RNA–Protein interactions for RNA: ENST00000487996.5

HLA-DMB-261, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-261ENST00000487996 A0A0J9YY99 117 aa7.4□□□□□ -1.23
HLA-DMB-261ENST00000487996 LINC00614P0C842 121 aa7.4□□□□□ -1.23
HLA-DMB-261ENST00000487996 G0S2P27469 103 aa7.4□□□□□ -1.23
HLA-DMB-261ENST00000487996 UBE2D3P61077 147 aa7.4□□□□□ -1.23
HLA-DMB-261ENST00000487996 UBE2D2P62837 147 aa7.4□□□□□ -1.23
HLA-DMB-261ENST00000487996 IQCJQ1A5X6 159 aa7.4□□□□□ -1.23
HLA-DMB-261ENST00000487996 C15orf53Q8NAA6 179 aa7.4□□□□□ -1.23
HLA-DMB-261ENST00000487996 PHLDA1Q8WV24 401 aaPredicted RBP7.4□□□□□ -1.23
HLA-DMB-261ENST00000487996 VSIG2Q96IQ7 327 aa7.4□□□□□ -1.23
HLA-DMB-261ENST00000487996 CHTOPQ9Y3Y2 248 aaKnown RBP7.4□□□□□ -1.23
HLA-DMB-261ENST00000487996 FCER1GP30273 86 aa7.39□□□□□ -1.23
HLA-DMB-261ENST00000487996 IFI27P40305 119 aaPredicted RBP7.39□□□□□ -1.23
HLA-DMB-261ENST00000487996 ORMDL2Q53FV1 153 aa7.39□□□□□ -1.23
HLA-DMB-261ENST00000487996 COA6Q5JTJ3 125 aaKnown RBP7.39□□□□□ -1.23
HLA-DMB-261ENST00000487996 RNASEKQ6P5S7 137 aaKnown RBP7.39□□□□□ -1.23
HLA-DMB-261ENST00000487996 LINC00694P0DN24 101 aa7.38□□□□□ -1.23
HLA-DMB-261ENST00000487996 NDUFA6P56556 154 aa7.38□□□□□ -1.23
HLA-DMB-261ENST00000487996 MAJINQ3KP22 176 aa7.38□□□□□ -1.23
HLA-DMB-261ENST00000487996 NIT1Q86X76 327 aa7.38□□□□□ -1.23
HLA-DMB-261ENST00000487996 ATP6V0E2Q8NHE4 81 aa7.38□□□□□ -1.23
HLA-DMB-261ENST00000487996 IGLV2-18A0A075B6J9 118 aa7.38□□□□□ -1.23
HLA-DMB-261ENST00000487996 LOC100131303A0A0U1RQF7 123 aa7.38□□□□□ -1.23
HLA-DMB-261ENST00000487996 NUPR2A6NF83 97 aa7.38□□□□□ -1.23
HLA-DMB-261ENST00000487996 LINC01546A6NGU7 62 aa7.38□□□□□ -1.23
HLA-DMB-261ENST00000487996 HSBP1O75506 76 aa7.38□□□□□ -1.23
HLA-DMB-261ENST00000487996 LAGE3Q14657 143 aa7.38□□□□□ -1.23
HLA-DMB-261ENST00000487996 NEGR1Q7Z3B1 354 aa7.38□□□□□ -1.23
HLA-DMB-261ENST00000487996 Q9UF83 564 aa7.38□□□□□ -1.23
HLA-DMB-261ENST00000487996 LINC01549A6NIU2 74 aa7.37□□□□□ -1.23
HLA-DMB-261ENST00000487996 SERF1AO75920 110 aa7.37□□□□□ -1.23
HLA-DMB-261ENST00000487996 GTSF1LQ9H1H1 148 aa7.37□□□□□ -1.23
HLA-DMB-261ENST00000487996 KLK5Q9Y337 293 aaPredicted RBP7.37□□□□□ -1.23
HLA-DMB-261ENST00000487996 A0A096LPF7 62 aa7.36□□□□□ -1.23
HLA-DMB-261ENST00000487996 ESDP10768 282 aa7.36□□□□□ -1.23
HLA-DMB-261ENST00000487996 TMEM18Q96B42 140 aa7.36□□□□□ -1.23
HLA-DMB-261ENST00000487996 TRBV25-1A0A075B6N4 114 aa7.35□□□□□ -1.23
HLA-DMB-261ENST00000487996 LOC100996750A0A140TA64 210 aa7.35□□□□□ -1.23
HLA-DMB-261ENST00000487996 NUDT3O95989 172 aa7.35□□□□□ -1.23
HLA-DMB-261ENST00000487996 TSHBP01222 138 aa7.35□□□□□ -1.23
HLA-DMB-261ENST00000487996 TCTAP57738 103 aa7.35□□□□□ -1.23
HLA-DMB-261ENST00000487996 CEMP1Q6PRD7 247 aaPredicted RBP7.35□□□□□ -1.23
HLA-DMB-261ENST00000487996 KRTAP4-6Q9BYQ5 205 aa7.35□□□□□ -1.23
HLA-DMB-261ENST00000487996 IGHV1-24A0A0C4DH33 117 aa7.35□□□□□ -1.23
HLA-DMB-261ENST00000487996 IGHV3-38A0A0C4DH36 116 aa7.35□□□□□ -1.23
HLA-DMB-261ENST00000487996 IGLL5B9A064 214 aa7.35□□□□□ -1.23
HLA-DMB-261ENST00000487996 AMTP48728 403 aa7.35□□□□□ -1.23
HLA-DMB-261ENST00000487996 TIRAPP58753 221 aa7.35□□□□□ -1.23
HLA-DMB-261ENST00000487996 SMAGPQ0VAQ4 97 aa7.35□□□□□ -1.23
HLA-DMB-261ENST00000487996 KMT2CQ8NEZ4 4911 aaKnown RBP7.34□□□□□ -1.23
HLA-DMB-261ENST00000487996 TRBV6-8A0A0A6YYG3 113 aa7.34□□□□□ -1.23
HLA-DMB-261ENST00000487996 HBDP02042 147 aa7.34□□□□□ -1.23
HLA-DMB-261ENST00000487996 SMIM6P0DI80 62 aa7.34□□□□□ -1.23
HLA-DMB-261ENST00000487996 S100A2P29034 98 aa7.34□□□□□ -1.23
HLA-DMB-261ENST00000487996 URB1-AS1Q96HZ7 61 aa7.34□□□□□ -1.23
HLA-DMB-261ENST00000487996 WWC2-AS2Q96NR7 200 aa7.34□□□□□ -1.23
HLA-DMB-261ENST00000487996 AKR1D1P51857 326 aa7.33□□□□□ -1.24
HLA-DMB-261ENST00000487996 LINC00310P59036 64 aa7.33□□□□□ -1.24
HLA-DMB-261ENST00000487996 PKIAP61925 76 aa7.33□□□□□ -1.24
HLA-DMB-261ENST00000487996 TMEM243Q9BU79 118 aa7.33□□□□□ -1.24
HLA-DMB-261ENST00000487996 CYSLTR1Q9Y271 337 aa7.33□□□□□ -1.24
HLA-DMB-261ENST00000487996 C5orf52A6NGY3 159 aa7.32□□□□□ -1.24
HLA-DMB-261ENST00000487996 H7C423 109 aa7.32□□□□□ -1.24
HLA-DMB-261ENST00000487996 UBE2L6O14933 153 aa7.32□□□□□ -1.24
HLA-DMB-261ENST00000487996 SNRPEP62304 92 aaKnown RBP7.32□□□□□ -1.24
HLA-DMB-261ENST00000487996 C20orf203Q8NBC4 194 aa7.32□□□□□ -1.24
HLA-DMB-261ENST00000487996 PACRGQ96M98 296 aaPredicted RBP7.32□□□□□ -1.24
HLA-DMB-261ENST00000487996 TNP2Q05952 138 aa7.32□□□□□ -1.24
HLA-DMB-261ENST00000487996 LELP1Q5T871 98 aa7.32□□□□□ -1.24
HLA-DMB-261ENST00000487996 C2orf66Q6UXQ4 117 aa7.32□□□□□ -1.24
HLA-DMB-261ENST00000487996 MUC7Q8TAX7 377 aa7.32□□□□□ -1.24
HLA-DMB-261ENST00000487996 CCL18P55774 89 aa7.31□□□□□ -1.24
HLA-DMB-261ENST00000487996 LYPD5Q6UWN5 251 aa7.31□□□□□ -1.24
HLA-DMB-261ENST00000487996 NTM-AS1Q6ZSK4 140 aa7.31□□□□□ -1.24
HLA-DMB-261ENST00000487996 HIST3H2BBQ8N257 126 aa7.31□□□□□ -1.24
HLA-DMB-261ENST00000487996 TOMM6Q96B49 74 aa7.31□□□□□ -1.24
HLA-DMB-261ENST00000487996 CHCHD7Q9BUK0 85 aa7.31□□□□□ -1.24
HLA-DMB-261ENST00000487996 HSPB8Q9UJY1 196 aa7.31□□□□□ -1.24
HLA-DMB-261ENST00000487996 RYR3Q15413 4870 aa7.3□□□□□ -1.24
HLA-DMB-261ENST00000487996 TRAV8-6A0A0B4J262 113 aa7.3□□□□□ -1.24
HLA-DMB-261ENST00000487996 NUPR1O60356 82 aa7.3□□□□□ -1.24
HLA-DMB-261ENST00000487996 ATP5LO75964 103 aa7.3□□□□□ -1.24
HLA-DMB-261ENST00000487996 LEPROTL1O95214 131 aa7.3□□□□□ -1.24
HLA-DMB-261ENST00000487996 PMCHL1Q16048 86 aa7.3□□□□□ -1.24
HLA-DMB-261ENST00000487996 PDZD11Q5EBL8 140 aa7.3□□□□□ -1.24
HLA-DMB-261ENST00000487996 FAM19A2Q8N3H0 131 aa7.3□□□□□ -1.24
HLA-DMB-261ENST00000487996 DEFB104AQ8WTQ1 72 aa7.3□□□□□ -1.24
HLA-DMB-261ENST00000487996 CHCHD5Q9BSY4 110 aa7.3□□□□□ -1.24
HLA-DMB-261ENST00000487996 NPSP0C0P6 89 aa7.3□□□□□ -1.24
HLA-DMB-261ENST00000487996 ZNF25P17030 456 aaPredicted RBP7.3□□□□□ -1.24
HLA-DMB-261ENST00000487996 PAPPA-AS1Q5QFB9 102 aa7.3□□□□□ -1.24
HLA-DMB-261ENST00000487996 SPANXA1Q9NS26 97 aa7.3□□□□□ -1.24
HLA-DMB-261ENST00000487996 AMMECR1LQ6DCA0 310 aa7.29□□□□□ -1.24
HLA-DMB-261ENST00000487996 DGAT2L7PQ6IED9 249 aa7.29□□□□□ -1.24
HLA-DMB-261ENST00000487996 ERASQ7Z444 233 aa7.29□□□□□ -1.24
HLA-DMB-261ENST00000487996 TMEM101Q96IK0 257 aa7.29□□□□□ -1.24
HLA-DMB-261ENST00000487996 SCGB3A1Q96QR1 104 aa7.29□□□□□ -1.24
HLA-DMB-261ENST00000487996 TIMM17AQ99595 171 aa7.29□□□□□ -1.24
HLA-DMB-261ENST00000487996 TIMM21Q9BVV7 248 aa7.29□□□□□ -1.24
HLA-DMB-261ENST00000487996 PYGO1Q9Y3Y4 419 aa7.29□□□□□ -1.24
HLA-DMB-261ENST00000487996 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms