RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 GAGE12FP0CL80 117 aa10.16□□□□□ -0.78
COPS7B-221ENST00000488111 GAGE12GP0CL81 117 aa10.16□□□□□ -0.78
COPS7B-221ENST00000488111 GAGE12IP0CL82 117 aa10.16□□□□□ -0.78
COPS7B-221ENST00000488111 GAGE4Q13068 117 aa10.16□□□□□ -0.78
COPS7B-221ENST00000488111 FBN1P35555 2871 aaKnown RBP10.16□□□□□ -0.78
COPS7B-221ENST00000488111 SCGB1C2P0DMR2 95 aa10.15□□□□□ -0.78
COPS7B-221ENST00000488111 ATRQ13535 2644 aa10.15□□□□□ -0.78
COPS7B-221ENST00000488111 CRYGDP07320 174 aa10.15□□□□□ -0.79
COPS7B-221ENST00000488111 SLC25A29Q8N8R3 303 aa10.15□□□□□ -0.79
COPS7B-221ENST00000488111 PRO1854Q9UHT4 67 aa10.15□□□□□ -0.79
COPS7B-221ENST00000488111 IGLV4-69A0A075B6H9 119 aa10.14□□□□□ -0.79
COPS7B-221ENST00000488111 CCDC179H3BU77 68 aa10.14□□□□□ -0.79
COPS7B-221ENST00000488111 SNCGO76070 127 aa10.14□□□□□ -0.79
COPS7B-221ENST00000488111 HERVK_113P61574 105 aa10.14□□□□□ -0.79
COPS7B-221ENST00000488111 WNK1Q9H4A3 2382 aa10.14□□□□□ -0.79
COPS7B-221ENST00000488111 TENM1Q9UKZ4 2725 aa10.14□□□□□ -0.79
COPS7B-221ENST00000488111 TRAV8-2A0A0B4J237 113 aa10.14□□□□□ -0.79
COPS7B-221ENST00000488111 TRAV4A0A0B4J268 109 aa10.14□□□□□ -0.79
COPS7B-221ENST00000488111 C11orf86A6NJI1 115 aa10.14□□□□□ -0.79
COPS7B-221ENST00000488111 PAPPA-AS1Q5QFB9 102 aa10.14□□□□□ -0.79
COPS7B-221ENST00000488111 LINC01600Q96MT4 127 aa10.14□□□□□ -0.79
COPS7B-221ENST00000488111 PEMTQ9UBM1 199 aa10.14□□□□□ -0.79
COPS7B-221ENST00000488111 M0R381 172 aa10.13□□□□□ -0.79
COPS7B-221ENST00000488111 RPL39LQ96EH5 51 aaKnown RBP10.13□□□□□ -0.79
COPS7B-221ENST00000488111 MRPL53Q96EL3 112 aaKnown RBP10.13□□□□□ -0.79
COPS7B-221ENST00000488111 C9JAW5 83 aa10.12□□□□□ -0.79
COPS7B-221ENST00000488111 IFITM1P13164 125 aa10.12□□□□□ -0.79
COPS7B-221ENST00000488111 Q6ZQT7 251 aa10.12□□□□□ -0.79
COPS7B-221ENST00000488111 OVOL1O14753 267 aa10.12□□□□□ -0.79
COPS7B-221ENST00000488111 C9orf47Q6ZRZ4 202 aa10.12□□□□□ -0.79
COPS7B-221ENST00000488111 TSPEAR-AS2P59090 65 aa10.11□□□□□ -0.79
COPS7B-221ENST00000488111 C16orf92Q96LL3 132 aa10.11□□□□□ -0.79
COPS7B-221ENST00000488111 AMELXQ99217 191 aa10.11□□□□□ -0.79
COPS7B-221ENST00000488111 DPH3P1Q9H4G8 78 aa10.11□□□□□ -0.79
COPS7B-221ENST00000488111 TSHBP01222 138 aa10.11□□□□□ -0.79
COPS7B-221ENST00000488111 P0DMU3 169 aa10.11□□□□□ -0.79
COPS7B-221ENST00000488111 FAM231AP0DMU4 169 aa10.11□□□□□ -0.79
COPS7B-221ENST00000488111 FAM231CP0DMU5 169 aa10.11□□□□□ -0.79
COPS7B-221ENST00000488111 RPL32P62910 135 aaKnown RBP10.11□□□□□ -0.79
COPS7B-221ENST00000488111 HERV-K104P63124 156 aa10.11□□□□□ -0.79
COPS7B-221ENST00000488111 TTC32Q5I0X7 151 aa10.11□□□□□ -0.79
COPS7B-221ENST00000488111 DUSP14O95147 198 aaKnown RBP10.1□□□□□ -0.79
COPS7B-221ENST00000488111 IGHV3-33P01772 117 aa10.1□□□□□ -0.79
COPS7B-221ENST00000488111 PF4P02776 101 aa10.1□□□□□ -0.79
COPS7B-221ENST00000488111 ANXA2RQ3ZCQ2 193 aa10.1□□□□□ -0.79
COPS7B-221ENST00000488111 Q8N1Y9 231 aa10.1□□□□□ -0.79
COPS7B-221ENST00000488111 EIF4EBP3O60516 100 aaPredicted RBP10.1□□□□□ -0.79
COPS7B-221ENST00000488111 TRPT1Q86TN4 253 aaKnown RBP10.1□□□□□ -0.79
COPS7B-221ENST00000488111 ODF3Q96PU9 254 aa10.1□□□□□ -0.79
COPS7B-221ENST00000488111 SPANXA1Q9NS26 97 aa10.1□□□□□ -0.79
COPS7B-221ENST00000488111 RPL13AP40429 203 aaKnown RBP10.09□□□□□ -0.79
COPS7B-221ENST00000488111 PRR9Q5T870 116 aa10.09□□□□□ -0.79
COPS7B-221ENST00000488111 DYNLRB2Q8TF09 96 aa10.09□□□□□ -0.79
COPS7B-221ENST00000488111 NTN5Q8WTR8 489 aaPredicted RBP10.09□□□□□ -0.79
COPS7B-221ENST00000488111 TMEM263Q8WUH6 116 aaKnown RBP10.09□□□□□ -0.79
COPS7B-221ENST00000488111 C20orf173Q96LM9 149 aa10.09□□□□□ -0.79
COPS7B-221ENST00000488111 SPATA3Q8NHX4 192 aa10.09□□□□□ -0.79
COPS7B-221ENST00000488111 A0A0B4J2C4 111 aa10.08□□□□□ -0.8
COPS7B-221ENST00000488111 IGIPA6NJ69 53 aa10.08□□□□□ -0.8
COPS7B-221ENST00000488111 SOCS3O14543 225 aa10.08□□□□□ -0.8
COPS7B-221ENST00000488111 DEFB1P60022 68 aa10.08□□□□□ -0.8
COPS7B-221ENST00000488111 PMVKQ15126 192 aa10.08□□□□□ -0.8
COPS7B-221ENST00000488111 SMIM20Q8N5G0 67 aa10.08□□□□□ -0.8
COPS7B-221ENST00000488111 PPP1R17O96001 155 aa10.08□□□□□ -0.8
COPS7B-221ENST00000488111 DEFB114Q30KQ6 69 aa10.08□□□□□ -0.8
COPS7B-221ENST00000488111 TMEM61Q8N0U2 210 aa10.08□□□□□ -0.8
COPS7B-221ENST00000488111 C14orf178Q8N769 122 aaPredicted RBP10.08□□□□□ -0.8
COPS7B-221ENST00000488111 POM121L12Q8N7R1 296 aa10.08□□□□□ -0.8
COPS7B-221ENST00000488111 DCANP1Q8TF63 244 aa10.08□□□□□ -0.8
COPS7B-221ENST00000488111 A4D1N5 150 aa10.07□□□□□ -0.8
COPS7B-221ENST00000488111 LENEPQ9Y5L5 61 aa10.07□□□□□ -0.8
COPS7B-221ENST00000488111 TRAV8-4A0A0B4J246 113 aa10.07□□□□□ -0.8
COPS7B-221ENST00000488111 EMP1P54849 157 aa10.07□□□□□ -0.8
COPS7B-221ENST00000488111 LINC01620Q4KN68 170 aa10.07□□□□□ -0.8
COPS7B-221ENST00000488111 FAM159AQ6UWV7 190 aa10.07□□□□□ -0.8
COPS7B-221ENST00000488111 C3orf56Q8N813 242 aa10.07□□□□□ -0.8
COPS7B-221ENST00000488111 LINC00482Q8N8I6 264 aa10.07□□□□□ -0.8
COPS7B-221ENST00000488111 TMEM141Q96I45 108 aa10.07□□□□□ -0.8
COPS7B-221ENST00000488111 MED14OSP0DP75 135 aa10.06□□□□□ -0.8
COPS7B-221ENST00000488111 ATXN8Q156A1 80 aa10.06□□□□□ -0.8
COPS7B-221ENST00000488111 C15orf53Q8NAA6 179 aa10.06□□□□□ -0.8
COPS7B-221ENST00000488111 TP53TG1Q9Y2A0 90 aa10.06□□□□□ -0.8
COPS7B-221ENST00000488111 J3QQQ9 107 aa10.06□□□□□ -0.8
COPS7B-221ENST00000488111 MGPP08493 103 aa10.06□□□□□ -0.8
COPS7B-221ENST00000488111 SPXQ9BT56 116 aa10.06□□□□□ -0.8
COPS7B-221ENST00000488111 SPRY2O43597 315 aa10.05□□□□□ -0.8
COPS7B-221ENST00000488111 OR10J6PQ8NGY7 276 aa10.05□□□□□ -0.8
COPS7B-221ENST00000488111 ZNRF2Q8NHG8 242 aa10.05□□□□□ -0.8
COPS7B-221ENST00000488111 TIMM17AQ99595 171 aa10.05□□□□□ -0.8
COPS7B-221ENST00000488111 MDFICQ9P1T7 246 aa10.05□□□□□ -0.8
COPS7B-221ENST00000488111 TRRAPQ9Y4A5 3859 aa10.05□□□□□ -0.8
COPS7B-221ENST00000488111 TRBV10-2A0A0K0K1G8 114 aa10.04□□□□□ -0.8
COPS7B-221ENST00000488111 F6UB75 175 aa10.04□□□□□ -0.8
COPS7B-221ENST00000488111 K7EQG2 157 aa10.04□□□□□ -0.8
COPS7B-221ENST00000488111 MRPL23Q16540 153 aaKnown RBP10.04□□□□□ -0.8
COPS7B-221ENST00000488111 ZNF876PQ49A33 203 aa10.04□□□□□ -0.8
COPS7B-221ENST00000488111 LGALS3P17931 250 aaKnown RBP10.04□□□□□ -0.8
COPS7B-221ENST00000488111 TMEM170BQ5T4T1 132 aa10.04□□□□□ -0.8
COPS7B-221ENST00000488111 PHLDA3Q9Y5J5 127 aa10.04□□□□□ -0.8
COPS7B-221ENST00000488111 TEX49A0A1B0GTD5 131 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms