RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 SMLR1H3BR10 107 aa12.59□□□□□ -0.39
PHF1-208ENST00000486845 IGLC6P0CF74 106 aa12.59□□□□□ -0.39
PHF1-208ENST00000486845 RPS20P60866 119 aaKnown RBP12.59□□□□□ -0.39
PHF1-208ENST00000486845 G3V3Q6 166 aa12.58□□□□□ -0.4
PHF1-208ENST00000486845 RPL35P42766 123 aaKnown RBP12.58□□□□□ -0.4
PHF1-208ENST00000486845 AMTP48728 403 aa12.58□□□□□ -0.4
PHF1-208ENST00000486845 PRSS3P2Q8NHM4 247 aa12.58□□□□□ -0.4
PHF1-208ENST00000486845 NIT2Q9NQR4 276 aa12.58□□□□□ -0.4
PHF1-208ENST00000486845 IGKV2-24A0A0C4DH68 120 aa12.57□□□□□ -0.4
PHF1-208ENST00000486845 UMAD1C9J7I0 102 aa12.57□□□□□ -0.4
PHF1-208ENST00000486845 COTL1Q14019 142 aa12.57□□□□□ -0.4
PHF1-208ENST00000486845 AKAP14Q86UN6 197 aa12.57□□□□□ -0.4
PHF1-208ENST00000486845 KCNRGQ8N5I3 272 aa12.57□□□□□ -0.4
PHF1-208ENST00000486845 A0A0J9YXV3 536 aa12.56□□□□□ -0.4
PHF1-208ENST00000486845 TRGC1P0CF51 173 aa12.56□□□□□ -0.4
PHF1-208ENST00000486845 HIGD2BQ4VC39 106 aa12.56□□□□□ -0.4
PHF1-208ENST00000486845 STPG4Q8N801 248 aa12.56□□□□□ -0.4
PHF1-208ENST00000486845 OR2D3Q8NGH3 330 aa12.56□□□□□ -0.4
PHF1-208ENST00000486845 IGKV3OR2-268A0A0C4DH90 116 aa12.54□□□□□ -0.4
PHF1-208ENST00000486845 F2Z2F3 143 aa12.54□□□□□ -0.4
PHF1-208ENST00000486845 ODF1Q14990 250 aa12.54□□□□□ -0.4
PHF1-208ENST00000486845 REG3GQ6UW15 175 aa12.54□□□□□ -0.4
PHF1-208ENST00000486845 TCTE3Q8IZS6 198 aa12.54□□□□□ -0.4
PHF1-208ENST00000486845 LYPD6BQ8NI32 183 aa12.54□□□□□ -0.4
PHF1-208ENST00000486845 GVQW2A0A096LPI5 108 aaPredicted RBP12.53□□□□□ -0.4
PHF1-208ENST00000486845 XKRY2A2RUG3 117 aa12.53□□□□□ -0.4
PHF1-208ENST00000486845 H2AFB1P0C5Y9 115 aa12.53□□□□□ -0.4
PHF1-208ENST00000486845 CENPWQ5EE01 88 aa12.53□□□□□ -0.4
PHF1-208ENST00000486845 SPINK6Q6UWN8 80 aa12.53□□□□□ -0.4
PHF1-208ENST00000486845 C11orf52Q96A22 123 aa12.53□□□□□ -0.4
PHF1-208ENST00000486845 KRTAP10-8P60410 259 aa12.52□□□□□ -0.41
PHF1-208ENST00000486845 CHCHD10Q8WYQ3 142 aaPredicted RBP12.52□□□□□ -0.41
PHF1-208ENST00000486845 PKIGQ9Y2B9 76 aa12.52□□□□□ -0.41
PHF1-208ENST00000486845 A0A096LNI7 61 aa12.51□□□□□ -0.41
PHF1-208ENST00000486845 C19orf71A6NCJ1 209 aa12.51□□□□□ -0.41
PHF1-208ENST00000486845 AMMECR1LQ6DCA0 310 aa12.51□□□□□ -0.41
PHF1-208ENST00000486845 LINC00474Q9P2X8 69 aa12.51□□□□□ -0.41
PHF1-208ENST00000486845 ZNF345Q14585 488 aa12.5□□□□□ -0.41
PHF1-208ENST00000486845 LYZL1Q6UWQ5 148 aa12.5□□□□□ -0.41
PHF1-208ENST00000486845 MANBALQ9NQG1 85 aa12.5□□□□□ -0.41
PHF1-208ENST00000486845 IFNA1P01562 189 aa12.49□□□□□ -0.41
PHF1-208ENST00000486845 NTF3P20783 257 aa12.49□□□□□ -0.41
PHF1-208ENST00000486845 SMIM12Q96EX1 92 aa12.49□□□□□ -0.41
PHF1-208ENST00000486845 GNG13Q9P2W3 67 aa12.48□□□□□ -0.41
PHF1-208ENST00000486845 HMSDA8MTL9 139 aa12.47□□□□□ -0.41
PHF1-208ENST00000486845 GNG4P50150 75 aa12.47□□□□□ -0.41
PHF1-208ENST00000486845 RNASEKQ6P5S7 137 aaKnown RBP12.47□□□□□ -0.41
PHF1-208ENST00000486845 H7C423 109 aa12.46□□□□□ -0.41
PHF1-208ENST00000486845 NCR2O95944 276 aa12.46□□□□□ -0.41
PHF1-208ENST00000486845 CCL20P78556 96 aa12.46□□□□□ -0.41
PHF1-208ENST00000486845 FOXI1Q12951 378 aa12.46□□□□□ -0.41
PHF1-208ENST00000486845 CTRLP40313 264 aa12.45□□□□□ -0.42
PHF1-208ENST00000486845 Q6ZRP5 223 aa12.45□□□□□ -0.42
PHF1-208ENST00000486845 C9orf62Q8N4C0 152 aa12.45□□□□□ -0.42
PHF1-208ENST00000486845 GATD1Q8NB37 220 aa12.45□□□□□ -0.42
PHF1-208ENST00000486845 BIN3Q9NQY0 253 aa12.45□□□□□ -0.42
PHF1-208ENST00000486845 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.44□□□□□ -0.42
PHF1-208ENST00000486845 KANTRA0A1W2PQU2 76 aa12.44□□□□□ -0.42
PHF1-208ENST00000486845 IGKV2-29A2NJV5 120 aaPredicted RBP12.44□□□□□ -0.42
PHF1-208ENST00000486845 RAB19A4D1S5 217 aa12.44□□□□□ -0.42
PHF1-208ENST00000486845 BCL2L11O43521 198 aa12.44□□□□□ -0.42
PHF1-208ENST00000486845 FGF6P10767 208 aa12.44□□□□□ -0.42
PHF1-208ENST00000486845 EIF5AP63241 154 aaKnown RBP12.44□□□□□ -0.42
PHF1-208ENST00000486845 SRSF9Q13242 221 aaKnown RBP eCLIP12.44□□□□□ -0.42
PHF1-208ENST00000486845 TWIST1Q15672 202 aa12.44□□□□□ -0.42
PHF1-208ENST00000486845 CARD19Q96LW7 228 aa12.44□□□□□ -0.42
PHF1-208ENST00000486845 TRAV26-2A0A0B4J265 109 aa12.43□□□□□ -0.42
PHF1-208ENST00000486845 APCSP02743 223 aa12.43□□□□□ -0.42
PHF1-208ENST00000486845 IGHV1-58A0A0C4DH39 117 aa12.42□□□□□ -0.42
PHF1-208ENST00000486845 GAS8-AS1O95177 125 aa12.42□□□□□ -0.42
PHF1-208ENST00000486845 ZNF25P17030 456 aaPredicted RBP12.42□□□□□ -0.42
PHF1-208ENST00000486845 XCL1P47992 114 aa12.42□□□□□ -0.42
PHF1-208ENST00000486845 OR5A1Q8NGJ0 315 aa12.42□□□□□ -0.42
PHF1-208ENST00000486845 CNFNQ9BYD5 112 aa12.42□□□□□ -0.42
PHF1-208ENST00000486845 TRAV1-1A0A0B4J248 108 aa12.41□□□□□ -0.42
PHF1-208ENST00000486845 RPL39LQ96EH5 51 aaKnown RBP12.41□□□□□ -0.42
PHF1-208ENST00000486845 TRBV20OR9-2A0A075B6H5 130 aa12.4□□□□□ -0.42
PHF1-208ENST00000486845 PDE6DO43924 150 aa12.4□□□□□ -0.42
PHF1-208ENST00000486845 TMEM101Q96IK0 257 aa12.4□□□□□ -0.42
PHF1-208ENST00000486845 BTF3L4Q96K17 158 aa12.4□□□□□ -0.42
PHF1-208ENST00000486845 TEX46H3BTG2 121 aa12.39□□□□□ -0.43
PHF1-208ENST00000486845 CCL25O15444 150 aa12.39□□□□□ -0.43
PHF1-208ENST00000486845 MEF2BQ02080 365 aaPredicted RBP12.39□□□□□ -0.43
PHF1-208ENST00000486845 SMIM15Q7Z3B0 74 aa12.39□□□□□ -0.43
PHF1-208ENST00000486845 NUDT10Q8NFP7 164 aa12.39□□□□□ -0.43
PHF1-208ENST00000486845 LINC00526Q96FQ7 95 aa12.39□□□□□ -0.43
PHF1-208ENST00000486845 NUDT11Q96G61 164 aa12.39□□□□□ -0.43
PHF1-208ENST00000486845 LINC00959A0A1B0GUT2 108 aa12.38□□□□□ -0.43
PHF1-208ENST00000486845 SDHAF1A6NFY7 115 aa12.38□□□□□ -0.43
PHF1-208ENST00000486845 SYCNQ0VAF6 134 aa12.38□□□□□ -0.43
PHF1-208ENST00000486845 TEX261Q6UWH6 196 aa12.38□□□□□ -0.43
PHF1-208ENST00000486845 MED9Q9NWA0 146 aa12.38□□□□□ -0.43
PHF1-208ENST00000486845 ZNF561-AS1K7EIQ3 104 aa12.37□□□□□ -0.43
PHF1-208ENST00000486845 RPP21Q9H633 154 aaKnown RBP12.37□□□□□ -0.43
PHF1-208ENST00000486845 PTTG1IPP53801 180 aa12.36□□□□□ -0.43
PHF1-208ENST00000486845 I3L3M4 83 aa12.35□□□□□ -0.43
PHF1-208ENST00000486845 PMCHP20382 165 aa12.35□□□□□ -0.43
PHF1-208ENST00000486845 SS18Q15532 418 aa12.35□□□□□ -0.43
PHF1-208ENST00000486845 LOC107984640A0A0U1RRK4 108 aa12.34□□□□□ -0.43
PHF1-208ENST00000486845 FAM231BA6NCW3 169 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms