RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 RNF183Q96D59 192 aa5.04□□□□□ -1.6
SF3A3-206ENST00000487062 ZNF479Q96JC4 524 aa5.04□□□□□ -1.6
SF3A3-206ENST00000487062 C18orf15Q96N68 181 aa5.04□□□□□ -1.6
SF3A3-206ENST00000487062 SCGB3A1Q96QR1 104 aa5.04□□□□□ -1.6
SF3A3-206ENST00000487062 PRO1933Q9H354 126 aa5.04□□□□□ -1.6
SF3A3-206ENST00000487062 FAM30AQ9NZY2 134 aa5.04□□□□□ -1.6
SF3A3-206ENST00000487062 FBN1P35555 2871 aaKnown RBP5.04□□□□□ -1.6
SF3A3-206ENST00000487062 TRBV6-4A0A1B0GX49 114 aa5.03□□□□□ -1.6
SF3A3-206ENST00000487062 HSBP1L1C9JCN9 74 aa5.03□□□□□ -1.6
SF3A3-206ENST00000487062 P0DMU3 169 aa5.03□□□□□ -1.6
SF3A3-206ENST00000487062 FAM231AP0DMU4 169 aa5.03□□□□□ -1.6
SF3A3-206ENST00000487062 FAM231CP0DMU5 169 aa5.03□□□□□ -1.6
SF3A3-206ENST00000487062 RIPPLY3P57055 190 aa5.03□□□□□ -1.6
SF3A3-206ENST00000487062 XP32Q5T750 250 aa5.03□□□□□ -1.6
SF3A3-206ENST00000487062 Q6ZSN1 163 aa5.03□□□□□ -1.6
SF3A3-206ENST00000487062 NEGR1Q7Z3B1 354 aa5.03□□□□□ -1.6
SF3A3-206ENST00000487062 LINC00612Q8N6U2 182 aa5.03□□□□□ -1.6
SF3A3-206ENST00000487062 TP53TG1Q9Y2A0 90 aa5.03□□□□□ -1.6
SF3A3-206ENST00000487062 TRBV7-3A0A075B6L6 115 aa5.02□□□□□ -1.61
SF3A3-206ENST00000487062 TRAV9-2A0A087WT02 112 aa5.02□□□□□ -1.61
SF3A3-206ENST00000487062 IGHV4-28A0A0C4DH34 117 aa5.02□□□□□ -1.61
SF3A3-206ENST00000487062 TEX48A0A1B0GUV7 120 aa5.02□□□□□ -1.61
SF3A3-206ENST00000487062 G3V4G9 280 aa5.02□□□□□ -1.61
SF3A3-206ENST00000487062 TSHBP01222 138 aa5.02□□□□□ -1.61
SF3A3-206ENST00000487062 DEFB130BP0DP73 79 aa5.02□□□□□ -1.61
SF3A3-206ENST00000487062 DEFB130AP0DP74 79 aa5.02□□□□□ -1.61
SF3A3-206ENST00000487062 COTL1Q14019 142 aa5.02□□□□□ -1.61
SF3A3-206ENST00000487062 SPATA45Q537H7 98 aa5.02□□□□□ -1.61
SF3A3-206ENST00000487062 ERASQ7Z444 233 aa5.02□□□□□ -1.61
SF3A3-206ENST00000487062 ZNRF2Q8NHG8 242 aa5.02□□□□□ -1.61
SF3A3-206ENST00000487062 TMEM141Q96I45 108 aa5.02□□□□□ -1.61
SF3A3-206ENST00000487062 PRADC1Q9BSG0 188 aa5.02□□□□□ -1.61
SF3A3-206ENST00000487062 PAM16Q9Y3D7 125 aa5.02□□□□□ -1.61
SF3A3-206ENST00000487062 TRAV12-1A0A0B4J245 112 aa5.01□□□□□ -1.61
SF3A3-206ENST00000487062 SPART-AS1P0CW21 52 aa5.01□□□□□ -1.61
SF3A3-206ENST00000487062 DAD1P61803 113 aa5.01□□□□□ -1.61
SF3A3-206ENST00000487062 SMAGPQ0VAQ4 97 aa5.01□□□□□ -1.61
SF3A3-206ENST00000487062 GAGE1Q13065 139 aa5.01□□□□□ -1.61
SF3A3-206ENST00000487062 GAGE13Q4V321 117 aa5.01□□□□□ -1.61
SF3A3-206ENST00000487062 FAM222AQ5U5X8 452 aa5.01□□□□□ -1.61
SF3A3-206ENST00000487062 DAZ4Q86SG3 579 aaKnown RBP5.01□□□□□ -1.61
SF3A3-206ENST00000487062 ATOH7Q8N100 152 aa5.01□□□□□ -1.61
SF3A3-206ENST00000487062 SLC25A29Q8N8R3 303 aa5.01□□□□□ -1.61
SF3A3-206ENST00000487062 C20orf203Q8NBC4 194 aa5.01□□□□□ -1.61
SF3A3-206ENST00000487062 TIMM17AQ99595 171 aa5.01□□□□□ -1.61
SF3A3-206ENST00000487062 DAZ3Q9NR90 486 aaKnown RBP5.01□□□□□ -1.61
SF3A3-206ENST00000487062 NOTCH3Q9UM47 2321 aa5.01□□□□□ -1.61
SF3A3-206ENST00000487062 A0A087WX48 190 aa5□□□□□ -1.61
SF3A3-206ENST00000487062 GAGE12JA6NER3 117 aa5□□□□□ -1.61
SF3A3-206ENST00000487062 KRTAP9-1A8MXZ3 250 aaPredicted RBP5□□□□□ -1.61
SF3A3-206ENST00000487062 DPM2O94777 84 aa5□□□□□ -1.61
SF3A3-206ENST00000487062 GAGE4Q13068 117 aa5□□□□□ -1.61
SF3A3-206ENST00000487062 GAGE5Q13069 117 aa5□□□□□ -1.61
SF3A3-206ENST00000487062 FHL2Q14192 279 aa5□□□□□ -1.61
SF3A3-206ENST00000487062 TMEM97Q5BJF2 176 aa5□□□□□ -1.61
SF3A3-206ENST00000487062 PAPPA-AS1Q5QFB9 102 aa5□□□□□ -1.61
SF3A3-206ENST00000487062 Q8NAQ8 132 aa5□□□□□ -1.61
SF3A3-206ENST00000487062 PHLDA1Q8WV24 401 aaPredicted RBP5□□□□□ -1.61
SF3A3-206ENST00000487062 MIEN1Q9BRT3 115 aa5□□□□□ -1.61
SF3A3-206ENST00000487062 DKK2Q9UBU2 259 aa5□□□□□ -1.61
SF3A3-206ENST00000487062 HHLA3Q9XRX5 114 aa5□□□□□ -1.61
SF3A3-206ENST00000487062 IGIPA6NJ69 53 aa4.99□□□□□ -1.61
SF3A3-206ENST00000487062 F8VRH5 84 aa4.99□□□□□ -1.61
SF3A3-206ENST00000487062 IGKCP01834 107 aa4.99□□□□□ -1.61
SF3A3-206ENST00000487062 ATP5G1P05496 136 aa4.99□□□□□ -1.61
SF3A3-206ENST00000487062 NPSP0C0P6 89 aa4.99□□□□□ -1.61
SF3A3-206ENST00000487062 PLNP26678 52 aa4.99□□□□□ -1.61
SF3A3-206ENST00000487062 UBE2D3P61077 147 aa4.99□□□□□ -1.61
SF3A3-206ENST00000487062 UBE2D2P62837 147 aa4.99□□□□□ -1.61
SF3A3-206ENST00000487062 RPL39P62891 51 aaKnown RBP4.99□□□□□ -1.61
SF3A3-206ENST00000487062 PMVKQ15126 192 aa4.99□□□□□ -1.61
SF3A3-206ENST00000487062 DGAT2L7PQ6IED9 249 aa4.99□□□□□ -1.61
SF3A3-206ENST00000487062 DEFB104AQ8WTQ1 72 aa4.99□□□□□ -1.61
SF3A3-206ENST00000487062 BAALCQ8WXS3 180 aa4.99□□□□□ -1.61
SF3A3-206ENST00000487062 PMCHL2Q9BQD1 86 aa4.99□□□□□ -1.61
SF3A3-206ENST00000487062 KRTAP9-2Q9BYQ4 174 aa4.99□□□□□ -1.61
SF3A3-206ENST00000487062 PRO0255Q9UI72 69 aa4.99□□□□□ -1.61
SF3A3-206ENST00000487062 CHTOPQ9Y3Y2 248 aaKnown RBP4.99□□□□□ -1.61
SF3A3-206ENST00000487062 PYGO1Q9Y3Y4 419 aa4.99□□□□□ -1.61
SF3A3-206ENST00000487062 MAST4O15021 2626 aa4.99□□□□□ -1.61
SF3A3-206ENST00000487062 STAB1Q9NY15 2570 aa4.99□□□□□ -1.61
SF3A3-206ENST00000487062 IGHV3-38A0A0C4DH36 116 aa4.98□□□□□ -1.61
SF3A3-206ENST00000487062 hDV102S1A0JD36 115 aa4.98□□□□□ -1.61
SF3A3-206ENST00000487062 DEFB4AO15263 64 aa4.98□□□□□ -1.61
SF3A3-206ENST00000487062 CRYBA4P53673 196 aa4.98□□□□□ -1.61
SF3A3-206ENST00000487062 CHCHD7Q9BUK0 85 aa4.98□□□□□ -1.61
SF3A3-206ENST00000487062 SNHG12Q9BXW3 62 aa4.98□□□□□ -1.61
SF3A3-206ENST00000487062 GTSF1LQ9H1H1 148 aa4.98□□□□□ -1.61
SF3A3-206ENST00000487062 SPANXA1Q9NS26 97 aa4.98□□□□□ -1.61
SF3A3-206ENST00000487062 UQCR10Q9UDW1 63 aa4.98□□□□□ -1.61
SF3A3-206ENST00000487062 Q9UF83 564 aa4.98□□□□□ -1.61
SF3A3-206ENST00000487062 CBY1Q9Y3M2 126 aa4.98□□□□□ -1.61
SF3A3-206ENST00000487062 B5MCH6 92 aa4.97□□□□□ -1.61
SF3A3-206ENST00000487062 UBE2L6O14933 153 aa4.97□□□□□ -1.61
SF3A3-206ENST00000487062 PAX4O43316 350 aa4.97□□□□□ -1.61
SF3A3-206ENST00000487062 IGLC3P0DOY3 106 aa4.97□□□□□ -1.61
SF3A3-206ENST00000487062 MAJINQ3KP22 176 aa4.97□□□□□ -1.61
SF3A3-206ENST00000487062 COL5A1-AS1Q5SY13 56 aa4.97□□□□□ -1.61
SF3A3-206ENST00000487062 KPRPQ5T749 579 aaPredicted RBP4.97□□□□□ -1.61
SF3A3-206ENST00000487062 TIMM21Q9BVV7 248 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms