RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 GATD1Q8NB37 220 aa7.74□□□□□ -1.17
CCHCR1-215ENST00000488920 C20orf203Q8NBC4 194 aa7.74□□□□□ -1.17
CCHCR1-215ENST00000488920 GTSF1Q8WW33 167 aa7.74□□□□□ -1.17
CCHCR1-215ENST00000488920 CNFNQ9BYD5 112 aa7.74□□□□□ -1.17
CCHCR1-215ENST00000488920 DMBT1Q9UGM3 2413 aaPredicted RBP7.73□□□□□ -1.17
CCHCR1-215ENST00000488920 COTL1Q14019 142 aa7.73□□□□□ -1.17
CCHCR1-215ENST00000488920 PGLYRP4Q96LB8 373 aa7.73□□□□□ -1.17
CCHCR1-215ENST00000488920 GFRA4Q9GZZ7 299 aa7.73□□□□□ -1.17
CCHCR1-215ENST00000488920 A0A1B0GUV1 79 aa7.72□□□□□ -1.17
CCHCR1-215ENST00000488920 TMEM250H0YL14 139 aa7.72□□□□□ -1.17
CCHCR1-215ENST00000488920 UBE2L6O14933 153 aa7.72□□□□□ -1.17
CCHCR1-215ENST00000488920 GATCO43716 136 aaKnown RBP7.72□□□□□ -1.17
CCHCR1-215ENST00000488920 AMTP48728 403 aa7.72□□□□□ -1.17
CCHCR1-215ENST00000488920 DGAT2L7PQ6IED9 249 aa7.72□□□□□ -1.17
CCHCR1-215ENST00000488920 LYPD6BQ8NI32 183 aa7.72□□□□□ -1.17
CCHCR1-215ENST00000488920 J3QL48 77 aa7.71□□□□□ -1.18
CCHCR1-215ENST00000488920 SMIM15Q7Z3B0 74 aa7.71□□□□□ -1.18
CCHCR1-215ENST00000488920 RPL39LQ96EH5 51 aaKnown RBP7.71□□□□□ -1.18
CCHCR1-215ENST00000488920 TRAV8-4A0A0B4J246 113 aa7.7□□□□□ -1.18
CCHCR1-215ENST00000488920 A8MWL6 223 aa7.7□□□□□ -1.18
CCHCR1-215ENST00000488920 C9orf163Q8N9P6 203 aa7.7□□□□□ -1.18
CCHCR1-215ENST00000488920 CLRN3Q8NCR9 226 aa7.7□□□□□ -1.18
CCHCR1-215ENST00000488920 EIF5A2Q9GZV4 153 aaKnown RBP7.7□□□□□ -1.18
CCHCR1-215ENST00000488920 hDV102S1A0JD36 115 aa7.69□□□□□ -1.18
CCHCR1-215ENST00000488920 KRTAP10-4P60372 401 aaPredicted RBP7.69□□□□□ -1.18
CCHCR1-215ENST00000488920 FAM231DQ6ZW35 169 aa7.69□□□□□ -1.18
CCHCR1-215ENST00000488920 IGKV3OR2-268A0A0C4DH90 116 aa7.68□□□□□ -1.18
CCHCR1-215ENST00000488920 SDIM1Q6ZPB5 146 aa7.68□□□□□ -1.18
CCHCR1-215ENST00000488920 SMIM7Q9BQ49 75 aa7.68□□□□□ -1.18
CCHCR1-215ENST00000488920 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.68□□□□□ -1.18
CCHCR1-215ENST00000488920 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.67□□□□□ -1.18
CCHCR1-215ENST00000488920 IGKV2-29A2NJV5 120 aaPredicted RBP7.67□□□□□ -1.18
CCHCR1-215ENST00000488920 GAGE12HA6NDE8 117 aa7.67□□□□□ -1.18
CCHCR1-215ENST00000488920 PANO1I0J062 215 aa7.67□□□□□ -1.18
CCHCR1-215ENST00000488920 GAS8-AS1O95177 125 aa7.67□□□□□ -1.18
CCHCR1-215ENST00000488920 AMMECR1LQ6DCA0 310 aa7.67□□□□□ -1.18
CCHCR1-215ENST00000488920 TEX261Q6UWH6 196 aa7.67□□□□□ -1.18
CCHCR1-215ENST00000488920 LINC01551Q86U37 167 aa7.67□□□□□ -1.18
CCHCR1-215ENST00000488920 BORCS7Q96B45 105 aa7.67□□□□□ -1.18
CCHCR1-215ENST00000488920 A0A1B0GVG6 124 aa7.66□□□□□ -1.18
CCHCR1-215ENST00000488920 SDHAF1A6NFY7 115 aa7.66□□□□□ -1.18
CCHCR1-215ENST00000488920 ZNF727A8MUV8 499 aa7.66□□□□□ -1.18
CCHCR1-215ENST00000488920 KRTAP29-1A8MX34 341 aaPredicted RBP7.66□□□□□ -1.18
CCHCR1-215ENST00000488920 NCR2O95944 276 aa7.66□□□□□ -1.18
CCHCR1-215ENST00000488920 SLPIP03973 132 aa7.66□□□□□ -1.18
CCHCR1-215ENST00000488920 SRP19P09132 144 aaKnown RBP7.66□□□□□ -1.18
CCHCR1-215ENST00000488920 PMCHP20382 165 aa7.66□□□□□ -1.18
CCHCR1-215ENST00000488920 CNBPP62633 177 aaKnown RBP7.66□□□□□ -1.18
CCHCR1-215ENST00000488920 CT83Q5H943 113 aa7.66□□□□□ -1.18
CCHCR1-215ENST00000488920 RNASEKQ6P5S7 137 aaKnown RBP7.66□□□□□ -1.18
CCHCR1-215ENST00000488920 FAM210AQ96ND0 272 aa7.66□□□□□ -1.18
CCHCR1-215ENST00000488920 AP5S1Q9NUS5 200 aa7.66□□□□□ -1.18
CCHCR1-215ENST00000488920 HIGD1CA8MV81 97 aa7.65□□□□□ -1.18
CCHCR1-215ENST00000488920 I3L3M4 83 aa7.65□□□□□ -1.18
CCHCR1-215ENST00000488920 APCSP02743 223 aa7.65□□□□□ -1.18
CCHCR1-215ENST00000488920 FGF6P10767 208 aa7.65□□□□□ -1.18
CCHCR1-215ENST00000488920 RPL37AP61513 92 aaKnown RBP7.65□□□□□ -1.18
CCHCR1-215ENST00000488920 TSKUQ8WUA8 353 aa7.65□□□□□ -1.18
CCHCR1-215ENST00000488920 DPH3Q96FX2 82 aa7.65□□□□□ -1.18
CCHCR1-215ENST00000488920 IGHV3-64A0A075B6Q5 118 aa7.64□□□□□ -1.19
CCHCR1-215ENST00000488920 TRBV6-5A0A0K0K1A5 114 aa7.64□□□□□ -1.19
CCHCR1-215ENST00000488920 A0A1B0GUT8 65 aa7.64□□□□□ -1.19
CCHCR1-215ENST00000488920 FAM231BA6NCW3 169 aa7.64□□□□□ -1.19
CCHCR1-215ENST00000488920 H7C423 109 aa7.64□□□□□ -1.19
CCHCR1-215ENST00000488920 CHCHD10Q8WYQ3 142 aaPredicted RBP7.64□□□□□ -1.19
CCHCR1-215ENST00000488920 ST20Q9HBF5 79 aa7.64□□□□□ -1.19
CCHCR1-215ENST00000488920 OSTCQ9NRP0 149 aa7.64□□□□□ -1.19
CCHCR1-215ENST00000488920 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.63□□□□□ -1.19
CCHCR1-215ENST00000488920 NDUFS6O75380 124 aaKnown RBP7.63□□□□□ -1.19
CCHCR1-215ENST00000488920 TSHBP01222 138 aa7.63□□□□□ -1.19
CCHCR1-215ENST00000488920 RAB4AP20338 218 aa7.63□□□□□ -1.19
CCHCR1-215ENST00000488920 CFAP161Q6P656 301 aa7.63□□□□□ -1.19
CCHCR1-215ENST00000488920 C15orf56Q8N910 161 aa7.63□□□□□ -1.19
CCHCR1-215ENST00000488920 RNF185Q96GF1 192 aa7.63□□□□□ -1.19
CCHCR1-215ENST00000488920 TMEM191AQ9H0A3 160 aa7.63□□□□□ -1.19
CCHCR1-215ENST00000488920 CHTF8P0CG12 524 aa7.62□□□□□ -1.19
CCHCR1-215ENST00000488920 RPS10P46783 165 aaKnown RBP7.62□□□□□ -1.19
CCHCR1-215ENST00000488920 TMEM241Q24JQ0 296 aa7.62□□□□□ -1.19
CCHCR1-215ENST00000488920 HIGD2BQ4VC39 106 aa7.62□□□□□ -1.19
CCHCR1-215ENST00000488920 AMN1Q8IY45 258 aa7.62□□□□□ -1.19
CCHCR1-215ENST00000488920 TMEM242Q9NWH2 141 aa7.62□□□□□ -1.19
CCHCR1-215ENST00000488920 V9GYV3 84 aa7.62□□□□□ -1.19
CCHCR1-215ENST00000488920 C9JQL5 133 aa7.61□□□□□ -1.19
CCHCR1-215ENST00000488920 SMKR1H3BMG3 65 aa7.61□□□□□ -1.19
CCHCR1-215ENST00000488920 ESDP10768 282 aa7.61□□□□□ -1.19
CCHCR1-215ENST00000488920 RIGQ13278 110 aa7.61□□□□□ -1.19
CCHCR1-215ENST00000488920 NUP35Q8NFH5 326 aa7.61□□□□□ -1.19
CCHCR1-215ENST00000488920 MRAP2Q96G30 205 aa7.61□□□□□ -1.19
CCHCR1-215ENST00000488920 TMEM101Q96IK0 257 aa7.61□□□□□ -1.19
CCHCR1-215ENST00000488920 BTF3L4Q96K17 158 aa7.61□□□□□ -1.19
CCHCR1-215ENST00000488920 ZNF25P17030 456 aaPredicted RBP7.6□□□□□ -1.19
CCHCR1-215ENST00000488920 XCL1P47992 114 aa7.6□□□□□ -1.19
CCHCR1-215ENST00000488920 HNRNPA3P51991 378 aaKnown RBP7.6□□□□□ -1.19
CCHCR1-215ENST00000488920 POLR2KP53803 58 aaKnown RBP7.6□□□□□ -1.19
CCHCR1-215ENST00000488920 FOXI1Q12951 378 aa7.6□□□□□ -1.19
CCHCR1-215ENST00000488920 CIRBPQ14011 172 aaKnown RBP7.6□□□□□ -1.19
CCHCR1-215ENST00000488920 OR5A1Q8NGJ0 315 aa7.6□□□□□ -1.19
CCHCR1-215ENST00000488920 ISOC2Q96AB3 205 aa7.6□□□□□ -1.19
CCHCR1-215ENST00000488920 LRP1Q07954 4544 aaKnown RBP7.59□□□□□ -1.19
CCHCR1-215ENST00000488920 A0A087WYN8 130 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms