RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 Q8N814 137 aa11.3□□□□□ -0.6
HMG20B-212ENST00000487894 DEFB104AQ8WTQ1 72 aa11.3□□□□□ -0.6
HMG20B-212ENST00000487894 RMI2Q96E14 147 aa11.3□□□□□ -0.6
HMG20B-212ENST00000487894 NAT8BQ9UHF3 227 aa11.3□□□□□ -0.6
HMG20B-212ENST00000487894 IGKV2D-24A0A075B6R9 120 aa11.29□□□□□ -0.6
HMG20B-212ENST00000487894 ANGP03950 147 aaKnown RBP11.29□□□□□ -0.6
HMG20B-212ENST00000487894 RBX1P62877 108 aa11.29□□□□□ -0.6
HMG20B-212ENST00000487894 ENHOQ6UWT2 76 aa11.29□□□□□ -0.6
HMG20B-212ENST00000487894 RNF185Q96GF1 192 aa11.29□□□□□ -0.6
HMG20B-212ENST00000487894 COX11Q9Y6N1 276 aa11.29□□□□□ -0.6
HMG20B-212ENST00000487894 SMIM27A0A1W2PRY6 76 aa11.28□□□□□ -0.6
HMG20B-212ENST00000487894 GAS8-AS1O95177 125 aa11.28□□□□□ -0.6
HMG20B-212ENST00000487894 Q0VG73 95 aa11.28□□□□□ -0.6
HMG20B-212ENST00000487894 RIGQ13278 110 aa11.28□□□□□ -0.6
HMG20B-212ENST00000487894 COTL1Q14019 142 aa11.28□□□□□ -0.6
HMG20B-212ENST00000487894 CLLU1Q5K131 121 aa11.28□□□□□ -0.6
HMG20B-212ENST00000487894 TMEM243Q9BU79 118 aa11.28□□□□□ -0.6
HMG20B-212ENST00000487894 CRPP02741 224 aa11.27□□□□□ -0.61
HMG20B-212ENST00000487894 IFITM2Q01629 132 aa11.27□□□□□ -0.61
HMG20B-212ENST00000487894 ANKRD39Q53RE8 183 aa11.27□□□□□ -0.61
HMG20B-212ENST00000487894 AMN1Q8IY45 258 aa11.27□□□□□ -0.61
HMG20B-212ENST00000487894 NTN5Q8WTR8 489 aaPredicted RBP11.27□□□□□ -0.61
HMG20B-212ENST00000487894 TRBV6-5A0A0K0K1A5 114 aa11.26□□□□□ -0.61
HMG20B-212ENST00000487894 SDHAF1A6NFY7 115 aa11.26□□□□□ -0.61
HMG20B-212ENST00000487894 LECT2O14960 151 aa11.26□□□□□ -0.61
HMG20B-212ENST00000487894 RAB4AP20338 218 aa11.26□□□□□ -0.61
HMG20B-212ENST00000487894 AMTP48728 403 aa11.26□□□□□ -0.61
HMG20B-212ENST00000487894 PRR34Q9NV39 138 aa11.26□□□□□ -0.61
HMG20B-212ENST00000487894 DNAH8Q96JB1 4490 aa11.25□□□□□ -0.61
HMG20B-212ENST00000487894 IGLV5-52A0A0A0MRZ9 124 aa11.25□□□□□ -0.61
HMG20B-212ENST00000487894 KRTAP10-1P60331 282 aa11.25□□□□□ -0.61
HMG20B-212ENST00000487894 CLPSL2Q6UWE3 100 aa11.25□□□□□ -0.61
HMG20B-212ENST00000487894 C20orf203Q8NBC4 194 aa11.25□□□□□ -0.61
HMG20B-212ENST00000487894 BAALCQ8WXS3 180 aa11.25□□□□□ -0.61
HMG20B-212ENST00000487894 C1orf43Q9BWL3 253 aa11.25□□□□□ -0.61
HMG20B-212ENST00000487894 RPS10P46783 165 aaKnown RBP11.24□□□□□ -0.61
HMG20B-212ENST00000487894 MIAQ16674 131 aa11.24□□□□□ -0.61
HMG20B-212ENST00000487894 LINC00269Q8N2A0 174 aa11.24□□□□□ -0.61
HMG20B-212ENST00000487894 MRAP2Q96G30 205 aa11.24□□□□□ -0.61
HMG20B-212ENST00000487894 IGLV4-60A0A075B6I1 120 aa11.23□□□□□ -0.61
HMG20B-212ENST00000487894 A0A1B0GUV1 79 aa11.23□□□□□ -0.61
HMG20B-212ENST00000487894 NCR2O95944 276 aa11.23□□□□□ -0.61
HMG20B-212ENST00000487894 GCSHP23434 173 aa11.23□□□□□ -0.61
HMG20B-212ENST00000487894 ABCA13Q86UQ4 5058 aa11.23□□□□□ -0.61
HMG20B-212ENST00000487894 SMKR1H3BMG3 65 aa11.22□□□□□ -0.61
HMG20B-212ENST00000487894 UBE2L6O14933 153 aa11.22□□□□□ -0.61
HMG20B-212ENST00000487894 APCSP02743 223 aa11.22□□□□□ -0.61
HMG20B-212ENST00000487894 TMEM70Q9BUB7 260 aa11.22□□□□□ -0.61
HMG20B-212ENST00000487894 ST20Q9HBF5 79 aa11.22□□□□□ -0.61
HMG20B-212ENST00000487894 A0A1B0GW15 77 aa11.21□□□□□ -0.61
HMG20B-212ENST00000487894 I3L3M4 83 aa11.21□□□□□ -0.61
HMG20B-212ENST00000487894 CAMPP49913 170 aa11.21□□□□□ -0.61
HMG20B-212ENST00000487894 REG3AQ06141 175 aa11.21□□□□□ -0.61
HMG20B-212ENST00000487894 PNRC1Q12796 327 aaPredicted RBP11.21□□□□□ -0.61
HMG20B-212ENST00000487894 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.2□□□□□ -0.62
HMG20B-212ENST00000487894 A0A1B0GXF2 115 aa11.2□□□□□ -0.62
HMG20B-212ENST00000487894 PMCHP20382 165 aa11.2□□□□□ -0.62
HMG20B-212ENST00000487894 POLR2KP53803 58 aaKnown RBP11.2□□□□□ -0.62
HMG20B-212ENST00000487894 MRPL51Q4U2R6 128 aaKnown RBP11.2□□□□□ -0.62
HMG20B-212ENST00000487894 FAM104BQ5XKR9 115 aa11.2□□□□□ -0.62
HMG20B-212ENST00000487894 MRPL54Q6P161 138 aaKnown RBP11.2□□□□□ -0.62
HMG20B-212ENST00000487894 KRTAP26-1Q6PEX3 210 aa11.2□□□□□ -0.62
HMG20B-212ENST00000487894 NRACQ8N912 160 aa11.2□□□□□ -0.62
HMG20B-212ENST00000487894 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.19□□□□□ -0.62
HMG20B-212ENST00000487894 IGKV2-29A2NJV5 120 aaPredicted RBP11.19□□□□□ -0.62
HMG20B-212ENST00000487894 PPP1R2P9O14990 202 aa11.19□□□□□ -0.62
HMG20B-212ENST00000487894 TSHBP01222 138 aa11.19□□□□□ -0.62
HMG20B-212ENST00000487894 HLA-DQA1P01909 254 aa11.19□□□□□ -0.62
HMG20B-212ENST00000487894 TMEM242Q9NWH2 141 aa11.19□□□□□ -0.62
HMG20B-212ENST00000487894 TRBV27A0A0K0K1C4 114 aa11.18□□□□□ -0.62
HMG20B-212ENST00000487894 HBBP68871 147 aa11.18□□□□□ -0.62
HMG20B-212ENST00000487894 IGLV10-54A0A075B6I4 117 aa11.17□□□□□ -0.62
HMG20B-212ENST00000487894 H7C423 109 aa11.17□□□□□ -0.62
HMG20B-212ENST00000487894 ESDP10768 282 aa11.17□□□□□ -0.62
HMG20B-212ENST00000487894 ADCYAP1P18509 176 aa11.17□□□□□ -0.62
HMG20B-212ENST00000487894 XGP55808 180 aa11.17□□□□□ -0.62
HMG20B-212ENST00000487894 KRTAP4-5Q9BYR2 181 aa11.17□□□□□ -0.62
HMG20B-212ENST00000487894 PPP1R17O96001 155 aa11.16□□□□□ -0.62
HMG20B-212ENST00000487894 S100A8P05109 93 aa11.16□□□□□ -0.62
HMG20B-212ENST00000487894 FGF6P10767 208 aa11.16□□□□□ -0.62
HMG20B-212ENST00000487894 AMMECR1LQ6DCA0 310 aa11.16□□□□□ -0.62
HMG20B-212ENST00000487894 UQCC3Q6UW78 93 aa11.16□□□□□ -0.62
HMG20B-212ENST00000487894 TRAV8-4A0A0B4J246 113 aa11.15□□□□□ -0.62
HMG20B-212ENST00000487894 USP17L23D6RBM5 183 aa11.15□□□□□ -0.62
HMG20B-212ENST00000487894 MT-ND4LP03901 98 aa11.15□□□□□ -0.62
HMG20B-212ENST00000487894 SUMO2P61956 95 aaKnown RBP11.15□□□□□ -0.62
HMG20B-212ENST00000487894 ATP5L2Q7Z4Y8 100 aa11.15□□□□□ -0.62
HMG20B-212ENST00000487894 Q8N1X5 172 aa11.15□□□□□ -0.62
HMG20B-212ENST00000487894 LINC00862A6NCI5 91 aa11.14□□□□□ -0.63
HMG20B-212ENST00000487894 F8W036 122 aa11.14□□□□□ -0.63
HMG20B-212ENST00000487894 C14orf177Q52M58 125 aa11.14□□□□□ -0.63
HMG20B-212ENST00000487894 RNASEKQ6P5S7 137 aaKnown RBP11.14□□□□□ -0.63
HMG20B-212ENST00000487894 TMEM218A2RU14 115 aa11.13□□□□□ -0.63
HMG20B-212ENST00000487894 VCYO14598 125 aa11.13□□□□□ -0.63
HMG20B-212ENST00000487894 ZNF25P17030 456 aaPredicted RBP11.13□□□□□ -0.63
HMG20B-212ENST00000487894 CKS2P33552 79 aa11.13□□□□□ -0.63
HMG20B-212ENST00000487894 TRBV24-1A0A075B6N3 115 aa11.12□□□□□ -0.63
HMG20B-212ENST00000487894 C7orf77A4D0Y5 90 aa11.12□□□□□ -0.63
HMG20B-212ENST00000487894 D6R8Y8 96 aa11.12□□□□□ -0.63
HMG20B-212ENST00000487894 LINC01620Q4KN68 170 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms