RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 FAT2Q9NYQ8 4349 aa10.08□□□□□ -0.8
CXCL12-207ENST00000488591 C16orf90A8MZG2 172 aa10.07□□□□□ -0.8
CXCL12-207ENST00000488591 I3L3M4 83 aa10.07□□□□□ -0.8
CXCL12-207ENST00000488591 NCR2O95944 276 aa10.07□□□□□ -0.8
CXCL12-207ENST00000488591 CRPP02741 224 aa10.07□□□□□ -0.8
CXCL12-207ENST00000488591 FAM104BQ5XKR9 115 aa10.07□□□□□ -0.8
CXCL12-207ENST00000488591 RBX1P62877 108 aa10.06□□□□□ -0.8
CXCL12-207ENST00000488591 ATP5L2Q7Z4Y8 100 aa10.06□□□□□ -0.8
CXCL12-207ENST00000488591 Q8N976 141 aa10.06□□□□□ -0.8
CXCL12-207ENST00000488591 DEFB104AQ8WTQ1 72 aa10.06□□□□□ -0.8
CXCL12-207ENST00000488591 PGPEP1Q9NXJ5 209 aa10.06□□□□□ -0.8
CXCL12-207ENST00000488591 IGKV2D-24A0A075B6R9 120 aa10.05□□□□□ -0.8
CXCL12-207ENST00000488591 LINC00862A6NCI5 91 aa10.05□□□□□ -0.8
CXCL12-207ENST00000488591 GAS8-AS1O95177 125 aa10.05□□□□□ -0.8
CXCL12-207ENST00000488591 APCSP02743 223 aa10.05□□□□□ -0.8
CXCL12-207ENST00000488591 SEC11CQ9BY50 192 aa10.05□□□□□ -0.8
CXCL12-207ENST00000488591 PKD1P98161 4303 aa10.04□□□□□ -0.8
CXCL12-207ENST00000488591 A0A1B0GUV1 79 aa10.04□□□□□ -0.8
CXCL12-207ENST00000488591 A0A1B0GXF2 115 aa10.04□□□□□ -0.8
CXCL12-207ENST00000488591 SMKR1H3BMG3 65 aa10.04□□□□□ -0.8
CXCL12-207ENST00000488591 ADCYAP1P18509 176 aa10.04□□□□□ -0.8
CXCL12-207ENST00000488591 CKS2P33552 79 aa10.04□□□□□ -0.8
CXCL12-207ENST00000488591 RPS10P46783 165 aaKnown RBP10.04□□□□□ -0.8
CXCL12-207ENST00000488591 MRPL51Q4U2R6 128 aaKnown RBP10.04□□□□□ -0.8
CXCL12-207ENST00000488591 TMEM70Q9BUB7 260 aa10.04□□□□□ -0.8
CXCL12-207ENST00000488591 C1orf43Q9BWL3 253 aa10.04□□□□□ -0.8
CXCL12-207ENST00000488591 LRCOL1A6NCL2 159 aa10.03□□□□□ -0.8
CXCL12-207ENST00000488591 H7C423 109 aa10.03□□□□□ -0.8
CXCL12-207ENST00000488591 VCYO14598 125 aa10.03□□□□□ -0.8
CXCL12-207ENST00000488591 KRTAP10-2P60368 255 aa10.03□□□□□ -0.8
CXCL12-207ENST00000488591 MIAQ16674 131 aa10.03□□□□□ -0.8
CXCL12-207ENST00000488591 CDPF1Q6NVV7 123 aa10.03□□□□□ -0.8
CXCL12-207ENST00000488591 ENHOQ6UWT2 76 aa10.03□□□□□ -0.8
CXCL12-207ENST00000488591 CTDSP1Q9GZU7 261 aa10.03□□□□□ -0.8
CXCL12-207ENST00000488591 TRBV27A0A0K0K1C4 114 aa10.02□□□□□ -0.81
CXCL12-207ENST00000488591 POLR2KP53803 58 aaKnown RBP10.02□□□□□ -0.81
CXCL12-207ENST00000488591 SUMO2P61956 95 aaKnown RBP10.02□□□□□ -0.81
CXCL12-207ENST00000488591 AMMECR1LQ6DCA0 310 aa10.02□□□□□ -0.81
CXCL12-207ENST00000488591 LINC00269Q8N2A0 174 aa10.02□□□□□ -0.81
CXCL12-207ENST00000488591 BTF3L4Q96K17 158 aa10.02□□□□□ -0.81
CXCL12-207ENST00000488591 IMMP2LQ96T52 175 aa10.02□□□□□ -0.81
CXCL12-207ENST00000488591 PPBPP02775 128 aa10.01□□□□□ -0.81
CXCL12-207ENST00000488591 NRACQ8N912 160 aa10.01□□□□□ -0.81
CXCL12-207ENST00000488591 C20orf78Q9BR46 151 aa10.01□□□□□ -0.81
CXCL12-207ENST00000488591 PRR34Q9NV39 138 aa10.01□□□□□ -0.81
CXCL12-207ENST00000488591 TSHBP01222 138 aa10□□□□□ -0.81
CXCL12-207ENST00000488591 FCER1GP30273 86 aa10□□□□□ -0.81
CXCL12-207ENST00000488591 REG3AQ06141 175 aa10□□□□□ -0.81
CXCL12-207ENST00000488591 RNASEKQ6P5S7 137 aaKnown RBP10□□□□□ -0.81
CXCL12-207ENST00000488591 Q8N814 137 aa10□□□□□ -0.81
CXCL12-207ENST00000488591 C20orf203Q8NBC4 194 aa10□□□□□ -0.81
CXCL12-207ENST00000488591 KIR2DL4Q99706 377 aa10□□□□□ -0.81
CXCL12-207ENST00000488591 TMEM242Q9NWH2 141 aa10□□□□□ -0.81
CXCL12-207ENST00000488591 IGLV4-60A0A075B6I1 120 aa9.99□□□□□ -0.81
CXCL12-207ENST00000488591 TRBV24-1A0A075B6N3 115 aa9.99□□□□□ -0.81
CXCL12-207ENST00000488591 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.99□□□□□ -0.81
CXCL12-207ENST00000488591 IGKV2-29A2NJV5 120 aaPredicted RBP9.99□□□□□ -0.81
CXCL12-207ENST00000488591 D6R8Y8 96 aa9.99□□□□□ -0.81
CXCL12-207ENST00000488591 CLPSL2Q6UWE3 100 aa9.99□□□□□ -0.81
CXCL12-207ENST00000488591 NTN5Q8WTR8 489 aaPredicted RBP9.99□□□□□ -0.81
CXCL12-207ENST00000488591 BAALCQ8WXS3 180 aa9.99□□□□□ -0.81
CXCL12-207ENST00000488591 TRAV8-4A0A0B4J246 113 aa9.98□□□□□ -0.81
CXCL12-207ENST00000488591 TCAPO15273 167 aa9.98□□□□□ -0.81
CXCL12-207ENST00000488591 TNFRSF6BO95407 300 aa9.98□□□□□ -0.81
CXCL12-207ENST00000488591 FGF6P10767 208 aa9.98□□□□□ -0.81
CXCL12-207ENST00000488591 S100PP25815 95 aa9.98□□□□□ -0.81
CXCL12-207ENST00000488591 C10orf91Q5T1B1 145 aa9.98□□□□□ -0.81
CXCL12-207ENST00000488591 ORMDL3Q8N138 153 aa9.98□□□□□ -0.81
CXCL12-207ENST00000488591 MAPKAPK5-AS1Q8N8E1 139 aa9.98□□□□□ -0.81
CXCL12-207ENST00000488591 TMEM101Q96IK0 257 aa9.98□□□□□ -0.81
CXCL12-207ENST00000488591 PKHD1P08F94 4074 aa9.97□□□□□ -0.81
CXCL12-207ENST00000488591 IGLV5-52A0A0A0MRZ9 124 aa9.97□□□□□ -0.81
CXCL12-207ENST00000488591 PHOX2AO14813 284 aa9.97□□□□□ -0.81
CXCL12-207ENST00000488591 LECT2O14960 151 aa9.97□□□□□ -0.81
CXCL12-207ENST00000488591 ESDP10768 282 aa9.97□□□□□ -0.81
CXCL12-207ENST00000488591 ZNF25P17030 456 aaPredicted RBP9.97□□□□□ -0.81
CXCL12-207ENST00000488591 SMAGPQ0VAQ4 97 aa9.97□□□□□ -0.81
CXCL12-207ENST00000488591 TMEM136Q6ZRR5 245 aa9.97□□□□□ -0.81
CXCL12-207ENST00000488591 CARHSP1Q9Y2V2 147 aaKnown RBP9.97□□□□□ -0.81
CXCL12-207ENST00000488591 TRAV9-1A0A075B6T8 112 aa9.96□□□□□ -0.82
CXCL12-207ENST00000488591 C7orf77A4D0Y5 90 aa9.96□□□□□ -0.82
CXCL12-207ENST00000488591 FUSP35637 526 aaKnown RBP eCLIP9.96□□□□□ -0.82
CXCL12-207ENST00000488591 RPL32P62910 135 aaKnown RBP9.96□□□□□ -0.82
CXCL12-207ENST00000488591 HLA-DQA1P01909 254 aa9.95□□□□□ -0.82
CXCL12-207ENST00000488591 WFDC2Q14508 124 aa9.95□□□□□ -0.82
CXCL12-207ENST00000488591 RHEBQ15382 184 aa9.95□□□□□ -0.82
CXCL12-207ENST00000488591 NDUFA5Q16718 116 aa9.95□□□□□ -0.82
CXCL12-207ENST00000488591 C14orf177Q52M58 125 aa9.95□□□□□ -0.82
CXCL12-207ENST00000488591 LCE2AQ5TA79 106 aaPredicted RBP9.95□□□□□ -0.82
CXCL12-207ENST00000488591 CLRN3Q8NCR9 226 aa9.95□□□□□ -0.82
CXCL12-207ENST00000488591 TMEM18Q96B42 140 aa9.95□□□□□ -0.82
CXCL12-207ENST00000488591 PRELID3AQ96N28 172 aa9.95□□□□□ -0.82
CXCL12-207ENST00000488591 IGLV10-54A0A075B6I4 117 aa9.94□□□□□ -0.82
CXCL12-207ENST00000488591 NPYP01303 97 aa9.94□□□□□ -0.82
CXCL12-207ENST00000488591 GCSHP23434 173 aa9.94□□□□□ -0.82
CXCL12-207ENST00000488591 DGAT2L7PQ6IED9 249 aa9.94□□□□□ -0.82
CXCL12-207ENST00000488591 OR5A1Q8NGJ0 315 aa9.94□□□□□ -0.82
CXCL12-207ENST00000488591 SMIM2Q9BVW6 85 aa9.94□□□□□ -0.82
CXCL12-207ENST00000488591 RPS10P5Q9NQ39 176 aa9.94□□□□□ -0.82
CXCL12-207ENST00000488591 LAMTOR2Q9Y2Q5 125 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms