RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 TRBV7-7A0A0K0K1E9 115 aa14.39□□□□□ -0.11
HMG20B-213ENST00000488973 IGHV3-64A0A075B6Q5 118 aa14.38□□□□□ -0.11
HMG20B-213ENST00000488973 IGHV4-61A0A0C4DH41 118 aa14.38□□□□□ -0.11
HMG20B-213ENST00000488973 SNRPD3P62318 126 aaKnown RBP14.38□□□□□ -0.11
HMG20B-213ENST00000488973 ATXN8Q156A1 80 aa14.38□□□□□ -0.11
HMG20B-213ENST00000488973 C9orf153Q5TBE3 101 aa14.38□□□□□ -0.11
HMG20B-213ENST00000488973 A0A0J9YXY3 114 aa14.37□□□□□ -0.11
HMG20B-213ENST00000488973 C3orf22Q8N5N4 141 aa14.37□□□□□ -0.11
HMG20B-213ENST00000488973 PIMREGQ9BSJ6 248 aa14.37□□□□□ -0.11
HMG20B-213ENST00000488973 H7C2G1 150 aa14.37□□□□□ -0.11
HMG20B-213ENST00000488973 HERVK_113P63121 156 aa14.37□□□□□ -0.11
HMG20B-213ENST00000488973 MRAPQ8TCY5 172 aa14.37□□□□□ -0.11
HMG20B-213ENST00000488973 ZNF580Q9UK33 172 aa14.37□□□□□ -0.11
HMG20B-213ENST00000488973 PYGO1Q9Y3Y4 419 aa14.37□□□□□ -0.11
HMG20B-213ENST00000488973 F5H768 121 aa14.36□□□□□ -0.11
HMG20B-213ENST00000488973 IGKV3-20P01619 116 aa14.36□□□□□ -0.11
HMG20B-213ENST00000488973 CELSR1Q9NYQ6 3014 aa14.36□□□□□ -0.11
HMG20B-213ENST00000488973 TRBV30A0A0K0K1B3 111 aa14.35□□□□□ -0.11
HMG20B-213ENST00000488973 K7EQG2 157 aa14.35□□□□□ -0.11
HMG20B-213ENST00000488973 UQCRQO14949 82 aa14.35□□□□□ -0.11
HMG20B-213ENST00000488973 Q1RN00 199 aa14.35□□□□□ -0.11
HMG20B-213ENST00000488973 PRRC2AP48634 2157 aaKnown RBP14.35□□□□□ -0.11
HMG20B-213ENST00000488973 IGHV3-30-3P0DP02 117 aa14.35□□□□□ -0.11
HMG20B-213ENST00000488973 LINC01620Q4KN68 170 aa14.35□□□□□ -0.11
HMG20B-213ENST00000488973 EDA2RQ9HAV5 297 aa14.35□□□□□ -0.11
HMG20B-213ENST00000488973 SPINK13Q1W4C9 94 aa14.34□□□□□ -0.11
HMG20B-213ENST00000488973 NTN5Q8WTR8 489 aaPredicted RBP14.34□□□□□ -0.11
HMG20B-213ENST00000488973 PSMB8P28062 276 aa14.34□□□□□ -0.11
HMG20B-213ENST00000488973 MRPS36P82909 103 aaKnown RBP14.34□□□□□ -0.11
HMG20B-213ENST00000488973 RNF152Q8N8N0 203 aa14.34□□□□□ -0.11
HMG20B-213ENST00000488973 LINC00526Q96FQ7 95 aa14.34□□□□□ -0.11
HMG20B-213ENST00000488973 TIMM21Q9BVV7 248 aa14.34□□□□□ -0.11
HMG20B-213ENST00000488973 IMUPQ9GZP8 106 aa14.34□□□□□ -0.11
HMG20B-213ENST00000488973 TRGV11A0A075B6L2 103 aa14.33□□□□□ -0.12
HMG20B-213ENST00000488973 LITAFQ99732 161 aa14.33□□□□□ -0.12
HMG20B-213ENST00000488973 ELANEP08246 267 aa14.33□□□□□ -0.12
HMG20B-213ENST00000488973 FAM240AA0A1B0GVK7 77 aa14.32□□□□□ -0.12
HMG20B-213ENST00000488973 C10orf105Q8TEF2 133 aa14.32□□□□□ -0.12
HMG20B-213ENST00000488973 DUX5Q96PT3 197 aa14.32□□□□□ -0.12
HMG20B-213ENST00000488973 TRBV10-2A0A0K0K1G8 114 aa14.31□□□□□ -0.12
HMG20B-213ENST00000488973 CD28P10747 220 aa14.31□□□□□ -0.12
HMG20B-213ENST00000488973 FAM104AQ969W3 186 aa14.31□□□□□ -0.12
HMG20B-213ENST00000488973 TRIAP1O43715 76 aa14.3□□□□□ -0.12
HMG20B-213ENST00000488973 IGHV1-58A0A0C4DH39 117 aa14.3□□□□□ -0.12
HMG20B-213ENST00000488973 VPS13CQ709C8 3753 aa14.29□□□□□ -0.12
HMG20B-213ENST00000488973 F8WDY8 70 aa14.29□□□□□ -0.12
HMG20B-213ENST00000488973 DOPEY2Q9Y3R5 2298 aa14.29□□□□□ -0.12
HMG20B-213ENST00000488973 KIR2DL5BQ8NHK3 375 aa14.29□□□□□ -0.12
HMG20B-213ENST00000488973 TMEM89A2RUT3 159 aa14.28□□□□□ -0.12
HMG20B-213ENST00000488973 ATP5G1P05496 136 aa14.28□□□□□ -0.12
HMG20B-213ENST00000488973 ADARB2-AS1A8MUL3 147 aa14.27□□□□□ -0.12
HMG20B-213ENST00000488973 MSMBP08118 114 aa14.27□□□□□ -0.12
HMG20B-213ENST00000488973 BEX4Q9NWD9 120 aaPredicted RBP14.27□□□□□ -0.12
HMG20B-213ENST00000488973 TRAV8-3A0A0A6YYJ7 113 aa14.27□□□□□ -0.13
HMG20B-213ENST00000488973 PRSS2P07478 247 aa14.27□□□□□ -0.13
HMG20B-213ENST00000488973 ACACBO00763 2458 aa14.27□□□□□ -0.13
HMG20B-213ENST00000488973 H3BMM0 161 aa14.26□□□□□ -0.13
HMG20B-213ENST00000488973 UBE2WQ96B02 151 aa14.26□□□□□ -0.13
HMG20B-213ENST00000488973 NDUFA12Q9UI09 145 aa14.26□□□□□ -0.13
HMG20B-213ENST00000488973 ICOSQ9Y6W8 199 aa14.26□□□□□ -0.13
HMG20B-213ENST00000488973 TINCRA0A1B0GVN0 87 aa14.26□□□□□ -0.13
HMG20B-213ENST00000488973 ADAMTSL4-AS1Q5T5F5 129 aa14.26□□□□□ -0.13
HMG20B-213ENST00000488973 TEX49A0A1B0GTD5 131 aa14.25□□□□□ -0.13
HMG20B-213ENST00000488973 FAM236AA0A1B0GUQ0 79 aa14.25□□□□□ -0.13
HMG20B-213ENST00000488973 FAM236BA0A1B0GV22 79 aa14.25□□□□□ -0.13
HMG20B-213ENST00000488973 MIAQ16674 131 aa14.25□□□□□ -0.13
HMG20B-213ENST00000488973 VSIG2Q96IQ7 327 aa14.25□□□□□ -0.13
HMG20B-213ENST00000488973 NACAE9PAV3 2078 aa14.25□□□□□ -0.13
HMG20B-213ENST00000488973 CCL19Q99731 98 aa14.24□□□□□ -0.13
HMG20B-213ENST00000488973 CFAP46Q8IYW2 2715 aa14.24□□□□□ -0.13
HMG20B-213ENST00000488973 COX6CP09669 75 aa14.24□□□□□ -0.13
HMG20B-213ENST00000488973 IGSF10Q6WRI0 2623 aa14.24□□□□□ -0.13
HMG20B-213ENST00000488973 CEMP1Q6PRD7 247 aaPredicted RBP14.23□□□□□ -0.13
HMG20B-213ENST00000488973 C10orf99Q6UWK7 81 aa14.23□□□□□ -0.13
HMG20B-213ENST00000488973 IGHV4-30-2A0A087WSY4 118 aa14.23□□□□□ -0.13
HMG20B-213ENST00000488973 IGHV3-73A0A0B4J1V6 119 aa14.23□□□□□ -0.13
HMG20B-213ENST00000488973 H3BT86 120 aa14.23□□□□□ -0.13
HMG20B-213ENST00000488973 RBMY1A1P0DJD3 496 aaKnown RBP14.23□□□□□ -0.13
HMG20B-213ENST00000488973 RBMY1CP0DJD4 496 aa14.23□□□□□ -0.13
HMG20B-213ENST00000488973 SYNJ2BPP57105 145 aa14.23□□□□□ -0.13
HMG20B-213ENST00000488973 RBMY1FQ15415 496 aaKnown RBP14.23□□□□□ -0.13
HMG20B-213ENST00000488973 C2orf82Q6UX34 121 aa14.23□□□□□ -0.13
HMG20B-213ENST00000488973 SORL1Q92673 2214 aa14.22□□□□□ -0.13
HMG20B-213ENST00000488973 PROK1P58294 105 aa14.22□□□□□ -0.13
HMG20B-213ENST00000488973 BBC3Q96PG8 261 aaPredicted RBP14.22□□□□□ -0.13
HMG20B-213ENST00000488973 H7C423 109 aa14.22□□□□□ -0.13
HMG20B-213ENST00000488973 AVPP01185 164 aa14.22□□□□□ -0.13
HMG20B-213ENST00000488973 UBE2D4Q9Y2X8 147 aa14.22□□□□□ -0.13
HMG20B-213ENST00000488973 TIMM17BO60830 172 aa14.21□□□□□ -0.13
HMG20B-213ENST00000488973 CRYGAP11844 174 aa14.21□□□□□ -0.13
HMG20B-213ENST00000488973 PIK3CD-AS1Q5SR53 167 aa14.21□□□□□ -0.13
HMG20B-213ENST00000488973 CHCHD7Q9BUK0 85 aa14.21□□□□□ -0.13
HMG20B-213ENST00000488973 GAGE2AQ6NT46 116 aa14.21□□□□□ -0.14
HMG20B-213ENST00000488973 RNASE13Q5GAN3 156 aaKnown RBP14.2□□□□□ -0.14
HMG20B-213ENST00000488973 DEFB121Q5J5C9 76 aa14.2□□□□□ -0.14
HMG20B-213ENST00000488973 DUX3Q96PT4 197 aa14.2□□□□□ -0.14
HMG20B-213ENST00000488973 KLK5Q9Y337 293 aaPredicted RBP14.2□□□□□ -0.14
HMG20B-213ENST00000488973 PRB1P04280 392 aa14.2□□□□□ -0.14
HMG20B-213ENST00000488973 TMEM61Q8N0U2 210 aa14.2□□□□□ -0.14
HMG20B-213ENST00000488973 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.19□□□□□ -0.142e-6■■■□□ 18.7
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms