RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 CKS2P33552 79 aa9.87□□□□□ -0.83
LIMS3-205ENST00000487150 Q6ZRN7 208 aaPredicted RBP9.87□□□□□ -0.83
LIMS3-205ENST00000487150 NTM-AS1Q6ZSK4 140 aa9.87□□□□□ -0.83
LIMS3-205ENST00000487150 TMEM70Q9BUB7 260 aa9.87□□□□□ -0.83
LIMS3-205ENST00000487150 Q9HAA7 133 aa9.87□□□□□ -0.83
LIMS3-205ENST00000487150 TRBV27A0A0K0K1C4 114 aa9.86□□□□□ -0.83
LIMS3-205ENST00000487150 PHOX2AO14813 284 aa9.86□□□□□ -0.83
LIMS3-205ENST00000487150 SUMO2P61956 95 aaKnown RBP9.86□□□□□ -0.83
LIMS3-205ENST00000487150 TNP2Q05952 138 aa9.86□□□□□ -0.83
LIMS3-205ENST00000487150 SMAGPQ0VAQ4 97 aa9.86□□□□□ -0.83
LIMS3-205ENST00000487150 KIR2DL4Q99706 377 aa9.86□□□□□ -0.83
LIMS3-205ENST00000487150 C20orf78Q9BR46 151 aa9.86□□□□□ -0.83
LIMS3-205ENST00000487150 VCYO14598 125 aa9.85□□□□□ -0.83
LIMS3-205ENST00000487150 ANGP03950 147 aaKnown RBP9.85□□□□□ -0.83
LIMS3-205ENST00000487150 MRPL51Q4U2R6 128 aaKnown RBP9.85□□□□□ -0.83
LIMS3-205ENST00000487150 MPV17L2Q567V2 206 aa9.85□□□□□ -0.83
LIMS3-205ENST00000487150 ORMDL3Q8N138 153 aa9.85□□□□□ -0.83
LIMS3-205ENST00000487150 SVBPQ8N300 66 aa9.85□□□□□ -0.83
LIMS3-205ENST00000487150 KLK12Q9UKR0 248 aa9.85□□□□□ -0.83
LIMS3-205ENST00000487150 LAMTOR2Q9Y2Q5 125 aa9.85□□□□□ -0.83
LIMS3-205ENST00000487150 TRBV24-1A0A075B6N3 115 aa9.84□□□□□ -0.83
LIMS3-205ENST00000487150 A0A1B0GUV1 79 aa9.84□□□□□ -0.83
LIMS3-205ENST00000487150 A0A1B0GVY2 172 aa9.84□□□□□ -0.83
LIMS3-205ENST00000487150 SNAPINO95295 136 aa9.84□□□□□ -0.83
LIMS3-205ENST00000487150 FCER1GP30273 86 aa9.84□□□□□ -0.83
LIMS3-205ENST00000487150 RPL32P62910 135 aaKnown RBP9.84□□□□□ -0.83
LIMS3-205ENST00000487150 GAGE6Q13070 117 aa9.84□□□□□ -0.83
LIMS3-205ENST00000487150 UBE2WQ96B02 151 aa9.84□□□□□ -0.83
LIMS3-205ENST00000487150 C7orf77A4D0Y5 90 aa9.83□□□□□ -0.84
LIMS3-205ENST00000487150 ZNF25P17030 456 aaPredicted RBP9.83□□□□□ -0.84
LIMS3-205ENST00000487150 RPS10P46783 165 aaKnown RBP9.83□□□□□ -0.84
LIMS3-205ENST00000487150 POLR2KP53803 58 aaKnown RBP9.83□□□□□ -0.84
LIMS3-205ENST00000487150 RBX1P62877 108 aa9.83□□□□□ -0.84
LIMS3-205ENST00000487150 MIAQ16674 131 aa9.83□□□□□ -0.84
LIMS3-205ENST00000487150 COX19Q49B96 90 aa9.83□□□□□ -0.84
LIMS3-205ENST00000487150 AMMECR1LQ6DCA0 310 aa9.83□□□□□ -0.84
LIMS3-205ENST00000487150 ATRAIDQ6UW56 229 aa9.83□□□□□ -0.84
LIMS3-205ENST00000487150 Q8N3U1 123 aa9.83□□□□□ -0.84
LIMS3-205ENST00000487150 NRACQ8N912 160 aa9.83□□□□□ -0.84
LIMS3-205ENST00000487150 CLRN3Q8NCR9 226 aa9.83□□□□□ -0.84
LIMS3-205ENST00000487150 D6R8Y8 96 aa9.82□□□□□ -0.84
LIMS3-205ENST00000487150 C1orf43Q9BWL3 253 aa9.82□□□□□ -0.84
LIMS3-205ENST00000487150 RPS10P5Q9NQ39 176 aa9.82□□□□□ -0.84
LIMS3-205ENST00000487150 DNAH10Q8IVF4 4471 aa9.82□□□□□ -0.84
LIMS3-205ENST00000487150 DNAH2Q9P225 4427 aa9.81□□□□□ -0.84
LIMS3-205ENST00000487150 SMKR1H3BMG3 65 aa9.81□□□□□ -0.84
LIMS3-205ENST00000487150 TNFRSF6BO95407 300 aa9.81□□□□□ -0.84
LIMS3-205ENST00000487150 APOC3P02656 99 aa9.81□□□□□ -0.84
LIMS3-205ENST00000487150 CDPF1Q6NVV7 123 aa9.81□□□□□ -0.84
LIMS3-205ENST00000487150 Q8N976 141 aa9.81□□□□□ -0.84
LIMS3-205ENST00000487150 TMEM18Q96B42 140 aa9.81□□□□□ -0.84
LIMS3-205ENST00000487150 PRR34Q9NV39 138 aa9.81□□□□□ -0.84
LIMS3-205ENST00000487150 FRAS1Q86XX4 4008 aa9.8□□□□□ -0.84
LIMS3-205ENST00000487150 IGKV2D-24A0A075B6R9 120 aa9.8□□□□□ -0.84
LIMS3-205ENST00000487150 TSHBP01222 138 aa9.8□□□□□ -0.84
LIMS3-205ENST00000487150 HLA-DQA1P01909 254 aa9.8□□□□□ -0.84
LIMS3-205ENST00000487150 TMEM136Q6ZRR5 245 aa9.8□□□□□ -0.84
LIMS3-205ENST00000487150 TMEM101Q96IK0 257 aa9.8□□□□□ -0.84
LIMS3-205ENST00000487150 PRELID3AQ96N28 172 aa9.8□□□□□ -0.84
LIMS3-205ENST00000487150 SMIM2Q9BVW6 85 aa9.8□□□□□ -0.84
LIMS3-205ENST00000487150 FAT2Q9NYQ8 4349 aa9.79□□□□□ -0.84
LIMS3-205ENST00000487150 A0A087WTM6 91 aa9.79□□□□□ -0.84
LIMS3-205ENST00000487150 TRAV8-4A0A0B4J246 113 aa9.79□□□□□ -0.84
LIMS3-205ENST00000487150 GAS8-AS1O95177 125 aa9.79□□□□□ -0.84
LIMS3-205ENST00000487150 MT-ND6P03923 174 aa9.79□□□□□ -0.84
LIMS3-205ENST00000487150 PGPEP1Q9NXJ5 209 aa9.79□□□□□ -0.84
LIMS3-205ENST00000487150 FGF6P10767 208 aa9.78□□□□□ -0.84
LIMS3-205ENST00000487150 ESDP10768 282 aa9.78□□□□□ -0.84
LIMS3-205ENST00000487150 REG3AQ06141 175 aa9.78□□□□□ -0.84
LIMS3-205ENST00000487150 RNASEKQ6P5S7 137 aaKnown RBP9.78□□□□□ -0.84
LIMS3-205ENST00000487150 LINC00269Q8N2A0 174 aa9.78□□□□□ -0.84
LIMS3-205ENST00000487150 MAP1LC3AQ9H492 121 aa9.78□□□□□ -0.84
LIMS3-205ENST00000487150 HECTD4Q9Y4D8 3996 aa9.78□□□□□ -0.84
LIMS3-205ENST00000487150 NPYP01303 97 aa9.77□□□□□ -0.85
LIMS3-205ENST00000487150 RAB5AP20339 215 aa9.77□□□□□ -0.85
LIMS3-205ENST00000487150 SPATA12Q7Z6I5 190 aa9.77□□□□□ -0.85
LIMS3-205ENST00000487150 MRPL52Q86TS9 123 aaKnown RBP9.77□□□□□ -0.85
LIMS3-205ENST00000487150 OR5A1Q8NGJ0 315 aa9.77□□□□□ -0.85
LIMS3-205ENST00000487150 NTN5Q8WTR8 489 aaPredicted RBP9.77□□□□□ -0.85
LIMS3-205ENST00000487150 GNB1LQ9BYB4 327 aa9.77□□□□□ -0.85
LIMS3-205ENST00000487150 DNAH17Q9UFH2 4485 aa9.76□□□□□ -0.85
LIMS3-205ENST00000487150 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.76□□□□□ -0.85
LIMS3-205ENST00000487150 IGKV2-29A2NJV5 120 aaPredicted RBP9.76□□□□□ -0.85
LIMS3-205ENST00000487150 C16orf90A8MZG2 172 aa9.76□□□□□ -0.85
LIMS3-205ENST00000487150 C14orf177Q52M58 125 aa9.76□□□□□ -0.85
LIMS3-205ENST00000487150 ENHOQ6UWT2 76 aa9.76□□□□□ -0.85
LIMS3-205ENST00000487150 C20orf203Q8NBC4 194 aa9.76□□□□□ -0.85
LIMS3-205ENST00000487150 DEFB104AQ8WTQ1 72 aa9.76□□□□□ -0.85
LIMS3-205ENST00000487150 IGLV4-60A0A075B6I1 120 aa9.75□□□□□ -0.85
LIMS3-205ENST00000487150 K7EMI3 77 aa9.75□□□□□ -0.85
LIMS3-205ENST00000487150 DGAT2L7PQ6IED9 249 aa9.75□□□□□ -0.85
LIMS3-205ENST00000487150 CSDC2Q9Y534 153 aaKnown RBP9.75□□□□□ -0.85
LIMS3-205ENST00000487150 EPPK1P58107 5090 aaKnown RBP9.75□□□□□ -0.85
LIMS3-205ENST00000487150 LRCOL1A6NCL2 159 aa9.74□□□□□ -0.85
LIMS3-205ENST00000487150 PRSS47A8MTI9 375 aa9.74□□□□□ -0.85
LIMS3-205ENST00000487150 CLPSL2Q6UWE3 100 aa9.74□□□□□ -0.85
LIMS3-205ENST00000487150 NXT2Q9NPJ8 142 aaKnown RBP9.74□□□□□ -0.85
LIMS3-205ENST00000487150 G0S2P27469 103 aa9.73□□□□□ -0.85
LIMS3-205ENST00000487150 Q8N814 137 aa9.73□□□□□ -0.85
LIMS3-205ENST00000487150 TIMM21Q9BVV7 248 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 211.4 ms