RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 E9PLD3 99 aa6.16□□□□□ -1.42
VTI1A-207ENST00000489357 HERVK_113P61574 105 aa6.16□□□□□ -1.42
VTI1A-207ENST00000489357 ODF3L2Q3SX64 289 aa6.16□□□□□ -1.42
VTI1A-207ENST00000489357 FAM74A4Q5TZK3 123 aa6.16□□□□□ -1.42
VTI1A-207ENST00000489357 UFSP1Q6NVU6 142 aa6.16□□□□□ -1.42
VTI1A-207ENST00000489357 STHQ8IWL8 128 aa6.16□□□□□ -1.42
VTI1A-207ENST00000489357 C11orf72Q8NBR9 251 aa6.16□□□□□ -1.42
VTI1A-207ENST00000489357 OR11H2Q8NH07 326 aa6.16□□□□□ -1.42
VTI1A-207ENST00000489357 CITED2Q99967 270 aaPredicted RBP6.16□□□□□ -1.42
VTI1A-207ENST00000489357 C1QTNF4Q9BXJ3 329 aa6.16□□□□□ -1.42
VTI1A-207ENST00000489357 TP53TG1Q9Y2A0 90 aa6.16□□□□□ -1.42
VTI1A-207ENST00000489357 PYGO1Q9Y3Y4 419 aa6.16□□□□□ -1.42
VTI1A-207ENST00000489357 RBMY1BA6NDE4 496 aaKnown RBP6.15□□□□□ -1.42
VTI1A-207ENST00000489357 RBMY1EA6NEQ0 496 aaKnown RBP6.15□□□□□ -1.42
VTI1A-207ENST00000489357 H3BRM9 83 aa6.15□□□□□ -1.42
VTI1A-207ENST00000489357 IGLV1-51P01701 117 aa6.15□□□□□ -1.42
VTI1A-207ENST00000489357 IGHV3-53P01767 116 aa6.15□□□□□ -1.42
VTI1A-207ENST00000489357 RBMY1DP0C7P1 496 aaKnown RBP6.15□□□□□ -1.42
VTI1A-207ENST00000489357 RBMY1A1P0DJD3 496 aaKnown RBP6.15□□□□□ -1.42
VTI1A-207ENST00000489357 RBMY1CP0DJD4 496 aa6.15□□□□□ -1.42
VTI1A-207ENST00000489357 RBMY1FQ15415 496 aaKnown RBP6.15□□□□□ -1.42
VTI1A-207ENST00000489357 HIST2H2BDQ6DRA6 164 aa6.15□□□□□ -1.42
VTI1A-207ENST00000489357 MORN3Q6PF18 240 aaPredicted RBP6.15□□□□□ -1.42
VTI1A-207ENST00000489357 NDUFA11Q86Y39 141 aa6.15□□□□□ -1.42
VTI1A-207ENST00000489357 JPT2Q9H910 190 aa6.15□□□□□ -1.42
VTI1A-207ENST00000489357 TRBV25-1A0A075B6N4 114 aa6.14□□□□□ -1.43
VTI1A-207ENST00000489357 PRSS29PA6NIE9 313 aa6.14□□□□□ -1.43
VTI1A-207ENST00000489357 C11orf86A6NJI1 115 aa6.14□□□□□ -1.43
VTI1A-207ENST00000489357 UBE2V1Q13404 147 aa6.14□□□□□ -1.43
VTI1A-207ENST00000489357 NFE4Q86UQ8 179 aa6.14□□□□□ -1.43
VTI1A-207ENST00000489357 PCP2Q8IVA1 136 aa6.14□□□□□ -1.43
VTI1A-207ENST00000489357 C20orf203Q8NBC4 194 aa6.14□□□□□ -1.43
VTI1A-207ENST00000489357 WFDC9Q8NEX5 89 aa6.14□□□□□ -1.43
VTI1A-207ENST00000489357 IL17DQ8TAD2 202 aa6.14□□□□□ -1.43
VTI1A-207ENST00000489357 TMEM263Q8WUH6 116 aaKnown RBP6.14□□□□□ -1.43
VTI1A-207ENST00000489357 LINC01587Q99440 93 aa6.14□□□□□ -1.43
VTI1A-207ENST00000489357 TM2D2Q9BX73 214 aa6.14□□□□□ -1.43
VTI1A-207ENST00000489357 CST9LQ9H4G1 147 aa6.14□□□□□ -1.43
VTI1A-207ENST00000489357 SELENOKQ9Y6D0 94 aa6.14□□□□□ -1.43
VTI1A-207ENST00000489357 IGKV2D-26A0A0A0MRZ7 120 aa6.13□□□□□ -1.43
VTI1A-207ENST00000489357 TRBV10-1A0A0K0K1A3 114 aa6.13□□□□□ -1.43
VTI1A-207ENST00000489357 TAX1BP3O14907 124 aa6.13□□□□□ -1.43
VTI1A-207ENST00000489357 RS1O15537 224 aa6.13□□□□□ -1.43
VTI1A-207ENST00000489357 SPRY2O43597 315 aa6.13□□□□□ -1.43
VTI1A-207ENST00000489357 TSHBP01222 138 aa6.13□□□□□ -1.43
VTI1A-207ENST00000489357 INSL3P51460 131 aa6.13□□□□□ -1.43
VTI1A-207ENST00000489357 SMAGPQ0VAQ4 97 aa6.13□□□□□ -1.43
VTI1A-207ENST00000489357 CFAP126Q5VTH2 177 aa6.13□□□□□ -1.43
VTI1A-207ENST00000489357 GTSCR1Q86UQ5 136 aa6.13□□□□□ -1.43
VTI1A-207ENST00000489357 C11orf44Q8N8P7 122 aa6.13□□□□□ -1.43
VTI1A-207ENST00000489357 CHAC1Q9BUX1 264 aa6.13□□□□□ -1.43
VTI1A-207ENST00000489357 SPANXA1Q9NS26 97 aa6.13□□□□□ -1.43
VTI1A-207ENST00000489357 TNFRSF18Q9Y5U5 241 aa6.13□□□□□ -1.43
VTI1A-207ENST00000489357 MYMXA0A1B0GTQ4 84 aa6.12□□□□□ -1.43
VTI1A-207ENST00000489357 DAZ2Q13117 558 aaKnown RBP6.12□□□□□ -1.43
VTI1A-207ENST00000489357 RNASE8Q8TDE3 154 aaKnown RBP6.12□□□□□ -1.43
VTI1A-207ENST00000489357 SORL1Q92673 2214 aa6.12□□□□□ -1.43
VTI1A-207ENST00000489357 C16orf74Q96GX8 76 aa6.12□□□□□ -1.43
VTI1A-207ENST00000489357 TIMM21Q9BVV7 248 aa6.12□□□□□ -1.43
VTI1A-207ENST00000489357 DNAH3Q8TD57 4116 aa6.12□□□□□ -1.43
VTI1A-207ENST00000489357 IGLV4-69A0A075B6H9 119 aa6.11□□□□□ -1.43
VTI1A-207ENST00000489357 SAP30O75446 220 aa6.11□□□□□ -1.43
VTI1A-207ENST00000489357 PTTG1IPP53801 180 aa6.11□□□□□ -1.43
VTI1A-207ENST00000489357 TRAV8-6A0A0B4J262 113 aa6.1□□□□□ -1.43
VTI1A-207ENST00000489357 A0A1W2PRX2 142 aa6.1□□□□□ -1.43
VTI1A-207ENST00000489357 P0DMU3 169 aa6.1□□□□□ -1.43
VTI1A-207ENST00000489357 FAM231AP0DMU4 169 aa6.1□□□□□ -1.43
VTI1A-207ENST00000489357 FAM231CP0DMU5 169 aa6.1□□□□□ -1.43
VTI1A-207ENST00000489357 GTF2H5Q6ZYL4 71 aa6.1□□□□□ -1.43
VTI1A-207ENST00000489357 CEND1Q8N111 149 aa6.1□□□□□ -1.43
VTI1A-207ENST00000489357 C1orf158Q8N1D5 194 aa6.1□□□□□ -1.43
VTI1A-207ENST00000489357 PRADC1Q9BSG0 188 aa6.1□□□□□ -1.43
VTI1A-207ENST00000489357 VCX2Q9H322 139 aa6.1□□□□□ -1.43
VTI1A-207ENST00000489357 TP73-AS1Q9UF72 201 aa6.1□□□□□ -1.43
VTI1A-207ENST00000489357 TRAV4A0A0B4J268 109 aa6.09□□□□□ -1.43
VTI1A-207ENST00000489357 SMIM13P0DJ93 91 aa6.09□□□□□ -1.43
VTI1A-207ENST00000489357 HTN1P15515 57 aa6.09□□□□□ -1.43
VTI1A-207ENST00000489357 RPL39P62891 51 aaKnown RBP6.09□□□□□ -1.43
VTI1A-207ENST00000489357 MRPS36P82909 103 aaKnown RBP6.09□□□□□ -1.43
VTI1A-207ENST00000489357 COTL1Q14019 142 aa6.09□□□□□ -1.43
VTI1A-207ENST00000489357 VAMP3Q15836 100 aa6.09□□□□□ -1.43
VTI1A-207ENST00000489357 LCE3BQ5TA77 95 aa6.09□□□□□ -1.43
VTI1A-207ENST00000489357 NEGR1Q7Z3B1 354 aa6.09□□□□□ -1.43
VTI1A-207ENST00000489357 DAZ4Q86SG3 579 aaKnown RBP6.09□□□□□ -1.43
VTI1A-207ENST00000489357 AMELXQ99217 191 aa6.09□□□□□ -1.43
VTI1A-207ENST00000489357 DAZ3Q9NR90 486 aaKnown RBP6.09□□□□□ -1.43
VTI1A-207ENST00000489357 SPANXB1Q9NS25 103 aaPredicted RBP6.09□□□□□ -1.43
VTI1A-207ENST00000489357 XCL2Q9UBD3 114 aa6.09□□□□□ -1.43
VTI1A-207ENST00000489357 CSDC2Q9Y534 153 aaKnown RBP6.09□□□□□ -1.43
VTI1A-207ENST00000489357 IGLV4-3A0A075B6K6 122 aa6.08□□□□□ -1.44
VTI1A-207ENST00000489357 TRBV7-3A0A075B6L6 115 aa6.08□□□□□ -1.44
VTI1A-207ENST00000489357 A0A1B0GWB2 263 aa6.08□□□□□ -1.44
VTI1A-207ENST00000489357 AZU1P20160 251 aa6.08□□□□□ -1.44
VTI1A-207ENST00000489357 GCSHP23434 173 aa6.08□□□□□ -1.44
VTI1A-207ENST00000489357 RPL36AP83881 106 aaKnown RBP6.08□□□□□ -1.44
VTI1A-207ENST00000489357 KPRPQ5T749 579 aaPredicted RBP6.08□□□□□ -1.44
VTI1A-207ENST00000489357 OR4C5Q8NGB2 326 aa6.08□□□□□ -1.44
VTI1A-207ENST00000489357 OR5A1Q8NGJ0 315 aa6.08□□□□□ -1.44
VTI1A-207ENST00000489357 RPL36ALQ969Q0 106 aaKnown RBP6.08□□□□□ -1.44
VTI1A-207ENST00000489357 PLEKHB2Q96CS7 222 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms