RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 A8MWV9 139 aa7.83□□□□□ -1.16
COL21A1-211ENST00000488912 EMP1P54849 157 aa7.83□□□□□ -1.16
COL21A1-211ENST00000488912 ZNF56Q15929 161 aa7.83□□□□□ -1.16
COL21A1-211ENST00000488912 BOD1L2Q8IYS8 172 aa7.83□□□□□ -1.16
COL21A1-211ENST00000488912 NRACQ8N912 160 aa7.83□□□□□ -1.16
COL21A1-211ENST00000488912 F5H697 171 aa7.83□□□□□ -1.16
COL21A1-211ENST00000488912 F8W1H4 67 aa7.83□□□□□ -1.16
COL21A1-211ENST00000488912 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.83□□□□□ -1.16
COL21A1-211ENST00000488912 TNFRSF6BO95407 300 aa7.83□□□□□ -1.16
COL21A1-211ENST00000488912 CFAP126Q5VTH2 177 aa7.83□□□□□ -1.16
COL21A1-211ENST00000488912 SUMO4Q6EEV6 95 aa7.83□□□□□ -1.16
COL21A1-211ENST00000488912 HSPB8Q9UJY1 196 aa7.83□□□□□ -1.16
COL21A1-211ENST00000488912 IGHV3-73A0A0B4J1V6 119 aa7.82□□□□□ -1.16
COL21A1-211ENST00000488912 LOC389332A0A1B0GUA5 103 aa7.82□□□□□ -1.16
COL21A1-211ENST00000488912 SMIM9A6NGZ8 99 aa7.82□□□□□ -1.16
COL21A1-211ENST00000488912 LGALS9BQ3B8N2 356 aa7.82□□□□□ -1.16
COL21A1-211ENST00000488912 KPRPQ5T749 579 aaPredicted RBP7.82□□□□□ -1.16
COL21A1-211ENST00000488912 RNF183Q96D59 192 aa7.82□□□□□ -1.16
COL21A1-211ENST00000488912 RPL39LQ96EH5 51 aaKnown RBP7.82□□□□□ -1.16
COL21A1-211ENST00000488912 OVOL2Q9BRP0 275 aa7.81□□□□□ -1.16
COL21A1-211ENST00000488912 DNHD1Q96M86 4753 aa7.81□□□□□ -1.16
COL21A1-211ENST00000488912 IFI27P40305 119 aaPredicted RBP7.81□□□□□ -1.16
COL21A1-211ENST00000488912 NAA38Q9BRA0 125 aaKnown RBP7.81□□□□□ -1.16
COL21A1-211ENST00000488912 RS1O15537 224 aa7.8□□□□□ -1.16
COL21A1-211ENST00000488912 MAP1LC3AQ9H492 121 aa7.8□□□□□ -1.16
COL21A1-211ENST00000488912 IGHV4-28A0A0C4DH34 117 aa7.8□□□□□ -1.16
COL21A1-211ENST00000488912 DEFB4AO15263 64 aa7.8□□□□□ -1.16
COL21A1-211ENST00000488912 GAGE7O76087 117 aa7.8□□□□□ -1.16
COL21A1-211ENST00000488912 GAGE12FP0CL80 117 aa7.8□□□□□ -1.16
COL21A1-211ENST00000488912 GAGE12GP0CL81 117 aa7.8□□□□□ -1.16
COL21A1-211ENST00000488912 GAGE12IP0CL82 117 aa7.8□□□□□ -1.16
COL21A1-211ENST00000488912 PRSS3P2Q8NHM4 247 aa7.8□□□□□ -1.16
COL21A1-211ENST00000488912 K7EIL1 84 aa7.79□□□□□ -1.16
COL21A1-211ENST00000488912 M0QY20 66 aa7.79□□□□□ -1.16
COL21A1-211ENST00000488912 RHODO00212 210 aa7.79□□□□□ -1.16
COL21A1-211ENST00000488912 Q8NAQ8 132 aa7.79□□□□□ -1.16
COL21A1-211ENST00000488912 RETNQ9HD89 108 aa7.79□□□□□ -1.16
COL21A1-211ENST00000488912 ERG28Q9UKR5 140 aa7.79□□□□□ -1.16
COL21A1-211ENST00000488912 IGHV3-53P01767 116 aa7.79□□□□□ -1.16
COL21A1-211ENST00000488912 SMIM13P0DJ93 91 aa7.79□□□□□ -1.16
COL21A1-211ENST00000488912 Q6ZSN1 163 aa7.79□□□□□ -1.16
COL21A1-211ENST00000488912 TRGV2A0A075B6R0 118 aa7.78□□□□□ -1.16
COL21A1-211ENST00000488912 TRAV4A0A0B4J268 109 aa7.78□□□□□ -1.16
COL21A1-211ENST00000488912 MIFP14174 115 aa7.78□□□□□ -1.16
COL21A1-211ENST00000488912 SUMO2P61956 95 aaKnown RBP7.78□□□□□ -1.16
COL21A1-211ENST00000488912 RAB37Q96AX2 223 aa7.78□□□□□ -1.16
COL21A1-211ENST00000488912 AP5S1Q9NUS5 200 aa7.78□□□□□ -1.16
COL21A1-211ENST00000488912 P0DMU3 169 aa7.78□□□□□ -1.16
COL21A1-211ENST00000488912 FAM231AP0DMU4 169 aa7.78□□□□□ -1.16
COL21A1-211ENST00000488912 FAM231CP0DMU5 169 aa7.78□□□□□ -1.16
COL21A1-211ENST00000488912 ZFP2Q6ZN57 461 aa7.78□□□□□ -1.16
COL21A1-211ENST00000488912 IGLV2-18A0A075B6J9 118 aa7.77□□□□□ -1.17
COL21A1-211ENST00000488912 H0Y8G0 127 aa7.77□□□□□ -1.17
COL21A1-211ENST00000488912 PPP1R17O96001 155 aa7.77□□□□□ -1.17
COL21A1-211ENST00000488912 DEFB130BP0DP73 79 aa7.77□□□□□ -1.17
COL21A1-211ENST00000488912 DEFB130AP0DP74 79 aa7.77□□□□□ -1.17
COL21A1-211ENST00000488912 FAM222AQ5U5X8 452 aa7.77□□□□□ -1.17
COL21A1-211ENST00000488912 PHLDA1Q8WV24 401 aaPredicted RBP7.77□□□□□ -1.17
COL21A1-211ENST00000488912 C20orf78Q9BR46 151 aa7.77□□□□□ -1.17
COL21A1-211ENST00000488912 SMIM2Q9BVW6 85 aa7.77□□□□□ -1.17
COL21A1-211ENST00000488912 CYSLTR1Q9Y271 337 aa7.77□□□□□ -1.17
COL21A1-211ENST00000488912 TP53TG1Q9Y2A0 90 aa7.77□□□□□ -1.17
COL21A1-211ENST00000488912 TENM3Q9P273 2699 aa7.77□□□□□ -1.17
COL21A1-211ENST00000488912 WFDC2Q14508 124 aa7.77□□□□□ -1.17
COL21A1-211ENST00000488912 LINC00612Q8N6U2 182 aa7.77□□□□□ -1.17
COL21A1-211ENST00000488912 EDA2RQ9HAV5 297 aa7.77□□□□□ -1.17
COL21A1-211ENST00000488912 NXT2Q9NPJ8 142 aaKnown RBP7.77□□□□□ -1.17
COL21A1-211ENST00000488912 Q9UF83 564 aa7.77□□□□□ -1.17
COL21A1-211ENST00000488912 A0A096LNJ9 63 aa7.76□□□□□ -1.17
COL21A1-211ENST00000488912 E9PLD3 99 aa7.76□□□□□ -1.17
COL21A1-211ENST00000488912 H7C1H1 209 aa7.76□□□□□ -1.17
COL21A1-211ENST00000488912 GAGE5Q13069 117 aa7.76□□□□□ -1.17
COL21A1-211ENST00000488912 GAGE6Q13070 117 aa7.76□□□□□ -1.17
COL21A1-211ENST00000488912 KRTAP21-3Q3LHN1 58 aa7.76□□□□□ -1.17
COL21A1-211ENST00000488912 SBSPONQ8IVN8 264 aa7.76□□□□□ -1.17
COL21A1-211ENST00000488912 Q8N8P6 123 aa7.76□□□□□ -1.17
COL21A1-211ENST00000488912 DKK2Q9UBU2 259 aa7.76□□□□□ -1.17
COL21A1-211ENST00000488912 TRBV6-5A0A0K0K1A5 114 aa7.75□□□□□ -1.17
COL21A1-211ENST00000488912 LYRM9A8MSI8 78 aa7.75□□□□□ -1.17
COL21A1-211ENST00000488912 DEFB121Q5J5C9 76 aa7.75□□□□□ -1.17
COL21A1-211ENST00000488912 C18orf15Q96N68 181 aa7.75□□□□□ -1.17
COL21A1-211ENST00000488912 HIGD1BQ9P298 99 aa7.75□□□□□ -1.17
COL21A1-211ENST00000488912 SS18L2Q9UHA2 77 aa7.75□□□□□ -1.17
COL21A1-211ENST00000488912 CELA1Q9UNI1 258 aa7.75□□□□□ -1.17
COL21A1-211ENST00000488912 SDHAF1A6NFY7 115 aa7.75□□□□□ -1.17
COL21A1-211ENST00000488912 LINC01546A6NGU7 62 aa7.75□□□□□ -1.17
COL21A1-211ENST00000488912 LGALS9CQ6DKI2 356 aa7.75□□□□□ -1.17
COL21A1-211ENST00000488912 CDIP1Q9H305 208 aa7.75□□□□□ -1.17
COL21A1-211ENST00000488912 POLR2KP53803 58 aaKnown RBP7.74□□□□□ -1.17
COL21A1-211ENST00000488912 ATP6V0E2Q8NHE4 81 aa7.74□□□□□ -1.17
COL21A1-211ENST00000488912 PRO0461Q9UI25 63 aa7.74□□□□□ -1.17
COL21A1-211ENST00000488912 NEXN-AS1Q8NBZ9 246 aa7.74□□□□□ -1.17
COL21A1-211ENST00000488912 DEFB104AQ8WTQ1 72 aa7.74□□□□□ -1.17
COL21A1-211ENST00000488912 SPINK8P0C7L1 97 aa7.73□□□□□ -1.17
COL21A1-211ENST00000488912 RPL32P62910 135 aaKnown RBP7.73□□□□□ -1.17
COL21A1-211ENST00000488912 HERV-K104P63124 156 aa7.73□□□□□ -1.17
COL21A1-211ENST00000488912 SLC25A29Q8N8R3 303 aa7.73□□□□□ -1.17
COL21A1-211ENST00000488912 MRAPQ8TCY5 172 aa7.73□□□□□ -1.17
COL21A1-211ENST00000488912 TRBV27A0A0K0K1C4 114 aa7.73□□□□□ -1.17
COL21A1-211ENST00000488912 K7EQD1 137 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms