RNA–Protein interactions for RNA: ENST00000488809.2

PTCH1-211, Transcript of patched 1, humanhuman

TSL 3

Gene PTCH1, Length 301 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-211ENST00000488809 RASL11AQ6T310 242 aa4.03□□□□□ -1.76
PTCH1-211ENST00000488809 INO80EQ8NBZ0 244 aaPredicted RBP4.03□□□□□ -1.76
PTCH1-211ENST00000488809 CARD19Q96LW7 228 aa4.03□□□□□ -1.76
PTCH1-211ENST00000488809 MAP1LC3BQ9GZQ8 125 aa4.03□□□□□ -1.76
PTCH1-211ENST00000488809 GFRA4Q9GZZ7 299 aa4.03□□□□□ -1.76
PTCH1-211ENST00000488809 MUC2Q02817 5179 aa4.02□□□□□ -1.77
PTCH1-211ENST00000488809 IGHV1-58A0A0C4DH39 117 aa4.02□□□□□ -1.77
PTCH1-211ENST00000488809 TRGC1P0CF51 173 aa4.02□□□□□ -1.77
PTCH1-211ENST00000488809 RPS20P60866 119 aaKnown RBP4.02□□□□□ -1.77
PTCH1-211ENST00000488809 BAGE2Q86Y30 109 aa4.02□□□□□ -1.77
PTCH1-211ENST00000488809 CHCHD10Q8WYQ3 142 aaPredicted RBP4.02□□□□□ -1.77
PTCH1-211ENST00000488809 ISOC2Q96AB3 205 aa4.02□□□□□ -1.77
PTCH1-211ENST00000488809 TPPP3Q9BW30 176 aa4.02□□□□□ -1.77
PTCH1-211ENST00000488809 NIT2Q9NQR4 276 aa4.02□□□□□ -1.77
PTCH1-211ENST00000488809 XKRY2A2RUG3 117 aa4.01□□□□□ -1.77
PTCH1-211ENST00000488809 H7C423 109 aa4.01□□□□□ -1.77
PTCH1-211ENST00000488809 ZNF561-AS1K7EIQ3 104 aa4.01□□□□□ -1.77
PTCH1-211ENST00000488809 MT-ND6P03923 174 aa4.01□□□□□ -1.77
PTCH1-211ENST00000488809 RPL7L1Q6DKI1 246 aaKnown RBP4.01□□□□□ -1.77
PTCH1-211ENST00000488809 RNASEKQ6P5S7 137 aaKnown RBP4.01□□□□□ -1.77
PTCH1-211ENST00000488809 FER1L6-AS1Q8NA97 138 aa4.01□□□□□ -1.77
PTCH1-211ENST00000488809 BTF3L4Q96K17 158 aa4.01□□□□□ -1.77
PTCH1-211ENST00000488809 MLST8Q9BVC4 326 aa4.01□□□□□ -1.77
PTCH1-211ENST00000488809 LOC107984640A0A0U1RRK4 108 aa4□□□□□ -1.77
PTCH1-211ENST00000488809 F2Z2F3 143 aa4□□□□□ -1.77
PTCH1-211ENST00000488809 PAGE4O60829 102 aa4□□□□□ -1.77
PTCH1-211ENST00000488809 NCR2O95944 276 aa4□□□□□ -1.77
PTCH1-211ENST00000488809 APCSP02743 223 aa4□□□□□ -1.77
PTCH1-211ENST00000488809 ZNF25P17030 456 aaPredicted RBP4□□□□□ -1.77
PTCH1-211ENST00000488809 PTTG1IPP53801 180 aa4□□□□□ -1.77
PTCH1-211ENST00000488809 SYCNQ0VAF6 134 aa4□□□□□ -1.77
PTCH1-211ENST00000488809 OR5A1Q8NGJ0 315 aa4□□□□□ -1.77
PTCH1-211ENST00000488809 TSKUQ8WUA8 353 aa4□□□□□ -1.77
PTCH1-211ENST00000488809 DIRC1Q969H9 104 aa4□□□□□ -1.77
PTCH1-211ENST00000488809 TMEM101Q96IK0 257 aa4□□□□□ -1.77
PTCH1-211ENST00000488809 FAT4Q6V0I7 4981 aa3.99□□□□□ -1.77
PTCH1-211ENST00000488809 SCO2A0A1W2PP80 73 aa3.99□□□□□ -1.77
PTCH1-211ENST00000488809 FGF6P10767 208 aa3.99□□□□□ -1.77
PTCH1-211ENST00000488809 XCL1P47992 114 aa3.99□□□□□ -1.77
PTCH1-211ENST00000488809 CAMPP49913 170 aa3.99□□□□□ -1.77
PTCH1-211ENST00000488809 EIF5AP63241 154 aaKnown RBP3.99□□□□□ -1.77
PTCH1-211ENST00000488809 FOXI1Q12951 378 aa3.99□□□□□ -1.77
PTCH1-211ENST00000488809 GAGE2BQ13066 116 aa3.99□□□□□ -1.77
PTCH1-211ENST00000488809 SS18Q15532 418 aa3.99□□□□□ -1.77
PTCH1-211ENST00000488809 PRR4Q16378 134 aa3.99□□□□□ -1.77
PTCH1-211ENST00000488809 C1orf137Q5JT78 98 aa3.99□□□□□ -1.77
PTCH1-211ENST00000488809 EIF5AL1Q6IS14 154 aaKnown RBP3.99□□□□□ -1.77
PTCH1-211ENST00000488809 IGLV4-69A0A075B6H9 119 aa3.98□□□□□ -1.77
PTCH1-211ENST00000488809 IGLV1-50A0A075B6I6 118 aa3.98□□□□□ -1.77
PTCH1-211ENST00000488809 FXYD6-FXYD2A0A087WZ82 144 aa3.98□□□□□ -1.77
PTCH1-211ENST00000488809 TRAV1-1A0A0B4J248 108 aa3.98□□□□□ -1.77
PTCH1-211ENST00000488809 CCL25O15444 150 aa3.98□□□□□ -1.77
PTCH1-211ENST00000488809 IGLC6P0CF74 106 aa3.98□□□□□ -1.77
PTCH1-211ENST00000488809 NTF3P20783 257 aa3.98□□□□□ -1.77
PTCH1-211ENST00000488809 MALP21145 153 aa3.98□□□□□ -1.77
PTCH1-211ENST00000488809 RPL13AP40429 203 aaKnown RBP3.98□□□□□ -1.77
PTCH1-211ENST00000488809 UBE2D1P51668 147 aa3.98□□□□□ -1.77
PTCH1-211ENST00000488809 SMIM15Q7Z3B0 74 aa3.98□□□□□ -1.77
PTCH1-211ENST00000488809 OR2D3Q8NGH3 330 aa3.98□□□□□ -1.77
PTCH1-211ENST00000488809 FAM210AQ96ND0 272 aa3.98□□□□□ -1.77
PTCH1-211ENST00000488809 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.97□□□□□ -1.77
PTCH1-211ENST00000488809 KRTAP9-6A0A140TA67 174 aa3.97□□□□□ -1.77
PTCH1-211ENST00000488809 LINC00959A0A1B0GUT2 108 aa3.97□□□□□ -1.77
PTCH1-211ENST00000488809 IGKV2-29A2NJV5 120 aaPredicted RBP3.97□□□□□ -1.77
PTCH1-211ENST00000488809 H0Y9J4 135 aa3.97□□□□□ -1.77
PTCH1-211ENST00000488809 APOMO95445 188 aa3.97□□□□□ -1.77
PTCH1-211ENST00000488809 GIPP09681 153 aaPredicted RBP3.97□□□□□ -1.77
PTCH1-211ENST00000488809 RPL35P42766 123 aaKnown RBP3.97□□□□□ -1.77
PTCH1-211ENST00000488809 IFITM3Q01628 133 aa3.97□□□□□ -1.77
PTCH1-211ENST00000488809 C9orf116Q5BN46 136 aaPredicted RBP3.97□□□□□ -1.77
PTCH1-211ENST00000488809 TEX261Q6UWH6 196 aa3.97□□□□□ -1.77
PTCH1-211ENST00000488809 CD164L2Q6UWJ8 174 aa3.97□□□□□ -1.77
PTCH1-211ENST00000488809 TMUB2Q71RG4 321 aa3.97□□□□□ -1.77
PTCH1-211ENST00000488809 KCNRGQ8N5I3 272 aa3.97□□□□□ -1.77
PTCH1-211ENST00000488809 PRR26Q8N8Z3 221 aa3.97□□□□□ -1.77
PTCH1-211ENST00000488809 SFT2D1Q8WV19 159 aa3.97□□□□□ -1.77
PTCH1-211ENST00000488809 SMIM12Q96EX1 92 aa3.97□□□□□ -1.77
PTCH1-211ENST00000488809 LINC00526Q96FQ7 95 aa3.97□□□□□ -1.77
PTCH1-211ENST00000488809 CAMK2N2Q96S95 79 aa3.97□□□□□ -1.77
PTCH1-211ENST00000488809 BIN3Q9NQY0 253 aa3.97□□□□□ -1.77
PTCH1-211ENST00000488809 ALG5Q9Y673 324 aa3.97□□□□□ -1.77
PTCH1-211ENST00000488809 UMAD1C9J7I0 102 aa3.96□□□□□ -1.78
PTCH1-211ENST00000488809 IFNA1P01562 189 aa3.96□□□□□ -1.78
PTCH1-211ENST00000488809 IGLV7-43P04211 117 aa3.96□□□□□ -1.78
PTCH1-211ENST00000488809 RPL18AQ02543 176 aaKnown RBP3.96□□□□□ -1.78
PTCH1-211ENST00000488809 SMAGPQ0VAQ4 97 aa3.96□□□□□ -1.78
PTCH1-211ENST00000488809 TWIST1Q15672 202 aa3.96□□□□□ -1.78
PTCH1-211ENST00000488809 LYZL1Q6UWQ5 148 aa3.96□□□□□ -1.78
PTCH1-211ENST00000488809 Q6ZNX1 250 aa3.96□□□□□ -1.78
PTCH1-211ENST00000488809 FAM213BQ8TBF2 198 aa3.96□□□□□ -1.78
PTCH1-211ENST00000488809 MRAP2Q96G30 205 aa3.96□□□□□ -1.78
PTCH1-211ENST00000488809 A0A1B0GV50 99 aa3.95□□□□□ -1.78
PTCH1-211ENST00000488809 A0A1W2PNN7 141 aa3.95□□□□□ -1.78
PTCH1-211ENST00000488809 C19orf71A6NCJ1 209 aa3.95□□□□□ -1.78
PTCH1-211ENST00000488809 SDHAF1A6NFY7 115 aa3.95□□□□□ -1.78
PTCH1-211ENST00000488809 I3L3M4 83 aa3.95□□□□□ -1.78
PTCH1-211ENST00000488809 BCL2P10415 239 aa3.95□□□□□ -1.78
PTCH1-211ENST00000488809 PMCHP20382 165 aa3.95□□□□□ -1.78
PTCH1-211ENST00000488809 CTRLP40313 264 aa3.95□□□□□ -1.78
PTCH1-211ENST00000488809 GNG4P50150 75 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms