RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 FAT2Q9NYQ8 4349 aa6.27□□□□□ -1.41
LCN2-205ENST00000487719 RBX1P62877 108 aa6.27□□□□□ -1.41
LCN2-205ENST00000487719 C14orf177Q52M58 125 aa6.27□□□□□ -1.41
LCN2-205ENST00000487719 NTM-AS1Q6ZSK4 140 aa6.27□□□□□ -1.41
LCN2-205ENST00000487719 AMN1Q8IY45 258 aa6.27□□□□□ -1.41
LCN2-205ENST00000487719 Q8N3U1 123 aa6.27□□□□□ -1.41
LCN2-205ENST00000487719 RPL39LQ96EH5 51 aaKnown RBP6.27□□□□□ -1.41
LCN2-205ENST00000487719 BTF3L4Q96K17 158 aa6.27□□□□□ -1.41
LCN2-205ENST00000487719 IGLV5-52A0A0A0MRZ9 124 aa6.26□□□□□ -1.41
LCN2-205ENST00000487719 TRBV6-5A0A0K0K1A5 114 aa6.26□□□□□ -1.41
LCN2-205ENST00000487719 A0A1B0GUV1 79 aa6.26□□□□□ -1.41
LCN2-205ENST00000487719 LINC00862A6NCI5 91 aa6.26□□□□□ -1.41
LCN2-205ENST00000487719 H7C423 109 aa6.26□□□□□ -1.41
LCN2-205ENST00000487719 TCAPO15273 167 aa6.26□□□□□ -1.41
LCN2-205ENST00000487719 RAB4AP20338 218 aa6.26□□□□□ -1.41
LCN2-205ENST00000487719 FCER1GP30273 86 aa6.26□□□□□ -1.41
LCN2-205ENST00000487719 CKS2P33552 79 aa6.26□□□□□ -1.41
LCN2-205ENST00000487719 MRPL54Q6P161 138 aaKnown RBP6.26□□□□□ -1.41
LCN2-205ENST00000487719 Q8N976 141 aa6.26□□□□□ -1.41
LCN2-205ENST00000487719 TMEM101Q96IK0 257 aa6.26□□□□□ -1.41
LCN2-205ENST00000487719 KIR2DL4Q99706 377 aa6.26□□□□□ -1.41
LCN2-205ENST00000487719 TRAV8-4A0A0B4J246 113 aa6.25□□□□□ -1.41
LCN2-205ENST00000487719 VCYO14598 125 aa6.25□□□□□ -1.41
LCN2-205ENST00000487719 HLA-DQA1P01909 254 aa6.25□□□□□ -1.41
LCN2-205ENST00000487719 FAM104BQ5XKR9 115 aa6.25□□□□□ -1.41
LCN2-205ENST00000487719 RNASEKQ6P5S7 137 aaKnown RBP6.25□□□□□ -1.41
LCN2-205ENST00000487719 COMMD7Q86VX2 200 aa6.25□□□□□ -1.41
LCN2-205ENST00000487719 LINC00269Q8N2A0 174 aa6.25□□□□□ -1.41
LCN2-205ENST00000487719 TMEM18Q96B42 140 aa6.25□□□□□ -1.41
LCN2-205ENST00000487719 TMEM218A2RU14 115 aa6.24□□□□□ -1.41
LCN2-205ENST00000487719 CDK2AP2O75956 126 aa6.24□□□□□ -1.41
LCN2-205ENST00000487719 PPBPP02775 128 aa6.24□□□□□ -1.41
LCN2-205ENST00000487719 ZNF25P17030 456 aaPredicted RBP6.24□□□□□ -1.41
LCN2-205ENST00000487719 S100PP25815 95 aa6.24□□□□□ -1.41
LCN2-205ENST00000487719 KRTAP10-2P60368 255 aa6.24□□□□□ -1.41
LCN2-205ENST00000487719 SUMO2P61956 95 aaKnown RBP6.24□□□□□ -1.41
LCN2-205ENST00000487719 IFITM2Q01629 132 aa6.24□□□□□ -1.41
LCN2-205ENST00000487719 REG3AQ06141 175 aa6.24□□□□□ -1.41
LCN2-205ENST00000487719 CLPSL2Q6UWE3 100 aa6.24□□□□□ -1.41
LCN2-205ENST00000487719 Q8N814 137 aa6.24□□□□□ -1.41
LCN2-205ENST00000487719 TMEM70Q9BUB7 260 aa6.24□□□□□ -1.41
LCN2-205ENST00000487719 PKD1P98161 4303 aa6.23□□□□□ -1.41
LCN2-205ENST00000487719 TRBV27A0A0K0K1C4 114 aa6.23□□□□□ -1.41
LCN2-205ENST00000487719 C7orf77A4D0Y5 90 aa6.23□□□□□ -1.41
LCN2-205ENST00000487719 LRCOL1A6NCL2 159 aa6.23□□□□□ -1.41
LCN2-205ENST00000487719 GCSHP23434 173 aa6.23□□□□□ -1.41
LCN2-205ENST00000487719 MRPL51Q4U2R6 128 aaKnown RBP6.23□□□□□ -1.41
LCN2-205ENST00000487719 DGAT2L7PQ6IED9 249 aa6.23□□□□□ -1.41
LCN2-205ENST00000487719 DEFB104AQ8WTQ1 72 aa6.23□□□□□ -1.41
LCN2-205ENST00000487719 RNF185Q96GF1 192 aa6.23□□□□□ -1.41
LCN2-205ENST00000487719 C20orf78Q9BR46 151 aa6.23□□□□□ -1.41
LCN2-205ENST00000487719 SEC11CQ9BY50 192 aa6.23□□□□□ -1.41
LCN2-205ENST00000487719 CTDSP1Q9GZU7 261 aa6.23□□□□□ -1.41
LCN2-205ENST00000487719 PRR34Q9NV39 138 aa6.23□□□□□ -1.41
LCN2-205ENST00000487719 TMEM242Q9NWH2 141 aa6.23□□□□□ -1.41
LCN2-205ENST00000487719 D6R8Y8 96 aa6.22□□□□□ -1.41
LCN2-205ENST00000487719 SMKR1H3BMG3 65 aa6.22□□□□□ -1.41
LCN2-205ENST00000487719 PHOX2AO14813 284 aa6.22□□□□□ -1.41
LCN2-205ENST00000487719 LECT2O14960 151 aa6.22□□□□□ -1.41
LCN2-205ENST00000487719 FGF6P10767 208 aa6.22□□□□□ -1.41
LCN2-205ENST00000487719 RPS10P46783 165 aaKnown RBP6.22□□□□□ -1.41
LCN2-205ENST00000487719 NDUFA5Q16718 116 aa6.22□□□□□ -1.41
LCN2-205ENST00000487719 ENHOQ6UWT2 76 aa6.22□□□□□ -1.41
LCN2-205ENST00000487719 ORMDL3Q8N138 153 aa6.22□□□□□ -1.41
LCN2-205ENST00000487719 OR5A1Q8NGJ0 315 aa6.22□□□□□ -1.41
LCN2-205ENST00000487719 BAALCQ8WXS3 180 aa6.22□□□□□ -1.41
LCN2-205ENST00000487719 IMMP2LQ96T52 175 aa6.22□□□□□ -1.41
LCN2-205ENST00000487719 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.21□□□□□ -1.42
LCN2-205ENST00000487719 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.21□□□□□ -1.42
LCN2-205ENST00000487719 TRAV9-1A0A075B6T8 112 aa6.21□□□□□ -1.42
LCN2-205ENST00000487719 IGKV3OR2-268A0A0C4DH90 116 aa6.21□□□□□ -1.42
LCN2-205ENST00000487719 A0A1B0GXF2 115 aa6.21□□□□□ -1.42
LCN2-205ENST00000487719 IGKV2-29A2NJV5 120 aaPredicted RBP6.21□□□□□ -1.42
LCN2-205ENST00000487719 RAB5AP20339 215 aa6.21□□□□□ -1.42
LCN2-205ENST00000487719 POLR2KP53803 58 aaKnown RBP6.21□□□□□ -1.42
LCN2-205ENST00000487719 LAMTOR2Q9Y2Q5 125 aa6.21□□□□□ -1.42
LCN2-205ENST00000487719 IGLV4-60A0A075B6I1 120 aa6.2□□□□□ -1.42
LCN2-205ENST00000487719 IGLV10-54A0A075B6I4 117 aa6.2□□□□□ -1.42
LCN2-205ENST00000487719 TRBV24-1A0A075B6N3 115 aa6.2□□□□□ -1.42
LCN2-205ENST00000487719 TNFRSF6BO95407 300 aa6.2□□□□□ -1.42
LCN2-205ENST00000487719 TSHBP01222 138 aa6.2□□□□□ -1.42
LCN2-205ENST00000487719 RPL32P62910 135 aaKnown RBP6.2□□□□□ -1.42
LCN2-205ENST00000487719 CFAP161Q6P656 301 aa6.2□□□□□ -1.42
LCN2-205ENST00000487719 NRACQ8N912 160 aa6.2□□□□□ -1.42
LCN2-205ENST00000487719 C20orf203Q8NBC4 194 aa6.2□□□□□ -1.42
LCN2-205ENST00000487719 CLRN3Q8NCR9 226 aa6.2□□□□□ -1.42
LCN2-205ENST00000487719 PRELID3AQ96N28 172 aa6.2□□□□□ -1.42
LCN2-205ENST00000487719 AP5S1Q9NUS5 200 aa6.2□□□□□ -1.42
LCN2-205ENST00000487719 USP17L23D6RBM5 183 aa6.19□□□□□ -1.42
LCN2-205ENST00000487719 RHEBQ15382 184 aa6.19□□□□□ -1.42
LCN2-205ENST00000487719 SS18Q15532 418 aa6.19□□□□□ -1.42
LCN2-205ENST00000487719 TMEM136Q6ZRR5 245 aa6.19□□□□□ -1.42
LCN2-205ENST00000487719 SMIM2Q9BVW6 85 aa6.19□□□□□ -1.42
LCN2-205ENST00000487719 MAP1LC3AQ9H492 121 aa6.19□□□□□ -1.42
LCN2-205ENST00000487719 DNAH11Q96DT5 4516 aa6.19□□□□□ -1.42
LCN2-205ENST00000487719 GAS8-AS1O95177 125 aa6.18□□□□□ -1.42
LCN2-205ENST00000487719 ESDP10768 282 aa6.18□□□□□ -1.42
LCN2-205ENST00000487719 ADCYAP1P18509 176 aa6.18□□□□□ -1.42
LCN2-205ENST00000487719 COX19Q49B96 90 aa6.18□□□□□ -1.42
LCN2-205ENST00000487719 MRPL52Q86TS9 123 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms