RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 M0R2N4 97 aa13.15□□□□□ -0.3
PCOLCE-208ENST00000487172 BTF3P20290 206 aaKnown RBP13.15□□□□□ -0.3
PCOLCE-208ENST00000487172 PKIAP61925 76 aa13.15□□□□□ -0.3
PCOLCE-208ENST00000487172 CBLN2Q8IUK8 224 aa13.15□□□□□ -0.3
PCOLCE-208ENST00000487172 DNAH6Q9C0G6 4158 aa13.15□□□□□ -0.3
PCOLCE-208ENST00000487172 C10orf126Q8N4M7 172 aa13.14□□□□□ -0.31
PCOLCE-208ENST00000487172 KRTAP1-5Q9BYS1 174 aa13.14□□□□□ -0.31
PCOLCE-208ENST00000487172 TSHBP01222 138 aa13.13□□□□□ -0.31
PCOLCE-208ENST00000487172 AMTP48728 403 aa13.13□□□□□ -0.31
PCOLCE-208ENST00000487172 CHCHD5Q9BSY4 110 aa13.13□□□□□ -0.31
PCOLCE-208ENST00000487172 TMEM243Q9BU79 118 aa13.13□□□□□ -0.31
PCOLCE-208ENST00000487172 DEFB104AQ8WTQ1 72 aa13.12□□□□□ -0.31
PCOLCE-208ENST00000487172 KIR2DL4Q99706 377 aa13.12□□□□□ -0.31
PCOLCE-208ENST00000487172 SMIM2Q9BVW6 85 aa13.12□□□□□ -0.31
PCOLCE-208ENST00000487172 MRPL18Q9H0U6 180 aaKnown RBP13.12□□□□□ -0.31
PCOLCE-208ENST00000487172 A0A087WX48 190 aa13.11□□□□□ -0.31
PCOLCE-208ENST00000487172 TMEM262E9PQX1 116 aa13.11□□□□□ -0.31
PCOLCE-208ENST00000487172 H7C423 109 aa13.11□□□□□ -0.31
PCOLCE-208ENST00000487172 TCAPO15273 167 aa13.11□□□□□ -0.31
PCOLCE-208ENST00000487172 IGHV3-30P01768 117 aa13.11□□□□□ -0.31
PCOLCE-208ENST00000487172 IGHV3-33P01772 117 aa13.11□□□□□ -0.31
PCOLCE-208ENST00000487172 IGHV3-30-3P0DP02 117 aa13.11□□□□□ -0.31
PCOLCE-208ENST00000487172 IGHV3-30-5P0DP03 117 aa13.11□□□□□ -0.31
PCOLCE-208ENST00000487172 ESDP10768 282 aa13.11□□□□□ -0.31
PCOLCE-208ENST00000487172 KIAA1644Q3SXP7 199 aa13.11□□□□□ -0.31
PCOLCE-208ENST00000487172 TRAPPC1Q9Y5R8 145 aa13.11□□□□□ -0.31
PCOLCE-208ENST00000487172 IBA57-AS1B1ANH7 110 aa13.1□□□□□ -0.31
PCOLCE-208ENST00000487172 FABP9Q0Z7S8 132 aa13.1□□□□□ -0.31
PCOLCE-208ENST00000487172 GAGE6Q13070 117 aa13.1□□□□□ -0.31
PCOLCE-208ENST00000487172 MAP1LC3AQ9H492 121 aa13.1□□□□□ -0.31
PCOLCE-208ENST00000487172 HYDINQ4G0P3 5121 aa13.09□□□□□ -0.31
PCOLCE-208ENST00000487172 S100A1P23297 94 aa13.09□□□□□ -0.31
PCOLCE-208ENST00000487172 FCER1GP30273 86 aa13.09□□□□□ -0.31
PCOLCE-208ENST00000487172 Q8N3U1 123 aa13.09□□□□□ -0.31
PCOLCE-208ENST00000487172 ALKBH7Q9BT30 221 aaPredicted RBP13.09□□□□□ -0.31
PCOLCE-208ENST00000487172 A0A1B0GUV1 79 aa13.08□□□□□ -0.32
PCOLCE-208ENST00000487172 UBE2L6O14933 153 aa13.08□□□□□ -0.32
PCOLCE-208ENST00000487172 MPV17L2Q567V2 206 aa13.08□□□□□ -0.32
PCOLCE-208ENST00000487172 C1orf134Q5TEV5 83 aa13.08□□□□□ -0.32
PCOLCE-208ENST00000487172 C6orf223Q8N319 242 aa13.08□□□□□ -0.32
PCOLCE-208ENST00000487172 LAGE3Q14657 143 aa13.07□□□□□ -0.32
PCOLCE-208ENST00000487172 RYR2Q92736 4967 aa13.06□□□□□ -0.32
PCOLCE-208ENST00000487172 LOC389332A0A1B0GUA5 103 aa13.06□□□□□ -0.32
PCOLCE-208ENST00000487172 RBX1P62877 108 aa13.06□□□□□ -0.32
PCOLCE-208ENST00000487172 Q8N8P6 123 aa13.06□□□□□ -0.32
PCOLCE-208ENST00000487172 COLCA2A8K830 154 aa13.05□□□□□ -0.32
PCOLCE-208ENST00000487172 K7EMI3 77 aa13.05□□□□□ -0.32
PCOLCE-208ENST00000487172 ATP6V1G1O75348 118 aa13.05□□□□□ -0.32
PCOLCE-208ENST00000487172 NFE4Q86UQ8 179 aa13.05□□□□□ -0.32
PCOLCE-208ENST00000487172 Q8N976 141 aa13.05□□□□□ -0.32
PCOLCE-208ENST00000487172 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.04□□□□□ -0.32
PCOLCE-208ENST00000487172 IGKV2-29A2NJV5 120 aaPredicted RBP13.04□□□□□ -0.32
PCOLCE-208ENST00000487172 NXT2Q9NPJ8 142 aaKnown RBP13.04□□□□□ -0.32
PCOLCE-208ENST00000487172 KLK12Q9UKR0 248 aa13.04□□□□□ -0.32
PCOLCE-208ENST00000487172 TRAV8-3A0A0A6YYJ7 113 aa13.03□□□□□ -0.32
PCOLCE-208ENST00000487172 SCO1O75880 301 aa13.03□□□□□ -0.32
PCOLCE-208ENST00000487172 FGF6P10767 208 aa13.03□□□□□ -0.32
PCOLCE-208ENST00000487172 ZNF25P17030 456 aaPredicted RBP13.03□□□□□ -0.32
PCOLCE-208ENST00000487172 RAB5AP20339 215 aa13.03□□□□□ -0.32
PCOLCE-208ENST00000487172 C20orf203Q8NBC4 194 aa13.03□□□□□ -0.32
PCOLCE-208ENST00000487172 RTL8CO15255 209 aa13.02□□□□□ -0.33
PCOLCE-208ENST00000487172 IFI27P40305 119 aaPredicted RBP13.02□□□□□ -0.33
PCOLCE-208ENST00000487172 MRPL52Q86TS9 123 aaKnown RBP13.02□□□□□ -0.33
PCOLCE-208ENST00000487172 TMEM18Q96B42 140 aa13.02□□□□□ -0.33
PCOLCE-208ENST00000487172 IGLV4-60A0A075B6I1 120 aa13.01□□□□□ -0.33
PCOLCE-208ENST00000487172 ANGP03950 147 aaKnown RBP13.01□□□□□ -0.33
PCOLCE-208ENST00000487172 SMAGPQ0VAQ4 97 aa13.01□□□□□ -0.33
PCOLCE-208ENST00000487172 AMMECR1LQ6DCA0 310 aa13.01□□□□□ -0.33
PCOLCE-208ENST00000487172 PRR34Q9NV39 138 aa13.01□□□□□ -0.33
PCOLCE-208ENST00000487172 Q0VG73 95 aa13□□□□□ -0.33
PCOLCE-208ENST00000487172 ORMDL2Q53FV1 153 aa13□□□□□ -0.33
PCOLCE-208ENST00000487172 Q6ZRN7 208 aaPredicted RBP13□□□□□ -0.33
PCOLCE-208ENST00000487172 PRSS3P2Q8NHM4 247 aa13□□□□□ -0.33
PCOLCE-208ENST00000487172 CSDC2Q9Y534 153 aaKnown RBP13□□□□□ -0.33
PCOLCE-208ENST00000487172 LINC01546A6NGU7 62 aa12.99□□□□□ -0.33
PCOLCE-208ENST00000487172 RNASEKQ6P5S7 137 aaKnown RBP12.99□□□□□ -0.33
PCOLCE-208ENST00000487172 ENHOQ6UWT2 76 aa12.99□□□□□ -0.33
PCOLCE-208ENST00000487172 LINC00336Q6ZUF6 198 aa12.99□□□□□ -0.33
PCOLCE-208ENST00000487172 UBE2WQ96B02 151 aa12.99□□□□□ -0.33
PCOLCE-208ENST00000487172 TIMM21Q9BVV7 248 aa12.99□□□□□ -0.33
PCOLCE-208ENST00000487172 RYR3Q15413 4870 aa12.99□□□□□ -0.33
PCOLCE-208ENST00000487172 C18orf32Q8TCD1 76 aa12.98□□□□□ -0.33
PCOLCE-208ENST00000487172 TMEM101Q96IK0 257 aa12.98□□□□□ -0.33
PCOLCE-208ENST00000487172 UBE2D4Q9Y2X8 147 aa12.98□□□□□ -0.33
PCOLCE-208ENST00000487172 CRPP02741 224 aa12.97□□□□□ -0.33
PCOLCE-208ENST00000487172 TRGC2P03986 189 aa12.97□□□□□ -0.33
PCOLCE-208ENST00000487172 REG3AQ06141 175 aa12.97□□□□□ -0.33
PCOLCE-208ENST00000487172 MIAQ16674 131 aa12.97□□□□□ -0.33
PCOLCE-208ENST00000487172 LINC00269Q8N2A0 174 aa12.97□□□□□ -0.33
PCOLCE-208ENST00000487172 Q9HAA7 133 aa12.97□□□□□ -0.33
PCOLCE-208ENST00000487172 G0S2P27469 103 aa12.96□□□□□ -0.33
PCOLCE-208ENST00000487172 DGAT2L7PQ6IED9 249 aa12.96□□□□□ -0.33
PCOLCE-208ENST00000487172 OR5A1Q8NGJ0 315 aa12.96□□□□□ -0.33
PCOLCE-208ENST00000487172 RMI2Q96E14 147 aa12.96□□□□□ -0.33
PCOLCE-208ENST00000487172 TM2D2Q9BX73 214 aa12.96□□□□□ -0.33
PCOLCE-208ENST00000487172 CDC42SE2Q9NRR3 84 aa12.96□□□□□ -0.33
PCOLCE-208ENST00000487172 COX11Q9Y6N1 276 aa12.96□□□□□ -0.33
PCOLCE-208ENST00000487172 RPL39P62891 51 aaKnown RBP12.95□□□□□ -0.34
PCOLCE-208ENST00000487172 SPANXA1Q9NS26 97 aa12.95□□□□□ -0.34
PCOLCE-208ENST00000487172 ZNF664Q8N3J9 261 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms