST00000489537 GATA1P15976 413 aaPredicted RBP4.62□□□□□ -1.67
SF3A3-208ENST00000489537 AZU1P20160 251 aa4.62□□□□□ -1.67
SF3A3-208ENST00000489537 FXYD7P58549 80 aa4.62□□□□□ -1.67
SF3A3-208ENST00000489537 SEC11AP67812 179 aa4.62□□□□□ -1.67
SF3A3-208ENST00000489537 PMVKQ15126 192 aa4.62□□□□□ -1.67
SF3A3-208ENST00000489537 COL5A1-AS1Q5SY13 56 aa4.62□□□□□ -1.67
SF3A3-208ENST00000489537 CFAP126Q5VTH2 177 aa4.62□□□□□ -1.67
SF3A3-208ENST00000489537 Q6ZQT7 251 aa4.62□□□□□ -1.67
SF3A3-208ENST00000489537 DAZ4Q86SG3 579 aaKnown RBP4.62□□□□□ -1.67
SF3A3-208ENST00000489537 RNASE8Q8TDE3 154 aaKnown RBP4.62□□□□□ -1.67
SF3A3-208ENST00000489537 C14orf144Q96I85 54 aa4.62□□□□□ -1.67
SF3A3-208ENST00000489537 C18orf15Q96N68 181 aa4.62□□□□□ -1.67
SF3A3-208ENST00000489537 OVOL2Q9BRP0 275 aa4.62□□□□□ -1.67
SF3A3-208ENST00000489537 DAZ3Q9NR90 486 aaKnown RBP4.62□□□□□ -1.67
SF3A3-208ENST00000489537 SPANXA1Q9NS26 97 aa4.62□□□□□ -1.67
SF3A3-208ENST00000489537 DNAH3Q8TD57 4116 aa4.61□□□□□ -1.67
SF3A3-208ENST00000489537 TRGV1A0A0A0MS02 117 aa4.61□□□□□ -1.67
SF3A3-208ENST00000489537 TRBV6-4A0A1B0GX49 114 aa4.61□□□□□ -1.67
SF3A3-208ENST00000489537 H7C423 109 aa4.61□□□□□ -1.67
SF3A3-208ENST00000489537 IGLL1P15814 213 aa4.61□□□□□ -1.67
SF3A3-208ENST00000489537 KRTAP10-3P60369 221 aa4.61□□□□□ -1.67
SF3A3-208ENST00000489537 COTL1Q14019 142 aa4.61□□□□□ -1.67
SF3A3-208ENST00000489537 ODF1Q14990 250 aa4.61□□□□□ -1.67
SF3A3-208ENST00000489537 HIST2H2BDQ6DRA6 164 aa4.61□□□□□ -1.67
SF3A3-208ENST00000489537 UFSP1Q6NVU6 142 aa4.61□□□□□ -1.67
SF3A3-208ENST00000489537 C1orf158Q8N1D5 194 aa4.61□□□□□ -1.67
SF3A3-208ENST00000489537 C20orf203Q8NBC4 194 aa4.61□□□□□ -1.67
SF3A3-208ENST00000489537 NEXN-AS1Q8NBZ9 246 aa4.61□□□□□ -1.67
SF3A3-208ENST00000489537 IL17DQ8TAD2 202 aa4.61□□□□□ -1.67
SF3A3-208ENST00000489537 RPL39LQ96EH5 51 aaKnown RBP4.61□□□□□ -1.67
SF3A3-208ENST00000489537 PRADC1Q9BSG0 188 aa4.61□□□□□ -1.67
SF3A3-208ENST00000489537 TIMM21Q9BVV7 248 aa4.61□□□□□ -1.67
SF3A3-208ENST00000489537 CHTOPQ9Y3Y2 248 aaKnown RBP4.61□□□□□ -1.67
SF3A3-208ENST00000489537 SELENOKQ9Y6D0 94 aa4.61□□□□□ -1.67
SF3A3-208ENST00000489537 TGP01266 2768 aa4.6□□□□□ -1.67
SF3A3-208ENST00000489537 TRBV7-3A0A075B6L6 115 aa4.6□□□□□ -1.67
SF3A3-208ENST00000489537 TRGV2A0A075B6R0 118 aa4.6□□□□□ -1.67
SF3A3-208ENST00000489537 LYRM9A8MSI8 78 aa4.6□□□□□ -1.67
SF3A3-208ENST00000489537 RBMY1A1P0DJD3 496 aaKnown RBP4.6□□□□□ -1.67
SF3A3-208ENST00000489537 RBMY1CP0DJD4 496 aa4.6□□□□□ -1.67
SF3A3-208ENST00000489537 GCSHP23434 173 aa4.6□□□□□ -1.67
SF3A3-208ENST00000489537 KRTAP10-2P60368 255 aa4.6□□□□□ -1.67
SF3A3-208ENST00000489537 CTAG1AP78358 180 aa4.6□□□□□ -1.67
SF3A3-208ENST00000489537 RBMY1FQ15415 496 aaKnown RBP4.6□□□□□ -1.67
SF3A3-208ENST00000489537 SH2D6Q7Z4S9 175 aa4.6□□□□□ -1.67
SF3A3-208ENST00000489537 GTSF1LQ9H1H1 148 aa4.6□□□□□ -1.67
SF3A3-208ENST00000489537 HIGD1BQ9P298 99 aa4.6□□□□□ -1.67
SF3A3-208ENST00000489537 TP53TG1Q9Y2A0 90 aa4.6□□□□□ -1.67
SF3A3-208ENST00000489537 IGHV3OR16-12A0A075B7B8 117 aa4.59□□□□□ -1.67
SF3A3-208ENST00000489537 A6NDN8 102 aa4.59□□□□□ -1.67
SF3A3-208ENST00000489537 IGIPA6NJ69 53 aa4.59□□□□□ -1.67
SF3A3-208ENST00000489537 K7EQD1 137 aa4.59□□□□□ -1.67
SF3A3-208ENST00000489537 MIFP14174 115 aa4.59□□□□□ -1.67
SF3A3-208ENST00000489537 NOTCH1P46531 2555 aa4.59□□□□□ -1.67
SF3A3-208ENST00000489537 TAL2Q16559 108 aa4.59□□□□□ -1.67
SF3A3-208ENST00000489537 PRR31Q5SQ13 230 aa4.59□□□□□ -1.67
SF3A3-208ENST00000489537 DGAT2L7PQ6IED9 249 aa4.59□□□□□ -1.67
SF3A3-208ENST00000489537 LINC00173Q6ZV60 143 aa4.59□□□□□ -1.67
SF3A3-208ENST00000489537 ATOH7Q8N100 152 aa4.59□□□□□ -1.67
SF3A3-208ENST00000489537 C3orf56Q8N813 242 aa4.59□□□□□ -1.67
SF3A3-208ENST00000489537 CSNK1G2-AS1Q8NCQ2 148 aa4.59□□□□□ -1.67
SF3A3-208ENST00000489537 OR11H2Q8NH07 326 aa4.59□□□□□ -1.67
SF3A3-208ENST00000489537 VCX2Q9H322 139 aa4.59□□□□□ -1.67
SF3A3-208ENST00000489537 JPT2Q9H910 190 aa4.59□□□□□ -1.67
SF3A3-208ENST00000489537 CSDC2Q9Y534 153 aaKnown RBP4.59□□□□□ -1.67
SF3A3-208ENST00000489537 TRGV4A0A0C4DH28 118 aa4.58□□□□□ -1.68
SF3A3-208ENST00000489537 hDV102S1A0JD36 115 aa4.58□□□□□ -1.68
SF3A3-208ENST00000489537 C11orf86A6NJI1 115 aa4.58□□□□□ -1.68
SF3A3-208ENST00000489537 A8MZ25 164 aa4.58□□□□□ -1.68
SF3A3-208ENST00000489537 SPRY2O43597 315 aa4.58□□□□□ -1.68
SF3A3-208ENST00000489537 GAS8-AS1O95177 125 aa4.58□□□□□ -1.68
SF3A3-208ENST00000489537 ZNF25P17030 456 aaPredicted RBP4.58□□□□□ -1.68
SF3A3-208ENST00000489537 RPL35AP18077 110 aaKnown RBP4.58□□□□□ -1.68
SF3A3-208ENST00000489537 MRPS36P82909 103 aaKnown RBP4.58□□□□□ -1.68
SF3A3-208ENST00000489537 HSD52Q0P140 79 aa4.58□□□□□ -1.68
SF3A3-208ENST00000489537 ZC2HC1BQ5TFG8 222 aa4.58□□□□□ -1.68
SF3A3-208ENST00000489537 BAALCQ8WXS3 180 aa4.58□□□□□ -1.68
SF3A3-208ENST00000489537 CST9LQ9H4G1 147 aa4.58□□□□□ -1.68
SF3A3-208ENST00000489537 MRPL16Q9NX20 251 aaKnown RBP4.58□□□□□ -1.68
SF3A3-208ENST00000489537 MRPL35Q9NZE8 188 aaKnown RBP4.58□□□□□ -1.68
SF3A3-208ENST00000489537 DNAH9Q9NYC9 4486 aa4.57□□□□□ -1.68
SF3A3-208ENST00000489537 PRSS29PA6NIE9 313 aa4.57□□□□□ -1.68
SF3A3-208ENST00000489537 E9PLD3 99 aa4.57□□□□□ -1.68
SF3A3-208ENST00000489537 H3BRM9 83 aa4.57□□□□□ -1.68
SF3A3-208ENST00000489537 TSHBP01222 138 aa4.57□□□□□ -1.68
SF3A3-208ENST00000489537 NMUP48645 174 aa4.57□□□□□ -1.68
SF3A3-208ENST00000489537 NFE4Q86UQ8 179 aa4.57□□□□□ -1.68
SF3A3-208ENST00000489537 PLEKHB2Q96CS7 222 aa4.57□□□□□ -1.68
SF3A3-208ENST00000489537 TMEM101Q96IK0 257 aa4.57□□□□□ -1.68
SF3A3-208ENST00000489537 NOP10Q9NPE3 64 aaKnown RBP4.57□□□□□ -1.68
SF3A3-208ENST00000489537 HHLA3Q9XRX5 114 aa4.57□□□□□ -1.68
SF3A3-208ENST00000489537 UBE2L6O14933 153 aa4.56□□□□□ -1.68
SF3A3-208ENST00000489537 CCL25O15444 150 aa4.56□□□□□ -1.68
SF3A3-208ENST00000489537 GIG44P09565 113 aaPredicted RBP4.56□□□□□ -1.68
SF3A3-208ENST00000489537 LINC00612Q8N6U2 182 aa4.56□□□□□ -1.68
SF3A3-208ENST00000489537 ZNRF2Q8NHG8 242 aa4.56□□□□□ -1.68
SF3A3-208ENST00000489537 COPS9Q8WXC6 57 aa4.56□□□□□ -1.68
SF3A3-208ENST00000489537 SNHG12Q9BXW3 62 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms