RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 NIT1Q86X76 327 aa8.45□□□□□ -1.06
COL4A5-206ENST00000489230 RPL39LQ96EH5 51 aaKnown RBP8.45□□□□□ -1.06
COL4A5-206ENST00000489230 TRBV27A0A0K0K1C4 114 aa8.44□□□□□ -1.06
COL4A5-206ENST00000489230 IBA57-AS1B1ANH7 110 aa8.44□□□□□ -1.06
COL4A5-206ENST00000489230 H7C423 109 aa8.44□□□□□ -1.06
COL4A5-206ENST00000489230 POLR2KP53803 58 aaKnown RBP8.44□□□□□ -1.06
COL4A5-206ENST00000489230 SUMO2P61956 95 aaKnown RBP8.44□□□□□ -1.06
COL4A5-206ENST00000489230 TMEM136Q6ZRR5 245 aa8.44□□□□□ -1.06
COL4A5-206ENST00000489230 NTM-AS1Q6ZSK4 140 aa8.44□□□□□ -1.06
COL4A5-206ENST00000489230 SLC7A5P1Q8MH63 180 aa8.44□□□□□ -1.06
COL4A5-206ENST00000489230 ORMDL3Q8N138 153 aa8.44□□□□□ -1.06
COL4A5-206ENST00000489230 TMEM243Q9BU79 118 aa8.44□□□□□ -1.06
COL4A5-206ENST00000489230 TMEM70Q9BUB7 260 aa8.44□□□□□ -1.06
COL4A5-206ENST00000489230 LAMTOR2Q9Y2Q5 125 aa8.44□□□□□ -1.06
COL4A5-206ENST00000489230 TRAV8-3A0A0A6YYJ7 113 aa8.43□□□□□ -1.06
COL4A5-206ENST00000489230 UBE2L6O14933 153 aa8.43□□□□□ -1.06
COL4A5-206ENST00000489230 IGHV3-30P01768 117 aa8.43□□□□□ -1.06
COL4A5-206ENST00000489230 IGHV3-33P01772 117 aa8.43□□□□□ -1.06
COL4A5-206ENST00000489230 IGHV3-30-3P0DP02 117 aa8.43□□□□□ -1.06
COL4A5-206ENST00000489230 IGHV3-30-5P0DP03 117 aa8.43□□□□□ -1.06
COL4A5-206ENST00000489230 AMTP48728 403 aa8.43□□□□□ -1.06
COL4A5-206ENST00000489230 RPL32P62910 135 aaKnown RBP8.43□□□□□ -1.06
COL4A5-206ENST00000489230 LAGE3Q14657 143 aa8.43□□□□□ -1.06
COL4A5-206ENST00000489230 NRACQ8N912 160 aa8.43□□□□□ -1.06
COL4A5-206ENST00000489230 KIR2DL4Q99706 377 aa8.43□□□□□ -1.06
COL4A5-206ENST00000489230 GNB1LQ9BYB4 327 aa8.43□□□□□ -1.06
COL4A5-206ENST00000489230 D6R8Y8 96 aa8.42□□□□□ -1.06
COL4A5-206ENST00000489230 TNFRSF6BO95407 300 aa8.42□□□□□ -1.06
COL4A5-206ENST00000489230 RPS10P46783 165 aaKnown RBP8.42□□□□□ -1.06
COL4A5-206ENST00000489230 SMAGPQ0VAQ4 97 aa8.42□□□□□ -1.06
COL4A5-206ENST00000489230 TM2D2Q9BX73 214 aa8.42□□□□□ -1.06
COL4A5-206ENST00000489230 COX11Q9Y6N1 276 aa8.42□□□□□ -1.06
COL4A5-206ENST00000489230 A0A1B0GUV1 79 aa8.41□□□□□ -1.06
COL4A5-206ENST00000489230 SMKR1H3BMG3 65 aa8.41□□□□□ -1.06
COL4A5-206ENST00000489230 HLA-DQA1P01909 254 aa8.41□□□□□ -1.06
COL4A5-206ENST00000489230 APCSP02743 223 aa8.41□□□□□ -1.06
COL4A5-206ENST00000489230 MT-ND6P03923 174 aa8.41□□□□□ -1.06
COL4A5-206ENST00000489230 FCER1GP30273 86 aa8.41□□□□□ -1.06
COL4A5-206ENST00000489230 Q0VG73 95 aa8.41□□□□□ -1.06
COL4A5-206ENST00000489230 RMI2Q96E14 147 aa8.41□□□□□ -1.06
COL4A5-206ENST00000489230 PRELID3AQ96N28 172 aa8.41□□□□□ -1.06
COL4A5-206ENST00000489230 KRTAP1-5Q9BYS1 174 aa8.41□□□□□ -1.06
COL4A5-206ENST00000489230 RTL8CO15255 209 aa8.4□□□□□ -1.06
COL4A5-206ENST00000489230 GAS8-AS1O95177 125 aa8.4□□□□□ -1.06
COL4A5-206ENST00000489230 GAGE6Q13070 117 aa8.4□□□□□ -1.06
COL4A5-206ENST00000489230 ATRAIDQ6UW56 229 aa8.4□□□□□ -1.06
COL4A5-206ENST00000489230 PRSS29PA6NIE9 313 aa8.39□□□□□ -1.07
COL4A5-206ENST00000489230 PRSS47A8MTI9 375 aa8.39□□□□□ -1.07
COL4A5-206ENST00000489230 RBX1P62877 108 aa8.39□□□□□ -1.07
COL4A5-206ENST00000489230 TMEM18Q96B42 140 aa8.39□□□□□ -1.07
COL4A5-206ENST00000489230 SMCO4Q9NRQ5 59 aa8.39□□□□□ -1.07
COL4A5-206ENST00000489230 KLK12Q9UKR0 248 aa8.39□□□□□ -1.07
COL4A5-206ENST00000489230 TSHBP01222 138 aa8.38□□□□□ -1.07
COL4A5-206ENST00000489230 ANGP03950 147 aaKnown RBP8.38□□□□□ -1.07
COL4A5-206ENST00000489230 RAB5AP20339 215 aa8.38□□□□□ -1.07
COL4A5-206ENST00000489230 AMMECR1LQ6DCA0 310 aa8.38□□□□□ -1.07
COL4A5-206ENST00000489230 TMEM101Q96IK0 257 aa8.38□□□□□ -1.07
COL4A5-206ENST00000489230 DNAH2Q9P225 4427 aa8.38□□□□□ -1.07
COL4A5-206ENST00000489230 FAT2Q9NYQ8 4349 aa8.38□□□□□ -1.07
COL4A5-206ENST00000489230 PKHD1P08F94 4074 aa8.37□□□□□ -1.07
COL4A5-206ENST00000489230 K7EMI3 77 aa8.37□□□□□ -1.07
COL4A5-206ENST00000489230 EREGO14944 169 aa8.37□□□□□ -1.07
COL4A5-206ENST00000489230 PSCAO43653 123 aa8.37□□□□□ -1.07
COL4A5-206ENST00000489230 NPYP01303 97 aa8.37□□□□□ -1.07
COL4A5-206ENST00000489230 CRPP02741 224 aa8.37□□□□□ -1.07
COL4A5-206ENST00000489230 ESDP10768 282 aa8.37□□□□□ -1.07
COL4A5-206ENST00000489230 ZNF25P17030 456 aaPredicted RBP8.37□□□□□ -1.07
COL4A5-206ENST00000489230 MPV17L2Q567V2 206 aa8.37□□□□□ -1.07
COL4A5-206ENST00000489230 SMIM2Q9BVW6 85 aa8.37□□□□□ -1.07
COL4A5-206ENST00000489230 MAP1LC3AQ9H492 121 aa8.37□□□□□ -1.07
COL4A5-206ENST00000489230 G0S2P27469 103 aa8.36□□□□□ -1.07
COL4A5-206ENST00000489230 FABP9Q0Z7S8 132 aa8.36□□□□□ -1.07
COL4A5-206ENST00000489230 MIAQ16674 131 aa8.36□□□□□ -1.07
COL4A5-206ENST00000489230 DEFB104AQ8WTQ1 72 aa8.36□□□□□ -1.07
COL4A5-206ENST00000489230 UBE2WQ96B02 151 aa8.36□□□□□ -1.07
COL4A5-206ENST00000489230 TGIF2-C20orf24A0A0A6YYL0 155 aa8.35□□□□□ -1.07
COL4A5-206ENST00000489230 TRAV8-4A0A0B4J246 113 aa8.35□□□□□ -1.07
COL4A5-206ENST00000489230 A0A1B0GVY2 172 aa8.35□□□□□ -1.07
COL4A5-206ENST00000489230 FGF6P10767 208 aa8.35□□□□□ -1.07
COL4A5-206ENST00000489230 DGAT2L7PQ6IED9 249 aa8.35□□□□□ -1.07
COL4A5-206ENST00000489230 RNASEKQ6P5S7 137 aaKnown RBP8.35□□□□□ -1.07
COL4A5-206ENST00000489230 Q6ZRN7 208 aaPredicted RBP8.35□□□□□ -1.07
COL4A5-206ENST00000489230 LINC00269Q8N2A0 174 aa8.35□□□□□ -1.07
COL4A5-206ENST00000489230 Q8N3U1 123 aa8.35□□□□□ -1.07
COL4A5-206ENST00000489230 Q8N8P6 123 aa8.35□□□□□ -1.07
COL4A5-206ENST00000489230 Q8N976 141 aa8.35□□□□□ -1.07
COL4A5-206ENST00000489230 MRPL18Q9H0U6 180 aaKnown RBP8.35□□□□□ -1.07
COL4A5-206ENST00000489230 Q9HAA7 133 aa8.35□□□□□ -1.07
COL4A5-206ENST00000489230 NXT2Q9NPJ8 142 aaKnown RBP8.35□□□□□ -1.07
COL4A5-206ENST00000489230 TRAPPC1Q9Y5R8 145 aa8.35□□□□□ -1.07
COL4A5-206ENST00000489230 DNAH11Q96DT5 4516 aa8.35□□□□□ -1.07
COL4A5-206ENST00000489230 DYNC1H1Q14204 4646 aaKnown RBP8.34□□□□□ -1.07
COL4A5-206ENST00000489230 MRPL52Q86TS9 123 aaKnown RBP8.34□□□□□ -1.07
COL4A5-206ENST00000489230 PRR34Q9NV39 138 aa8.34□□□□□ -1.07
COL4A5-206ENST00000489230 CSDC2Q9Y534 153 aaKnown RBP8.34□□□□□ -1.07
COL4A5-206ENST00000489230 ABCA13Q86UQ4 5058 aa8.34□□□□□ -1.08
COL4A5-206ENST00000489230 DNAH17Q9UFH2 4485 aa8.33□□□□□ -1.08
COL4A5-206ENST00000489230 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.33□□□□□ -1.08
COL4A5-206ENST00000489230 LOC389332A0A1B0GUA5 103 aa8.33□□□□□ -1.08
COL4A5-206ENST00000489230 IGKV2-29A2NJV5 120 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms