RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 TRAV8-4A0A0B4J246 113 aa15.01□□□□□ -0.01
CUL4A-209ENST00000488558 COTL1Q14019 142 aa15.01□□□□□ -0.01
CUL4A-209ENST00000488558 CT83Q5H943 113 aa15.01□□□□□ -0.01
CUL4A-209ENST00000488558 GATCO43716 136 aaKnown RBP15□□□□□ -0.01
CUL4A-209ENST00000488558 DGAT2L7PQ6IED9 249 aa15□□□□□ -0.01
CUL4A-209ENST00000488558 SMIM15Q7Z3B0 74 aa15□□□□□ -0.01
CUL4A-209ENST00000488558 GATD1Q8NB37 220 aa15□□□□□ -0.01
CUL4A-209ENST00000488558 FLG2Q5D862 2391 aaPredicted RBP14.99□□□□□ -0.01
CUL4A-209ENST00000488558 A8MWL6 223 aa14.99□□□□□ -0.01
CUL4A-209ENST00000488558 PRSS1P07477 247 aa14.99□□□□□ -0.01
CUL4A-209ENST00000488558 AMTP48728 403 aa14.99□□□□□ -0.01
CUL4A-209ENST00000488558 UBE2L6O14933 153 aa14.98□□□□□ -0.01
CUL4A-209ENST00000488558 TEX261Q6UWH6 196 aa14.98□□□□□ -0.01
CUL4A-209ENST00000488558 IGLV4-60A0A075B6I1 120 aa14.97□□□□□ -0.01
CUL4A-209ENST00000488558 FOXA3P55318 350 aaPredicted RBP14.97□□□□□ -0.01
CUL4A-209ENST00000488558 CLRN3Q8NCR9 226 aa14.97□□□□□ -0.01
CUL4A-209ENST00000488558 CIRBP-AS1Q8TBR5 109 aa14.97□□□□□ -0.01
CUL4A-209ENST00000488558 TRAV26-2A0A0B4J265 109 aa14.96□□□□□ -0.01
CUL4A-209ENST00000488558 NCR2O95944 276 aa14.96□□□□□ -0.01
CUL4A-209ENST00000488558 IGLV10-54A0A075B6I4 117 aa14.95□□□□□ -0.02
CUL4A-209ENST00000488558 C9orf163Q8N9P6 203 aa14.95□□□□□ -0.02
CUL4A-209ENST00000488558 FAM210AQ96ND0 272 aa14.95□□□□□ -0.02
CUL4A-209ENST00000488558 SMIM7Q9BQ49 75 aa14.95□□□□□ -0.02
CUL4A-209ENST00000488558 EIF5A2Q9GZV4 153 aaKnown RBP14.95□□□□□ -0.02
CUL4A-209ENST00000488558 GFRA4Q9GZZ7 299 aa14.95□□□□□ -0.02
CUL4A-209ENST00000488558 CEBPGP53567 150 aa14.94□□□□□ -0.02
CUL4A-209ENST00000488558 LINC01551Q86U37 167 aa14.93□□□□□ -0.02
CUL4A-209ENST00000488558 RPL39LQ96EH5 51 aaKnown RBP14.93□□□□□ -0.02
CUL4A-209ENST00000488558 DEFB104AQ8WTQ1 72 aa14.92□□□□□ -0.02
CUL4A-209ENST00000488558 BORCS7Q96B45 105 aa14.92□□□□□ -0.02
CUL4A-209ENST00000488558 FAM231BA6NCW3 169 aa14.91□□□□□ -0.02
CUL4A-209ENST00000488558 H7C423 109 aa14.91□□□□□ -0.02
CUL4A-209ENST00000488558 CNBPP62633 177 aaKnown RBP14.91□□□□□ -0.02
CUL4A-209ENST00000488558 TSKUQ8WUA8 353 aa14.91□□□□□ -0.02
CUL4A-209ENST00000488558 TRBV6-5A0A0K0K1A5 114 aa14.9□□□□□ -0.02
CUL4A-209ENST00000488558 SDHAF1A6NFY7 115 aa14.9□□□□□ -0.02
CUL4A-209ENST00000488558 ZNF727A8MUV8 499 aa14.9□□□□□ -0.02
CUL4A-209ENST00000488558 OSTCQ9NRP0 149 aa14.9□□□□□ -0.02
CUL4A-209ENST00000488558 APCSP02743 223 aa14.89□□□□□ -0.03
CUL4A-209ENST00000488558 SRP19P09132 144 aaKnown RBP14.89□□□□□ -0.03
CUL4A-209ENST00000488558 KRTAP10-4P60372 401 aaPredicted RBP14.89□□□□□ -0.03
CUL4A-209ENST00000488558 A0A1B0GUT8 65 aa14.88□□□□□ -0.03
CUL4A-209ENST00000488558 HIGD1CA8MV81 97 aa14.88□□□□□ -0.03
CUL4A-209ENST00000488558 TMEM191AQ9H0A3 160 aa14.88□□□□□ -0.03
CUL4A-209ENST00000488558 hDV102S1A0JD36 115 aa14.87□□□□□ -0.03
CUL4A-209ENST00000488558 AMMECR1LQ6DCA0 310 aa14.87□□□□□ -0.03
CUL4A-209ENST00000488558 I3L3M4 83 aa14.86□□□□□ -0.03
CUL4A-209ENST00000488558 ZNF25P17030 456 aaPredicted RBP14.85□□□□□ -0.03
CUL4A-209ENST00000488558 SDIM1Q6ZPB5 146 aa14.85□□□□□ -0.03
CUL4A-209ENST00000488558 AP5S1Q9NUS5 200 aa14.85□□□□□ -0.03
CUL4A-209ENST00000488558 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.84□□□□□ -0.03
CUL4A-209ENST00000488558 KRTAP29-1A8MX34 341 aaPredicted RBP14.84□□□□□ -0.03
CUL4A-209ENST00000488558 FGF6P10767 208 aa14.84□□□□□ -0.03
CUL4A-209ENST00000488558 FAM74A3Q4VXF1 159 aa14.84□□□□□ -0.03
CUL4A-209ENST00000488558 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.83□□□□□ -0.04
CUL4A-209ENST00000488558 IGKV2-29A2NJV5 120 aaPredicted RBP14.83□□□□□ -0.04
CUL4A-209ENST00000488558 J3QL48 77 aa14.83□□□□□ -0.04
CUL4A-209ENST00000488558 MRAP2Q96G30 205 aa14.83□□□□□ -0.04
CUL4A-209ENST00000488558 ST20Q9HBF5 79 aa14.83□□□□□ -0.04
CUL4A-209ENST00000488558 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.83□□□□□ -0.04
CUL4A-209ENST00000488558 V9GYV3 84 aa14.83□□□□□ -0.04
CUL4A-209ENST00000488558 A0A1B0GVG6 124 aa14.82□□□□□ -0.04
CUL4A-209ENST00000488558 GAGE12HA6NDE8 117 aa14.82□□□□□ -0.04
CUL4A-209ENST00000488558 PMCHP20382 165 aa14.82□□□□□ -0.04
CUL4A-209ENST00000488558 CIRBPQ14011 172 aaKnown RBP14.82□□□□□ -0.04
CUL4A-209ENST00000488558 RNASEKQ6P5S7 137 aaKnown RBP14.82□□□□□ -0.04
CUL4A-209ENST00000488558 CFAP161Q6P656 301 aa14.82□□□□□ -0.04
CUL4A-209ENST00000488558 RNF185Q96GF1 192 aa14.82□□□□□ -0.04
CUL4A-209ENST00000488558 IGHV3-64A0A075B6Q5 118 aa14.81□□□□□ -0.04
CUL4A-209ENST00000488558 ESDP10768 282 aa14.81□□□□□ -0.04
CUL4A-209ENST00000488558 C15orf56Q8N910 161 aa14.81□□□□□ -0.04
CUL4A-209ENST00000488558 ISOC2Q96AB3 205 aa14.81□□□□□ -0.04
CUL4A-209ENST00000488558 GAS8-AS1O95177 125 aa14.8□□□□□ -0.04
CUL4A-209ENST00000488558 TSHBP01222 138 aa14.8□□□□□ -0.04
CUL4A-209ENST00000488558 RAB4AP20338 218 aa14.8□□□□□ -0.04
CUL4A-209ENST00000488558 TMEM241Q24JQ0 296 aa14.8□□□□□ -0.04
CUL4A-209ENST00000488558 CHCHD10Q8WYQ3 142 aaPredicted RBP14.8□□□□□ -0.04
CUL4A-209ENST00000488558 IGKV3OR2-268A0A0C4DH90 116 aa14.79□□□□□ -0.04
CUL4A-209ENST00000488558 TRBV27A0A0K0K1C4 114 aa14.79□□□□□ -0.04
CUL4A-209ENST00000488558 PANO1I0J062 215 aa14.79□□□□□ -0.04
CUL4A-209ENST00000488558 SLPIP03973 132 aa14.79□□□□□ -0.04
CUL4A-209ENST00000488558 POLR2KP53803 58 aaKnown RBP14.79□□□□□ -0.04
CUL4A-209ENST00000488558 RIGQ13278 110 aa14.79□□□□□ -0.04
CUL4A-209ENST00000488558 NUP35Q8NFH5 326 aa14.79□□□□□ -0.04
CUL4A-209ENST00000488558 OR5A1Q8NGJ0 315 aa14.79□□□□□ -0.04
CUL4A-209ENST00000488558 BTF3L4Q96K17 158 aa14.79□□□□□ -0.04
CUL4A-209ENST00000488558 RPS10P46783 165 aaKnown RBP14.78□□□□□ -0.04
CUL4A-209ENST00000488558 RPL37AP61513 92 aaKnown RBP14.78□□□□□ -0.04
CUL4A-209ENST00000488558 RPL23P62829 140 aaKnown RBP14.78□□□□□ -0.04
CUL4A-209ENST00000488558 AMN1Q8IY45 258 aa14.78□□□□□ -0.04
CUL4A-209ENST00000488558 TMEM101Q96IK0 257 aa14.78□□□□□ -0.04
CUL4A-209ENST00000488558 TMEM242Q9NWH2 141 aa14.78□□□□□ -0.04
CUL4A-209ENST00000488558 MRPL52Q86TS9 123 aaKnown RBP14.77□□□□□ -0.05
CUL4A-209ENST00000488558 NAT8Q9UHE5 227 aa14.77□□□□□ -0.05
CUL4A-209ENST00000488558 NAT8BQ9UHF3 227 aa14.77□□□□□ -0.05
CUL4A-209ENST00000488558 PPP1R17O96001 155 aa14.76□□□□□ -0.05
CUL4A-209ENST00000488558 SMDT1Q9H4I9 107 aa14.76□□□□□ -0.05
CUL4A-209ENST00000488558 GVQW2A0A096LPI5 108 aaPredicted RBP14.75□□□□□ -0.05
CUL4A-209ENST00000488558 C7orf77A4D0Y5 90 aa14.74□□□□□ -0.05
CUL4A-209ENST00000488558 FOXI1Q12951 378 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms