RNA–Protein interactions for RNA: ENST00000489048.1

NEB-215, Transcript of nebulin, humanhuman

TSL 1 (best)

Gene NEB, Length 2,738 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-215ENST00000489048 TEX49A0A1B0GTD5 131 aa7.99□□□□□ -1.13
NEB-215ENST00000489048 H7C423 109 aa7.99□□□□□ -1.13
NEB-215ENST00000489048 COX6CP09669 75 aa7.99□□□□□ -1.13
NEB-215ENST00000489048 NHLRC4P0CG21 123 aaPredicted RBP7.99□□□□□ -1.13
NEB-215ENST00000489048 PROK1P58294 105 aa7.99□□□□□ -1.13
NEB-215ENST00000489048 GAGE2BQ13066 116 aa7.99□□□□□ -1.13
NEB-215ENST00000489048 GAGE2EQ4V326 116 aa7.99□□□□□ -1.13
NEB-215ENST00000489048 TMEM61Q8N0U2 210 aa7.99□□□□□ -1.13
NEB-215ENST00000489048 DNAJC30Q96LL9 226 aa7.99□□□□□ -1.13
NEB-215ENST00000489048 LINC00467Q9BRT7 94 aa7.99□□□□□ -1.13
NEB-215ENST00000489048 GAGE2DQ9UEU5 116 aa7.99□□□□□ -1.13
NEB-215ENST00000489048 LST1O00453 97 aa7.99□□□□□ -1.13
NEB-215ENST00000489048 ATP5J2P56134 94 aa7.99□□□□□ -1.13
NEB-215ENST00000489048 LY6DQ14210 128 aa7.99□□□□□ -1.13
NEB-215ENST00000489048 TRAV4A0A0B4J268 109 aa7.98□□□□□ -1.13
NEB-215ENST00000489048 IGHV4-59P01825 116 aa7.98□□□□□ -1.13
NEB-215ENST00000489048 GNLYP22749 145 aa7.98□□□□□ -1.13
NEB-215ENST00000489048 TIRAPP58753 221 aa7.98□□□□□ -1.13
NEB-215ENST00000489048 CEMP1Q6PRD7 247 aaPredicted RBP7.98□□□□□ -1.13
NEB-215ENST00000489048 C2orf82Q6UX34 121 aa7.98□□□□□ -1.13
NEB-215ENST00000489048 NBASA2RRP1 2371 aa7.98□□□□□ -1.13
NEB-215ENST00000489048 FAM240AA0A1B0GVK7 77 aa7.98□□□□□ -1.13
NEB-215ENST00000489048 CRLF1O75462 422 aa7.98□□□□□ -1.13
NEB-215ENST00000489048 GAGE5Q13069 117 aa7.98□□□□□ -1.13
NEB-215ENST00000489048 GAGE6Q13070 117 aa7.98□□□□□ -1.13
NEB-215ENST00000489048 DEFB112Q30KQ8 113 aa7.98□□□□□ -1.13
NEB-215ENST00000489048 BEX4Q9NWD9 120 aaPredicted RBP7.98□□□□□ -1.13
NEB-215ENST00000489048 IGHV3-73A0A0B4J1V6 119 aa7.97□□□□□ -1.13
NEB-215ENST00000489048 PRSS2P07478 247 aa7.97□□□□□ -1.13
NEB-215ENST00000489048 HOXD3P31249 432 aaPredicted RBP7.97□□□□□ -1.13
NEB-215ENST00000489048 NDUFV3P56181 108 aaKnown RBP7.97□□□□□ -1.13
NEB-215ENST00000489048 ZNF415Q09FC8 603 aa7.97□□□□□ -1.13
NEB-215ENST00000489048 UBE2E2Q96LR5 201 aa7.97□□□□□ -1.13
NEB-215ENST00000489048 NDUFA1O15239 70 aa7.97□□□□□ -1.13
NEB-215ENST00000489048 Q6ZSN1 163 aa7.97□□□□□ -1.13
NEB-215ENST00000489048 J3QKU1 62 aa7.96□□□□□ -1.13
NEB-215ENST00000489048 PRORYQ9H606 182 aa7.96□□□□□ -1.13
NEB-215ENST00000489048 ATRXP46100 2492 aa7.96□□□□□ -1.13
NEB-215ENST00000489048 RBMY1BA6NDE4 496 aaKnown RBP7.96□□□□□ -1.14
NEB-215ENST00000489048 RBMY1EA6NEQ0 496 aaKnown RBP7.96□□□□□ -1.14
NEB-215ENST00000489048 KNCNA6PVL3 124 aa7.96□□□□□ -1.14
NEB-215ENST00000489048 IGHV3-53P01767 116 aa7.96□□□□□ -1.14
NEB-215ENST00000489048 RBMY1DP0C7P1 496 aaKnown RBP7.96□□□□□ -1.14
NEB-215ENST00000489048 BEAN1Q3B7T3 259 aa7.96□□□□□ -1.14
NEB-215ENST00000489048 RNASE13Q5GAN3 156 aaKnown RBP7.96□□□□□ -1.14
NEB-215ENST00000489048 COL6A6A6NMZ7 2263 aa7.96□□□□□ -1.14
NEB-215ENST00000489048 FAM19A3Q7Z5A8 133 aa7.95□□□□□ -1.14
NEB-215ENST00000489048 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.95□□□□□ -1.14
NEB-215ENST00000489048 IGKV2-29A2NJV5 120 aaPredicted RBP7.95□□□□□ -1.14
NEB-215ENST00000489048 DSCR9P59020 149 aa7.95□□□□□ -1.14
NEB-215ENST00000489048 C15orf53Q8NAA6 179 aa7.95□□□□□ -1.14
NEB-215ENST00000489048 C11orf72Q8NBR9 251 aa7.95□□□□□ -1.14
NEB-215ENST00000489048 DUX3Q96PT4 197 aa7.95□□□□□ -1.14
NEB-215ENST00000489048 VPS13CQ709C8 3753 aa7.95□□□□□ -1.14
NEB-215ENST00000489048 PRRC2AP48634 2157 aaKnown RBP7.95□□□□□ -1.14
NEB-215ENST00000489048 A8MZ25 164 aa7.94□□□□□ -1.14
NEB-215ENST00000489048 RS1O15537 224 aa7.94□□□□□ -1.14
NEB-215ENST00000489048 DEFB131AP59861 70 aa7.94□□□□□ -1.14
NEB-215ENST00000489048 Q9UF83 564 aa7.94□□□□□ -1.14
NEB-215ENST00000489048 DOPEY2Q9Y3R5 2298 aa7.94□□□□□ -1.14
NEB-215ENST00000489048 IGLV5-39A0A0G2JS06 123 aa7.94□□□□□ -1.14
NEB-215ENST00000489048 DUX5Q96PT3 197 aa7.94□□□□□ -1.14
NEB-215ENST00000489048 ZNF702PQ9H963 129 aa7.94□□□□□ -1.14
NEB-215ENST00000489048 NACAE9PAV3 2078 aa7.94□□□□□ -1.14
NEB-215ENST00000489048 IGF2RP11717 2491 aa7.94□□□□□ -1.14
NEB-215ENST00000489048 J3QLI3 93 aa7.94□□□□□ -1.14
NEB-215ENST00000489048 Q6ZSV7 163 aa7.94□□□□□ -1.14
NEB-215ENST00000489048 CLEC2BQ92478 149 aa7.94□□□□□ -1.14
NEB-215ENST00000489048 TMEM101Q96IK0 257 aa7.94□□□□□ -1.14
NEB-215ENST00000489048 CDKN2A-AS1Q9UH64 79 aa7.94□□□□□ -1.14
NEB-215ENST00000489048 LINC01356Q8N9X3 169 aa7.93□□□□□ -1.14
NEB-215ENST00000489048 VPREB3Q9UKI3 123 aa7.93□□□□□ -1.14
NEB-215ENST00000489048 SPTAN1Q13813 2472 aaKnown RBP7.93□□□□□ -1.14
NEB-215ENST00000489048 TTC32Q5I0X7 151 aa7.93□□□□□ -1.14
NEB-215ENST00000489048 CITED2Q99967 270 aaPredicted RBP7.93□□□□□ -1.14
NEB-215ENST00000489048 PPDPFQ9H3Y8 114 aa7.93□□□□□ -1.14
NEB-215ENST00000489048 HTN1P15515 57 aa7.92□□□□□ -1.14
NEB-215ENST00000489048 NPC2P61916 151 aa7.92□□□□□ -1.14
NEB-215ENST00000489048 A0A096LNT2 108 aa7.92□□□□□ -1.14
NEB-215ENST00000489048 HERVK_113P63121 156 aa7.92□□□□□ -1.14
NEB-215ENST00000489048 CIRBPQ14011 172 aaKnown RBP7.92□□□□□ -1.14
NEB-215ENST00000489048 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.92□□□□□ -1.14
NEB-215ENST00000489048 LINC00308Q8TCZ7 52 aa7.92□□□□□ -1.14
NEB-215ENST00000489048 AKAP6Q13023 2319 aa7.91□□□□□ -1.14
NEB-215ENST00000489048 GAGE12JA6NER3 117 aa7.91□□□□□ -1.14
NEB-215ENST00000489048 GAGE7O76087 117 aa7.91□□□□□ -1.14
NEB-215ENST00000489048 GAGE12FP0CL80 117 aa7.91□□□□□ -1.14
NEB-215ENST00000489048 GAGE12GP0CL81 117 aa7.91□□□□□ -1.14
NEB-215ENST00000489048 GAGE12IP0CL82 117 aa7.91□□□□□ -1.14
NEB-215ENST00000489048 GAGE4Q13068 117 aa7.91□□□□□ -1.14
NEB-215ENST00000489048 COPS9Q8WXC6 57 aa7.91□□□□□ -1.14
NEB-215ENST00000489048 IGHV3OR16-12A0A075B7B8 117 aa7.91□□□□□ -1.14
NEB-215ENST00000489048 FSHBP01225 129 aa7.91□□□□□ -1.14
NEB-215ENST00000489048 TRBV7-7A0A0K0K1E9 115 aa7.9□□□□□ -1.14
NEB-215ENST00000489048 PRM2P04554 102 aa7.9□□□□□ -1.14
NEB-215ENST00000489048 SLURP1P55000 103 aa7.9□□□□□ -1.14
NEB-215ENST00000489048 Q6YL49 198 aa7.9□□□□□ -1.14
NEB-215ENST00000489048 CSDC2Q9Y534 153 aaKnown RBP7.9□□□□□ -1.14
NEB-215ENST00000489048 IGHV3-38A0A0C4DH36 116 aa7.9□□□□□ -1.15
NEB-215ENST00000489048 COX7A2LO14548 114 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms