RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 OR5A1Q8NGJ0 315 aa8.61□□□□□ -1.03
UFD1-209ENST00000489406 DEDD2Q8WXF8 326 aa8.61□□□□□ -1.03
UFD1-209ENST00000489406 OPRPNQ99935 248 aaPredicted RBP8.61□□□□□ -1.03
UFD1-209ENST00000489406 CCL25O15444 150 aa8.6□□□□□ -1.03
UFD1-209ENST00000489406 LINC00304Q8N9R0 145 aa8.6□□□□□ -1.03
UFD1-209ENST00000489406 CAMK2N2Q96S95 79 aa8.6□□□□□ -1.03
UFD1-209ENST00000489406 A6NHS1 94 aa8.59□□□□□ -1.03
UFD1-209ENST00000489406 M0QY20 66 aa8.59□□□□□ -1.03
UFD1-209ENST00000489406 ARL14EPLP0DKL9 152 aa8.59□□□□□ -1.03
UFD1-209ENST00000489406 SMIM17P0DL12 118 aa8.58□□□□□ -1.04
UFD1-209ENST00000489406 AMMECR1LQ6DCA0 310 aa8.58□□□□□ -1.04
UFD1-209ENST00000489406 RNASEKQ6P5S7 137 aaKnown RBP8.58□□□□□ -1.04
UFD1-209ENST00000489406 PGLYRP4Q96LB8 373 aa8.58□□□□□ -1.04
UFD1-209ENST00000489406 SYNE2Q8WXH0 6885 aaKnown RBP8.57□□□□□ -1.04
UFD1-209ENST00000489406 IL15RAQ13261 267 aa8.57□□□□□ -1.04
UFD1-209ENST00000489406 Q86TA4 180 aa8.57□□□□□ -1.04
UFD1-209ENST00000489406 MED28Q9H204 178 aa8.57□□□□□ -1.04
UFD1-209ENST00000489406 ANAPC11Q9NYG5 84 aa8.57□□□□□ -1.04
UFD1-209ENST00000489406 COTL1Q14019 142 aa8.56□□□□□ -1.04
UFD1-209ENST00000489406 KRTAP13-3Q3SY46 172 aa8.56□□□□□ -1.04
UFD1-209ENST00000489406 KRTAP13-2Q52LG2 175 aa8.56□□□□□ -1.04
UFD1-209ENST00000489406 SPANXN1Q5VSR9 72 aa8.56□□□□□ -1.04
UFD1-209ENST00000489406 LINC00959A0A1B0GUT2 108 aa8.55□□□□□ -1.04
UFD1-209ENST00000489406 M0R2T5 61 aa8.55□□□□□ -1.04
UFD1-209ENST00000489406 MGPP08493 103 aa8.55□□□□□ -1.04
UFD1-209ENST00000489406 RNF151Q2KHN1 245 aa8.55□□□□□ -1.04
UFD1-209ENST00000489406 SUMO4Q6EEV6 95 aa8.55□□□□□ -1.04
UFD1-209ENST00000489406 RBM38Q9H0Z9 239 aaKnown RBP8.55□□□□□ -1.04
UFD1-209ENST00000489406 M0QXV9 152 aa8.54□□□□□ -1.04
UFD1-209ENST00000489406 KRTAP7-1Q8IUC3 87 aa8.54□□□□□ -1.04
UFD1-209ENST00000489406 BCL2L11O43521 198 aa8.53□□□□□ -1.04
UFD1-209ENST00000489406 GCHFRP30047 84 aa8.53□□□□□ -1.04
UFD1-209ENST00000489406 SCGB1C1Q8TD33 95 aa8.53□□□□□ -1.04
UFD1-209ENST00000489406 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.52□□□□□ -1.05
UFD1-209ENST00000489406 IGKV2-29A2NJV5 120 aaPredicted RBP8.52□□□□□ -1.05
UFD1-209ENST00000489406 C19orf71A6NCJ1 209 aa8.52□□□□□ -1.05
UFD1-209ENST00000489406 MALP21145 153 aa8.52□□□□□ -1.05
UFD1-209ENST00000489406 LRRC37A5PQ49AS3 106 aa8.52□□□□□ -1.05
UFD1-209ENST00000489406 COX8CQ7Z4L0 72 aa8.52□□□□□ -1.05
UFD1-209ENST00000489406 AP1S3Q96PC3 154 aa8.52□□□□□ -1.05
UFD1-209ENST00000489406 V9GYH0 126 aa8.52□□□□□ -1.05
UFD1-209ENST00000489406 NAP1L6A6NFF2 107 aa8.51□□□□□ -1.05
UFD1-209ENST00000489406 STAG3L2P0CL84 134 aa8.51□□□□□ -1.05
UFD1-209ENST00000489406 STAG3L3P0CL85 134 aa8.51□□□□□ -1.05
UFD1-209ENST00000489406 RASL11AQ6T310 242 aa8.51□□□□□ -1.05
UFD1-209ENST00000489406 CD164L2Q6UWJ8 174 aa8.51□□□□□ -1.05
UFD1-209ENST00000489406 C2orf48Q96LS8 159 aa8.51□□□□□ -1.05
UFD1-209ENST00000489406 hCG_2014768A0A024R1R8 64 aa8.5□□□□□ -1.05
UFD1-209ENST00000489406 SNAI2O43623 268 aa8.5□□□□□ -1.05
UFD1-209ENST00000489406 ZFP30Q9Y2G7 519 aa8.5□□□□□ -1.05
UFD1-209ENST00000489406 PEX7O00628 323 aa8.49□□□□□ -1.05
UFD1-209ENST00000489406 ESDP10768 282 aa8.49□□□□□ -1.05
UFD1-209ENST00000489406 CDC34P49427 236 aaPredicted RBP8.49□□□□□ -1.05
UFD1-209ENST00000489406 SS18Q15532 418 aa8.49□□□□□ -1.05
UFD1-209ENST00000489406 NIT2Q9NQR4 276 aa8.49□□□□□ -1.05
UFD1-209ENST00000489406 GAGE2EQ4V326 116 aa8.48□□□□□ -1.05
UFD1-209ENST00000489406 SEC22CQ9BRL7 303 aa8.48□□□□□ -1.05
UFD1-209ENST00000489406 SMIM3Q9BZL3 60 aa8.48□□□□□ -1.05
UFD1-209ENST00000489406 GAGE2DQ9UEU5 116 aa8.48□□□□□ -1.05
UFD1-209ENST00000489406 ATP6V1G2O95670 118 aa8.47□□□□□ -1.05
UFD1-209ENST00000489406 OR5AL1P0C617 328 aa8.47□□□□□ -1.05
UFD1-209ENST00000489406 BTCP35070 178 aa8.47□□□□□ -1.05
UFD1-209ENST00000489406 FP248Q71RG6 208 aaPredicted RBP8.47□□□□□ -1.05
UFD1-209ENST00000489406 CTDSP1Q9GZU7 261 aa8.47□□□□□ -1.05
UFD1-209ENST00000489406 TMEM167BQ9NRX6 74 aa8.47□□□□□ -1.05
UFD1-209ENST00000489406 MACF1Q9UPN3 7388 aaKnown RBP8.46□□□□□ -1.05
UFD1-209ENST00000489406 RAB24Q969Q5 203 aa8.46□□□□□ -1.06
UFD1-209ENST00000489406 IMMP2LQ96T52 175 aa8.46□□□□□ -1.06
UFD1-209ENST00000489406 WFDC1Q9HC57 220 aa8.46□□□□□ -1.06
UFD1-209ENST00000489406 A0A1W2PRE2 83 aa8.45□□□□□ -1.06
UFD1-209ENST00000489406 COX7A2LO14548 114 aa8.45□□□□□ -1.06
UFD1-209ENST00000489406 NTF3P20783 257 aa8.45□□□□□ -1.06
UFD1-209ENST00000489406 CTAG1AP78358 180 aa8.45□□□□□ -1.06
UFD1-209ENST00000489406 Q6ZNX1 250 aa8.45□□□□□ -1.06
UFD1-209ENST00000489406 BTF3L4Q96K17 158 aa8.45□□□□□ -1.06
UFD1-209ENST00000489406 H0YIZ8 118 aa8.44□□□□□ -1.06
UFD1-209ENST00000489406 H7C423 109 aa8.44□□□□□ -1.06
UFD1-209ENST00000489406 CXCL1P09341 107 aa8.44□□□□□ -1.06
UFD1-209ENST00000489406 UBE2G1P62253 170 aa8.44□□□□□ -1.06
UFD1-209ENST00000489406 OR2D3Q8NGH3 330 aa8.44□□□□□ -1.06
UFD1-209ENST00000489406 TMEM101Q96IK0 257 aa8.44□□□□□ -1.06
UFD1-209ENST00000489406 NUPR1O60356 82 aa8.43□□□□□ -1.06
UFD1-209ENST00000489406 ZNF25P17030 456 aaPredicted RBP8.43□□□□□ -1.06
UFD1-209ENST00000489406 RPL28P46779 137 aaKnown RBP8.43□□□□□ -1.06
UFD1-209ENST00000489406 UBE2G2P60604 165 aa8.43□□□□□ -1.06
UFD1-209ENST00000489406 SPAG11BQ08648 103 aa8.43□□□□□ -1.06
UFD1-209ENST00000489406 LINC00242Q5T6M2 205 aa8.43□□□□□ -1.06
UFD1-209ENST00000489406 MRPL35Q9NZE8 188 aaKnown RBP8.43□□□□□ -1.06
UFD1-209ENST00000489406 CXorf1O96002 111 aa8.42□□□□□ -1.06
UFD1-209ENST00000489406 HIST1H2BAQ96A08 127 aa8.42□□□□□ -1.06
UFD1-209ENST00000489406 FMC1Q96HJ9 113 aa8.42□□□□□ -1.06
UFD1-209ENST00000489406 HSPB11Q9Y547 144 aa8.42□□□□□ -1.06
UFD1-209ENST00000489406 IGKV2D-26A0A0A0MRZ7 120 aa8.41□□□□□ -1.06
UFD1-209ENST00000489406 APCSP02743 223 aa8.41□□□□□ -1.06
UFD1-209ENST00000489406 TLX1NBP0CAT3 122 aa8.41□□□□□ -1.06
UFD1-209ENST00000489406 CNPY1Q3B7I2 92 aa8.41□□□□□ -1.06
UFD1-209ENST00000489406 TRIQKQ629K1 86 aa8.41□□□□□ -1.06
UFD1-209ENST00000489406 CENPXA8MT69 81 aa8.4□□□□□ -1.06
UFD1-209ENST00000489406 G3V3Q6 166 aa8.4□□□□□ -1.06
UFD1-209ENST00000489406 LTAP01374 205 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms