RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 CENPEQ02224 2701 aa19.01■□□□□ 0.63
HLA-C-208ENST00000487245 C16orf95Q9H693 158 aa19■□□□□ 0.63
HLA-C-208ENST00000487245 CD28P10747 220 aa18.98■□□□□ 0.63
HLA-C-208ENST00000487245 FAM104AQ969W3 186 aa18.98■□□□□ 0.63
HLA-C-208ENST00000487245 YAE1D1Q9NRH1 226 aa18.98■□□□□ 0.63
HLA-C-208ENST00000487245 TSSC4Q9Y5U2 329 aaPredicted RBP18.98■□□□□ 0.63
HLA-C-208ENST00000487245 TNFRSF18Q9Y5U5 241 aa18.98■□□□□ 0.63
HLA-C-208ENST00000487245 A0A0J9YXV3 536 aa18.97■□□□□ 0.63
HLA-C-208ENST00000487245 CFC1BP0CG36 223 aa18.97■□□□□ 0.63
HLA-C-208ENST00000487245 CFC1P0CG37 223 aa18.97■□□□□ 0.63
HLA-C-208ENST00000487245 APOMO95445 188 aa18.97■□□□□ 0.63
HLA-C-208ENST00000487245 RNASE1P07998 156 aaKnown RBP18.97■□□□□ 0.63
HLA-C-208ENST00000487245 KRTAP1-1Q07627 177 aa18.97■□□□□ 0.63
HLA-C-208ENST00000487245 BEAN1Q3B7T3 259 aa18.97■□□□□ 0.63
HLA-C-208ENST00000487245 C11orf72Q8NBR9 251 aa18.97■□□□□ 0.63
HLA-C-208ENST00000487245 CMC4P56277 68 aaPredicted RBP18.96■□□□□ 0.63
HLA-C-208ENST00000487245 MRPS36P82909 103 aaKnown RBP18.96■□□□□ 0.63
HLA-C-208ENST00000487245 ODF3L2Q3SX64 289 aa18.96■□□□□ 0.63
HLA-C-208ENST00000487245 STHQ8IWL8 128 aa18.96■□□□□ 0.63
HLA-C-208ENST00000487245 A0A1W2PRX2 142 aa18.95■□□□□ 0.62
HLA-C-208ENST00000487245 ETDBQ3ZM63 59 aa18.95■□□□□ 0.62
HLA-C-208ENST00000487245 CFAP126Q5VTH2 177 aa18.95■□□□□ 0.62
HLA-C-208ENST00000487245 HIST2H2BCQ6DN03 193 aa18.95■□□□□ 0.62
HLA-C-208ENST00000487245 C10orf126Q8N4M7 172 aa18.95■□□□□ 0.62
HLA-C-208ENST00000487245 ATP6V0E2Q8NHE4 81 aa18.95■□□□□ 0.62
HLA-C-208ENST00000487245 DNAJC30Q96LL9 226 aa18.95■□□□□ 0.62
HLA-C-208ENST00000487245 APCP25054 2843 aa18.95■□□□□ 0.62
HLA-C-208ENST00000487245 PROK1P58294 105 aa18.94■□□□□ 0.62
HLA-C-208ENST00000487245 IGHV3-73A0A0B4J1V6 119 aa18.94■□□□□ 0.62
HLA-C-208ENST00000487245 SH2D6Q7Z4S9 175 aa18.94■□□□□ 0.62
HLA-C-208ENST00000487245 HIST2H2BDQ6DRA6 164 aa18.93■□□□□ 0.62
HLA-C-208ENST00000487245 SPANXA1Q9NS26 97 aa18.93■□□□□ 0.62
HLA-C-208ENST00000487245 NACAE9PAV3 2078 aa18.93■□□□□ 0.62
HLA-C-208ENST00000487245 C11orf44Q8N8P7 122 aa18.92■□□□□ 0.62
HLA-C-208ENST00000487245 TRBV20-1A0A075B6N2 111 aa18.92■□□□□ 0.62
HLA-C-208ENST00000487245 RS1O15537 224 aa18.92■□□□□ 0.62
HLA-C-208ENST00000487245 LINC01006Q8NI28 216 aa18.92■□□□□ 0.62
HLA-C-208ENST00000487245 CITED2Q99967 270 aaPredicted RBP18.92■□□□□ 0.62
HLA-C-208ENST00000487245 PRO1854Q9UHT4 67 aa18.92■□□□□ 0.62
HLA-C-208ENST00000487245 IGHV3-53P01767 116 aa18.91■□□□□ 0.62
HLA-C-208ENST00000487245 PRM2P04554 102 aa18.91■□□□□ 0.62
HLA-C-208ENST00000487245 CHCHD7Q9BUK0 85 aa18.91■□□□□ 0.62
HLA-C-208ENST00000487245 LOC107984156A0A0G2JMH3 177 aa18.9■□□□□ 0.62
HLA-C-208ENST00000487245 ARL17AQ8IVW1 177 aa18.9■□□□□ 0.62
HLA-C-208ENST00000487245 TENM4Q6N022 2769 aa18.9■□□□□ 0.62
HLA-C-208ENST00000487245 TMEM238C9JI98 176 aa18.9■□□□□ 0.62
HLA-C-208ENST00000487245 A0A0B4J2C4 111 aa18.89■□□□□ 0.61
HLA-C-208ENST00000487245 PSMB2P49721 201 aa18.89■□□□□ 0.61
HLA-C-208ENST00000487245 SMCPP49901 116 aaPredicted RBP18.89■□□□□ 0.61
HLA-C-208ENST00000487245 Q6ZSN1 163 aa18.89■□□□□ 0.61
HLA-C-208ENST00000487245 XCL2Q9UBD3 114 aa18.89■□□□□ 0.61
HLA-C-208ENST00000487245 SPATA25Q9BR10 227 aa18.88■□□□□ 0.61
HLA-C-208ENST00000487245 ITPR3Q14573 2671 aa18.88■□□□□ 0.61
HLA-C-208ENST00000487245 TINCRA0A1B0GVN0 87 aa18.88■□□□□ 0.61
HLA-C-208ENST00000487245 UBE2D4Q9Y2X8 147 aa18.88■□□□□ 0.61
HLA-C-208ENST00000487245 IGHV3-30-3P0DP02 117 aa18.87■□□□□ 0.61
HLA-C-208ENST00000487245 TIMM21Q9BVV7 248 aa18.87■□□□□ 0.61
HLA-C-208ENST00000487245 C1QTNF4Q9BXJ3 329 aa18.87■□□□□ 0.61
HLA-C-208ENST00000487245 A0A0J9YXY3 114 aa18.86■□□□□ 0.61
HLA-C-208ENST00000487245 A4D1N5 150 aa18.86■□□□□ 0.61
HLA-C-208ENST00000487245 SBSPONQ8IVN8 264 aa18.86■□□□□ 0.61
HLA-C-208ENST00000487245 MTURNQ8N3F0 131 aa18.86■□□□□ 0.61
HLA-C-208ENST00000487245 ZNF418Q8TF45 676 aaPredicted RBP18.86■□□□□ 0.61
HLA-C-208ENST00000487245 HELZ2Q9BYK8 2649 aaKnown RBP18.86■□□□□ 0.61
HLA-C-208ENST00000487245 C1orf158Q8N1D5 194 aa18.86■□□□□ 0.61
HLA-C-208ENST00000487245 TMEM263Q8WUH6 116 aaKnown RBP18.86■□□□□ 0.61
HLA-C-208ENST00000487245 TRAV16A0A0A6YYK6 109 aaPredicted RBP18.85■□□□□ 0.61
HLA-C-208ENST00000487245 IGHV1-58A0A0C4DH39 117 aa18.85■□□□□ 0.61
HLA-C-208ENST00000487245 GAGE12HA6NDE8 117 aa18.85■□□□□ 0.61
HLA-C-208ENST00000487245 MYO9AB2RTY4 2548 aa18.84■□□□□ 0.61
HLA-C-208ENST00000487245 TCL1BO95988 128 aa18.84■□□□□ 0.61
HLA-C-208ENST00000487245 IGHV3-33P01772 117 aa18.84■□□□□ 0.61
HLA-C-208ENST00000487245 MUSTN1Q8IVN3 82 aa18.84■□□□□ 0.61
HLA-C-208ENST00000487245 IGHV3-64A0A075B6Q5 118 aa18.83■□□□□ 0.6
HLA-C-208ENST00000487245 SCGB1A1P11684 91 aa18.83■□□□□ 0.6
HLA-C-208ENST00000487245 IL17DQ8TAD2 202 aa18.83■□□□□ 0.6
HLA-C-208ENST00000487245 SIGMAR1Q99720 223 aa18.83■□□□□ 0.6
HLA-C-208ENST00000487245 FAM110AQ9BQ89 295 aa18.83■□□□□ 0.6
HLA-C-208ENST00000487245 Q9UF83 564 aa18.83■□□□□ 0.6
HLA-C-208ENST00000487245 EIF4EBP3O60516 100 aaPredicted RBP18.82■□□□□ 0.6
HLA-C-208ENST00000487245 AZU1P20160 251 aa18.82■□□□□ 0.6
HLA-C-208ENST00000487245 FOXI1Q12951 378 aa18.82■□□□□ 0.6
HLA-C-208ENST00000487245 CEMP1Q6PRD7 247 aaPredicted RBP18.82■□□□□ 0.6
HLA-C-208ENST00000487245 LITAFQ99732 161 aa18.82■□□□□ 0.6
HLA-C-208ENST00000487245 NDUFA7O95182 113 aa18.81■□□□□ 0.6
HLA-C-208ENST00000487245 HILS1P60008 231 aa18.8■□□□□ 0.6
HLA-C-208ENST00000487245 SFTA2Q6UW10 78 aa18.8■□□□□ 0.6
HLA-C-208ENST00000487245 VSIG2Q96IQ7 327 aa18.8■□□□□ 0.6
HLA-C-208ENST00000487245 SPANXDQ9BXN6 97 aa18.8■□□□□ 0.6
HLA-C-208ENST00000487245 SPANXCQ9NY87 97 aa18.8■□□□□ 0.6
HLA-C-208ENST00000487245 IGHV3OR16-12A0A075B7B8 117 aa18.78■□□□□ 0.6
HLA-C-208ENST00000487245 M0QXV9 152 aa18.78■□□□□ 0.6
HLA-C-208ENST00000487245 ERG28Q9UKR5 140 aa18.78■□□□□ 0.6
HLA-C-208ENST00000487245 INSL3P51460 131 aa18.77■□□□□ 0.6
HLA-C-208ENST00000487245 Q6ZUT4 128 aa18.77■□□□□ 0.6
HLA-C-208ENST00000487245 TLN2Q9Y4G6 2542 aa18.77■□□□□ 0.6
HLA-C-208ENST00000487245 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.77■□□□□ 0.6
HLA-C-208ENST00000487245 IGKV2-29A2NJV5 120 aaPredicted RBP18.77■□□□□ 0.6
HLA-C-208ENST00000487245 TIRAPP58753 221 aa18.77■□□□□ 0.6
HLA-C-208ENST00000487245 IGLV1-51P01701 117 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms