RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 ST20Q9HBF5 79 aa10.46□□□□□ -0.73
LMX1A-204ENST00000489443 A0A1B0GW15 77 aa10.45□□□□□ -0.74
LMX1A-204ENST00000489443 SMKR1H3BMG3 65 aa10.45□□□□□ -0.74
LMX1A-204ENST00000489443 PPP1R2P9O14990 202 aa10.45□□□□□ -0.74
LMX1A-204ENST00000489443 NCR2O95944 276 aa10.45□□□□□ -0.74
LMX1A-204ENST00000489443 PMCHP20382 165 aa10.45□□□□□ -0.74
LMX1A-204ENST00000489443 PNRC1Q12796 327 aaPredicted RBP10.45□□□□□ -0.74
LMX1A-204ENST00000489443 CDPF1Q6NVV7 123 aa10.45□□□□□ -0.74
LMX1A-204ENST00000489443 CLPSL2Q6UWE3 100 aa10.45□□□□□ -0.74
LMX1A-204ENST00000489443 LINC00269Q8N2A0 174 aa10.45□□□□□ -0.74
LMX1A-204ENST00000489443 MAPKAPK5-AS1Q8N8E1 139 aa10.45□□□□□ -0.74
LMX1A-204ENST00000489443 BAALCQ8WXS3 180 aa10.45□□□□□ -0.74
LMX1A-204ENST00000489443 LRP1BQ9NZR2 4599 aa10.45□□□□□ -0.74
LMX1A-204ENST00000489443 DNAH5Q8TE73 4624 aa10.44□□□□□ -0.74
LMX1A-204ENST00000489443 HERC2O95714 4834 aa10.44□□□□□ -0.74
LMX1A-204ENST00000489443 TRBV6-5A0A0K0K1A5 114 aa10.44□□□□□ -0.74
LMX1A-204ENST00000489443 I3L3M4 83 aa10.44□□□□□ -0.74
LMX1A-204ENST00000489443 MT-ND4LP03901 98 aa10.44□□□□□ -0.74
LMX1A-204ENST00000489443 RPS10P46783 165 aaKnown RBP10.44□□□□□ -0.74
LMX1A-204ENST00000489443 WFDC2Q14508 124 aa10.44□□□□□ -0.74
LMX1A-204ENST00000489443 FAM104BQ5XKR9 115 aa10.44□□□□□ -0.74
LMX1A-204ENST00000489443 C1orf43Q9BWL3 253 aa10.44□□□□□ -0.74
LMX1A-204ENST00000489443 APCSP02743 223 aa10.43□□□□□ -0.74
LMX1A-204ENST00000489443 MRPL51Q4U2R6 128 aaKnown RBP10.43□□□□□ -0.74
LMX1A-204ENST00000489443 UQCC3Q6UW78 93 aa10.43□□□□□ -0.74
LMX1A-204ENST00000489443 Q8N814 137 aa10.43□□□□□ -0.74
LMX1A-204ENST00000489443 TMEM70Q9BUB7 260 aa10.43□□□□□ -0.74
LMX1A-204ENST00000489443 IGLV4-60A0A075B6I1 120 aa10.42□□□□□ -0.74
LMX1A-204ENST00000489443 A0A1B0GUV1 79 aa10.42□□□□□ -0.74
LMX1A-204ENST00000489443 S100A8P05109 93 aa10.42□□□□□ -0.74
LMX1A-204ENST00000489443 HBBP68871 147 aa10.42□□□□□ -0.74
LMX1A-204ENST00000489443 MIAQ16674 131 aa10.42□□□□□ -0.74
LMX1A-204ENST00000489443 C20orf203Q8NBC4 194 aa10.42□□□□□ -0.74
LMX1A-204ENST00000489443 IGLV5-52A0A0A0MRZ9 124 aa10.41□□□□□ -0.74
LMX1A-204ENST00000489443 TMEM218A2RU14 115 aa10.41□□□□□ -0.74
LMX1A-204ENST00000489443 F8W036 122 aa10.41□□□□□ -0.74
LMX1A-204ENST00000489443 POLR2KP53803 58 aaKnown RBP10.41□□□□□ -0.74
LMX1A-204ENST00000489443 ANAPC16Q96DE5 110 aa10.41□□□□□ -0.74
LMX1A-204ENST00000489443 PRR34Q9NV39 138 aa10.41□□□□□ -0.74
LMX1A-204ENST00000489443 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.4□□□□□ -0.74
LMX1A-204ENST00000489443 A0A1B0GXF2 115 aa10.4□□□□□ -0.74
LMX1A-204ENST00000489443 IGKV2-29A2NJV5 120 aaPredicted RBP10.4□□□□□ -0.74
LMX1A-204ENST00000489443 CDK2AP2O75956 126 aa10.4□□□□□ -0.74
LMX1A-204ENST00000489443 PPP1R17O96001 155 aa10.4□□□□□ -0.74
LMX1A-204ENST00000489443 REG3AQ06141 175 aa10.4□□□□□ -0.74
LMX1A-204ENST00000489443 AMMECR1LQ6DCA0 310 aa10.4□□□□□ -0.74
LMX1A-204ENST00000489443 COMMD7Q86VX2 200 aa10.4□□□□□ -0.74
LMX1A-204ENST00000489443 NRACQ8N912 160 aa10.4□□□□□ -0.74
LMX1A-204ENST00000489443 NTN5Q8WTR8 489 aaPredicted RBP10.4□□□□□ -0.74
LMX1A-204ENST00000489443 TMEM242Q9NWH2 141 aa10.4□□□□□ -0.74
LMX1A-204ENST00000489443 TSHBP01222 138 aa10.39□□□□□ -0.75
LMX1A-204ENST00000489443 ADCYAP1P18509 176 aa10.39□□□□□ -0.75
LMX1A-204ENST00000489443 GCSHP23434 173 aa10.39□□□□□ -0.75
LMX1A-204ENST00000489443 CKS2P33552 79 aa10.39□□□□□ -0.75
LMX1A-204ENST00000489443 KRTAP10-1P60331 282 aa10.39□□□□□ -0.75
LMX1A-204ENST00000489443 RNASEKQ6P5S7 137 aaKnown RBP10.39□□□□□ -0.75
LMX1A-204ENST00000489443 RYR1P21817 5038 aa10.39□□□□□ -0.75
LMX1A-204ENST00000489443 IGLV10-54A0A075B6I4 117 aa10.38□□□□□ -0.75
LMX1A-204ENST00000489443 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.38□□□□□ -0.75
LMX1A-204ENST00000489443 TRBV27A0A0K0K1C4 114 aa10.38□□□□□ -0.75
LMX1A-204ENST00000489443 LINC00862A6NCI5 91 aa10.38□□□□□ -0.75
LMX1A-204ENST00000489443 VCYO14598 125 aa10.38□□□□□ -0.75
LMX1A-204ENST00000489443 HLA-DQA1P01909 254 aa10.38□□□□□ -0.75
LMX1A-204ENST00000489443 SUMO2P61956 95 aaKnown RBP10.38□□□□□ -0.75
LMX1A-204ENST00000489443 ATP5L2Q7Z4Y8 100 aa10.38□□□□□ -0.75
LMX1A-204ENST00000489443 H7C423 109 aa10.37□□□□□ -0.75
LMX1A-204ENST00000489443 FGF6P10767 208 aa10.37□□□□□ -0.75
LMX1A-204ENST00000489443 IGKV3OR2-268A0A0C4DH90 116 aa10.36□□□□□ -0.75
LMX1A-204ENST00000489443 D6R8Y8 96 aa10.36□□□□□ -0.75
LMX1A-204ENST00000489443 ESDP10768 282 aa10.36□□□□□ -0.75
LMX1A-204ENST00000489443 FCER1GP30273 86 aa10.36□□□□□ -0.75
LMX1A-204ENST00000489443 TRAV8-4A0A0B4J246 113 aa10.35□□□□□ -0.75
LMX1A-204ENST00000489443 TNFRSF6BO95407 300 aa10.35□□□□□ -0.75
LMX1A-204ENST00000489443 KIR2DL4Q99706 377 aa10.35□□□□□ -0.75
LMX1A-204ENST00000489443 C20orf78Q9BR46 151 aa10.35□□□□□ -0.75
LMX1A-204ENST00000489443 SEC11CQ9BY50 192 aa10.35□□□□□ -0.75
LMX1A-204ENST00000489443 HSPG2P98160 4391 aa10.35□□□□□ -0.75
LMX1A-204ENST00000489443 APOBP04114 4563 aaKnown RBP10.34□□□□□ -0.75
LMX1A-204ENST00000489443 TRBV24-1A0A075B6N3 115 aa10.34□□□□□ -0.75
LMX1A-204ENST00000489443 USP17L23D6RBM5 183 aa10.34□□□□□ -0.75
LMX1A-204ENST00000489443 KRTAP26-1Q6PEX3 210 aa10.34□□□□□ -0.75
LMX1A-204ENST00000489443 TMEM101Q96IK0 257 aa10.34□□□□□ -0.75
LMX1A-204ENST00000489443 BTF3L4Q96K17 158 aa10.34□□□□□ -0.75
LMX1A-204ENST00000489443 C7orf77A4D0Y5 90 aa10.33□□□□□ -0.76
LMX1A-204ENST00000489443 PPBPP02775 128 aa10.33□□□□□ -0.76
LMX1A-204ENST00000489443 ZNF25P17030 456 aaPredicted RBP10.33□□□□□ -0.76
LMX1A-204ENST00000489443 C14orf177Q52M58 125 aa10.33□□□□□ -0.76
LMX1A-204ENST00000489443 CTDSP1Q9GZU7 261 aa10.33□□□□□ -0.76
LMX1A-204ENST00000489443 NPYP01303 97 aa10.32□□□□□ -0.76
LMX1A-204ENST00000489443 TMEM136Q6ZRR5 245 aa10.32□□□□□ -0.76
LMX1A-204ENST00000489443 ORMDL3Q8N138 153 aa10.32□□□□□ -0.76
LMX1A-204ENST00000489443 OR5A1Q8NGJ0 315 aa10.32□□□□□ -0.76
LMX1A-204ENST00000489443 PRELID3AQ96N28 172 aa10.32□□□□□ -0.76
LMX1A-204ENST00000489443 RPL32P62910 135 aaKnown RBP10.31□□□□□ -0.76
LMX1A-204ENST00000489443 IMMP2LQ96T52 175 aa10.31□□□□□ -0.76
LMX1A-204ENST00000489443 SMIM2Q9BVW6 85 aa10.31□□□□□ -0.76
LMX1A-204ENST00000489443 PHOX2AO14813 284 aa10.3□□□□□ -0.76
LMX1A-204ENST00000489443 LINC01620Q4KN68 170 aa10.3□□□□□ -0.76
LMX1A-204ENST00000489443 DGAT2L7PQ6IED9 249 aa10.3□□□□□ -0.76
LMX1A-204ENST00000489443 MRPL52Q86TS9 123 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms