RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 KCNRGQ8N5I3 272 aa11.97□□□□□ -0.49
GGPS1-206ENST00000488594 GAGE12HA6NDE8 117 aa11.96□□□□□ -0.49
GGPS1-206ENST00000488594 F2Z2F3 143 aa11.96□□□□□ -0.49
GGPS1-206ENST00000488594 TRGC1P0CF51 173 aa11.96□□□□□ -0.49
GGPS1-206ENST00000488594 OR2D3Q8NGH3 330 aa11.96□□□□□ -0.49
GGPS1-206ENST00000488594 TNXBP22105 4242 aa11.95□□□□□ -0.5
GGPS1-206ENST00000488594 A0A0J9YXV3 536 aa11.95□□□□□ -0.5
GGPS1-206ENST00000488594 XKRY2A2RUG3 117 aa11.95□□□□□ -0.5
GGPS1-206ENST00000488594 IGKV2-24A0A0C4DH68 120 aa11.94□□□□□ -0.5
GGPS1-206ENST00000488594 STPG4Q8N801 248 aa11.94□□□□□ -0.5
GGPS1-206ENST00000488594 PRSS3P2Q8NHM4 247 aa11.94□□□□□ -0.5
GGPS1-206ENST00000488594 H2AFB1P0C5Y9 115 aa11.93□□□□□ -0.5
GGPS1-206ENST00000488594 HIGD2BQ4VC39 106 aa11.93□□□□□ -0.5
GGPS1-206ENST00000488594 C11orf52Q96A22 123 aa11.93□□□□□ -0.5
GGPS1-206ENST00000488594 LINC00474Q9P2X8 69 aa11.93□□□□□ -0.5
GGPS1-206ENST00000488594 PKIGQ9Y2B9 76 aa11.93□□□□□ -0.5
GGPS1-206ENST00000488594 GVQW2A0A096LPI5 108 aaPredicted RBP11.92□□□□□ -0.5
GGPS1-206ENST00000488594 C19orf71A6NCJ1 209 aa11.92□□□□□ -0.5
GGPS1-206ENST00000488594 ZNF345Q14585 488 aa11.92□□□□□ -0.5
GGPS1-206ENST00000488594 CENPWQ5EE01 88 aa11.92□□□□□ -0.5
GGPS1-206ENST00000488594 REG3GQ6UW15 175 aa11.92□□□□□ -0.5
GGPS1-206ENST00000488594 SPINK6Q6UWN8 80 aa11.92□□□□□ -0.5
GGPS1-206ENST00000488594 SMIM12Q96EX1 92 aa11.92□□□□□ -0.5
GGPS1-206ENST00000488594 IGKV3OR2-268A0A0C4DH90 116 aa11.92□□□□□ -0.5
GGPS1-206ENST00000488594 CHCHD10Q8WYQ3 142 aaPredicted RBP11.92□□□□□ -0.5
GGPS1-206ENST00000488594 MANBALQ9NQG1 85 aa11.92□□□□□ -0.5
GGPS1-206ENST00000488594 AMMECR1LQ6DCA0 310 aa11.91□□□□□ -0.5
GGPS1-206ENST00000488594 LYPD6BQ8NI32 183 aa11.91□□□□□ -0.5
GGPS1-206ENST00000488594 IFNA1P01562 189 aa11.9□□□□□ -0.5
GGPS1-206ENST00000488594 NTF3P20783 257 aa11.9□□□□□ -0.5
GGPS1-206ENST00000488594 KRTAP10-8P60410 259 aa11.9□□□□□ -0.5
GGPS1-206ENST00000488594 A0A096LNI7 61 aa11.89□□□□□ -0.51
GGPS1-206ENST00000488594 H7C423 109 aa11.89□□□□□ -0.51
GGPS1-206ENST00000488594 GNG4P50150 75 aa11.89□□□□□ -0.51
GGPS1-206ENST00000488594 LYZL1Q6UWQ5 148 aa11.89□□□□□ -0.51
GGPS1-206ENST00000488594 C9orf62Q8N4C0 152 aa11.89□□□□□ -0.51
GGPS1-206ENST00000488594 GNG13Q9P2W3 67 aa11.89□□□□□ -0.51
GGPS1-206ENST00000488594 NCR2O95944 276 aa11.88□□□□□ -0.51
GGPS1-206ENST00000488594 CCL20P78556 96 aa11.88□□□□□ -0.51
GGPS1-206ENST00000488594 BIN3Q9NQY0 253 aa11.88□□□□□ -0.51
GGPS1-206ENST00000488594 EIF5AP63241 154 aaKnown RBP11.87□□□□□ -0.51
GGPS1-206ENST00000488594 ODF1Q14990 250 aa11.87□□□□□ -0.51
GGPS1-206ENST00000488594 CTRLP40313 264 aa11.86□□□□□ -0.51
GGPS1-206ENST00000488594 RNASEKQ6P5S7 137 aaKnown RBP11.86□□□□□ -0.51
GGPS1-206ENST00000488594 KANTRA0A1W2PQU2 76 aa11.85□□□□□ -0.51
GGPS1-206ENST00000488594 SMLR1H3BR10 107 aa11.85□□□□□ -0.51
GGPS1-206ENST00000488594 BCL2L11O43521 198 aa11.85□□□□□ -0.51
GGPS1-206ENST00000488594 FOXI1Q12951 378 aa11.85□□□□□ -0.51
GGPS1-206ENST00000488594 TWIST1Q15672 202 aa11.85□□□□□ -0.51
GGPS1-206ENST00000488594 Q6ZRP5 223 aa11.85□□□□□ -0.51
GGPS1-206ENST00000488594 GATD1Q8NB37 220 aa11.85□□□□□ -0.51
GGPS1-206ENST00000488594 CNFNQ9BYD5 112 aa11.85□□□□□ -0.51
GGPS1-206ENST00000488594 TRAV1-1A0A0B4J248 108 aa11.84□□□□□ -0.51
GGPS1-206ENST00000488594 RAB19A4D1S5 217 aa11.84□□□□□ -0.51
GGPS1-206ENST00000488594 APCSP02743 223 aa11.84□□□□□ -0.51
GGPS1-206ENST00000488594 FGF6P10767 208 aa11.84□□□□□ -0.51
GGPS1-206ENST00000488594 ZNF25P17030 456 aaPredicted RBP11.84□□□□□ -0.51
GGPS1-206ENST00000488594 SRSF9Q13242 221 aaKnown RBP eCLIP11.84□□□□□ -0.51
GGPS1-206ENST00000488594 Q6ZNX1 250 aa11.84□□□□□ -0.51
GGPS1-206ENST00000488594 BATF3Q9NR55 127 aa11.84□□□□□ -0.51
GGPS1-206ENST00000488594 HMSDA8MTL9 139 aa11.83□□□□□ -0.52
GGPS1-206ENST00000488594 PDE6DO43924 150 aa11.83□□□□□ -0.52
GGPS1-206ENST00000488594 OR5A1Q8NGJ0 315 aa11.83□□□□□ -0.52
GGPS1-206ENST00000488594 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.82□□□□□ -0.52
GGPS1-206ENST00000488594 IGHV1-58A0A0C4DH39 117 aa11.82□□□□□ -0.52
GGPS1-206ENST00000488594 IGKV2-29A2NJV5 120 aaPredicted RBP11.82□□□□□ -0.52
GGPS1-206ENST00000488594 TEX46H3BTG2 121 aa11.82□□□□□ -0.52
GGPS1-206ENST00000488594 CARD19Q96LW7 228 aa11.82□□□□□ -0.52
GGPS1-206ENST00000488594 TRAV26-2A0A0B4J265 109 aa11.81□□□□□ -0.52
GGPS1-206ENST00000488594 XCL1P47992 114 aa11.81□□□□□ -0.52
GGPS1-206ENST00000488594 MEF2BQ02080 365 aaPredicted RBP11.81□□□□□ -0.52
GGPS1-206ENST00000488594 TEX261Q6UWH6 196 aa11.81□□□□□ -0.52
GGPS1-206ENST00000488594 BTF3L4Q96K17 158 aa11.81□□□□□ -0.52
GGPS1-206ENST00000488594 TRBV20OR9-2A0A075B6H5 130 aa11.8□□□□□ -0.52
GGPS1-206ENST00000488594 SMIM15Q7Z3B0 74 aa11.8□□□□□ -0.52
GGPS1-206ENST00000488594 TMEM101Q96IK0 257 aa11.8□□□□□ -0.52
GGPS1-206ENST00000488594 NUDT10Q8NFP7 164 aa11.79□□□□□ -0.52
GGPS1-206ENST00000488594 RPL39LQ96EH5 51 aaKnown RBP11.79□□□□□ -0.52
GGPS1-206ENST00000488594 NUDT11Q96G61 164 aa11.79□□□□□ -0.52
GGPS1-206ENST00000488594 MED9Q9NWA0 146 aa11.79□□□□□ -0.52
GGPS1-206ENST00000488594 LINC00959A0A1B0GUT2 108 aa11.79□□□□□ -0.52
GGPS1-206ENST00000488594 SDHAF1A6NFY7 115 aa11.79□□□□□ -0.52
GGPS1-206ENST00000488594 CCL25O15444 150 aa11.79□□□□□ -0.52
GGPS1-206ENST00000488594 RGS21Q2M5E4 152 aa11.79□□□□□ -0.52
GGPS1-206ENST00000488594 RPP21Q9H633 154 aaKnown RBP11.79□□□□□ -0.52
GGPS1-206ENST00000488594 ZNF561-AS1K7EIQ3 104 aa11.78□□□□□ -0.52
GGPS1-206ENST00000488594 GAS8-AS1O95177 125 aa11.78□□□□□ -0.52
GGPS1-206ENST00000488594 SYCNQ0VAF6 134 aa11.78□□□□□ -0.52
GGPS1-206ENST00000488594 LINC00526Q96FQ7 95 aa11.78□□□□□ -0.52
GGPS1-206ENST00000488594 I3L3M4 83 aa11.77□□□□□ -0.53
GGPS1-206ENST00000488594 EIF5AL1Q6IS14 154 aaKnown RBP11.77□□□□□ -0.53
GGPS1-206ENST00000488594 FAM210AQ96ND0 272 aa11.77□□□□□ -0.53
GGPS1-206ENST00000488594 PMCHP20382 165 aa11.76□□□□□ -0.53
GGPS1-206ENST00000488594 PTTG1IPP53801 180 aa11.76□□□□□ -0.53
GGPS1-206ENST00000488594 SS18Q15532 418 aa11.76□□□□□ -0.53
GGPS1-206ENST00000488594 LCE2DQ5TA82 110 aaPredicted RBP11.76□□□□□ -0.53
GGPS1-206ENST00000488594 FAM231BA6NCW3 169 aa11.75□□□□□ -0.53
GGPS1-206ENST00000488594 CD164L2Q6UWJ8 174 aa11.75□□□□□ -0.53
GGPS1-206ENST00000488594 ISOC2Q96AB3 205 aa11.75□□□□□ -0.53
GGPS1-206ENST00000488594 TRBV6-5A0A0K0K1A5 114 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms