RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 C11orf86A6NJI1 115 aa8.58□□□□□ -1.04
PKP4-213ENST00000486254 K7EQD1 137 aa8.58□□□□□ -1.04
PKP4-213ENST00000486254 Q6ZSN1 163 aa8.58□□□□□ -1.04
PKP4-213ENST00000486254 TIMM21Q9BVV7 248 aa8.58□□□□□ -1.04
PKP4-213ENST00000486254 TRBV7-3A0A075B6L6 115 aa8.57□□□□□ -1.04
PKP4-213ENST00000486254 IGHV3-73A0A0B4J1V6 119 aa8.57□□□□□ -1.04
PKP4-213ENST00000486254 RPL35AP18077 110 aaKnown RBP8.57□□□□□ -1.04
PKP4-213ENST00000486254 HERVK_113P61574 105 aa8.57□□□□□ -1.04
PKP4-213ENST00000486254 COTL1Q14019 142 aa8.57□□□□□ -1.04
PKP4-213ENST00000486254 TAL2Q16559 108 aa8.57□□□□□ -1.04
PKP4-213ENST00000486254 Q6ZTI0 123 aa8.57□□□□□ -1.04
PKP4-213ENST00000486254 LINC00612Q8N6U2 182 aa8.57□□□□□ -1.04
PKP4-213ENST00000486254 OR11H2Q8NH07 326 aa8.57□□□□□ -1.04
PKP4-213ENST00000486254 AMELXQ99217 191 aa8.57□□□□□ -1.04
PKP4-213ENST00000486254 TP73-AS1Q9UF72 201 aa8.57□□□□□ -1.04
PKP4-213ENST00000486254 IGLV4-3A0A075B6K6 122 aa8.56□□□□□ -1.04
PKP4-213ENST00000486254 TRBV6-4A0A1B0GX49 114 aa8.56□□□□□ -1.04
PKP4-213ENST00000486254 RPL36AP83881 106 aaKnown RBP8.56□□□□□ -1.04
PKP4-213ENST00000486254 GAGE1Q13065 139 aa8.56□□□□□ -1.04
PKP4-213ENST00000486254 DAZ4Q86SG3 579 aaKnown RBP8.56□□□□□ -1.04
PKP4-213ENST00000486254 RPL36ALQ969Q0 106 aaKnown RBP8.56□□□□□ -1.04
PKP4-213ENST00000486254 CHCHD7Q9BUK0 85 aa8.56□□□□□ -1.04
PKP4-213ENST00000486254 DAZ3Q9NR90 486 aaKnown RBP8.56□□□□□ -1.04
PKP4-213ENST00000486254 NOTCH3Q9UM47 2321 aa8.56□□□□□ -1.04
PKP4-213ENST00000486254 TRBV25-1A0A075B6N4 114 aa8.56□□□□□ -1.04
PKP4-213ENST00000486254 MRPS36P82909 103 aaKnown RBP8.56□□□□□ -1.04
PKP4-213ENST00000486254 SMAGPQ0VAQ4 97 aa8.56□□□□□ -1.04
PKP4-213ENST00000486254 ORAOV1Q8WV07 137 aa8.56□□□□□ -1.04
PKP4-213ENST00000486254 NOP10Q9NPE3 64 aaKnown RBP8.56□□□□□ -1.04
PKP4-213ENST00000486254 ZNF479Q96JC4 524 aa8.55□□□□□ -1.04
PKP4-213ENST00000486254 CSDC2Q9Y534 153 aaKnown RBP8.55□□□□□ -1.04
PKP4-213ENST00000486254 A6NDN8 102 aa8.54□□□□□ -1.04
PKP4-213ENST00000486254 UBE2D3P61077 147 aa8.54□□□□□ -1.04
PKP4-213ENST00000486254 UBE2D2P62837 147 aa8.54□□□□□ -1.04
PKP4-213ENST00000486254 GTSF1LQ9H1H1 148 aa8.54□□□□□ -1.04
PKP4-213ENST00000486254 VCX2Q9H322 139 aa8.54□□□□□ -1.04
PKP4-213ENST00000486254 UBE2D4Q9Y2X8 147 aa8.54□□□□□ -1.04
PKP4-213ENST00000486254 COX11Q9Y6N1 276 aa8.54□□□□□ -1.04
PKP4-213ENST00000486254 MYMXA0A1B0GTQ4 84 aa8.53□□□□□ -1.04
PKP4-213ENST00000486254 APOC4P55056 127 aa8.53□□□□□ -1.04
PKP4-213ENST00000486254 PRADC1Q9BSG0 188 aa8.53□□□□□ -1.04
PKP4-213ENST00000486254 CHAC1Q9BUX1 264 aa8.53□□□□□ -1.04
PKP4-213ENST00000486254 ZMAT5Q9UDW3 170 aaKnown RBP8.53□□□□□ -1.04
PKP4-213ENST00000486254 H7C423 109 aa8.52□□□□□ -1.04
PKP4-213ENST00000486254 SLC25A29Q8N8R3 303 aa8.52□□□□□ -1.04
PKP4-213ENST00000486254 FAM104AQ969W3 186 aa8.52□□□□□ -1.04
PKP4-213ENST00000486254 TM2D2Q9BX73 214 aa8.52□□□□□ -1.04
PKP4-213ENST00000486254 TRGV2A0A075B6R0 118 aa8.52□□□□□ -1.05
PKP4-213ENST00000486254 TRAV8-6A0A0B4J262 113 aa8.52□□□□□ -1.05
PKP4-213ENST00000486254 LINC00694P0DN24 101 aa8.52□□□□□ -1.05
PKP4-213ENST00000486254 LINC00469Q8N7U9 141 aa8.52□□□□□ -1.05
PKP4-213ENST00000486254 ZNRF2Q8NHG8 242 aa8.52□□□□□ -1.05
PKP4-213ENST00000486254 Q9UF83 564 aa8.52□□□□□ -1.05
PKP4-213ENST00000486254 TEP1Q99973 2627 aaKnown RBP8.51□□□□□ -1.05
PKP4-213ENST00000486254 FLNBO75369 2602 aaKnown RBP8.51□□□□□ -1.05
PKP4-213ENST00000486254 ATRQ13535 2644 aa8.51□□□□□ -1.05
PKP4-213ENST00000486254 LYRM9A8MSI8 78 aa8.51□□□□□ -1.05
PKP4-213ENST00000486254 FAM19A3Q7Z5A8 133 aa8.51□□□□□ -1.05
PKP4-213ENST00000486254 X6R8D5 127 aa8.51□□□□□ -1.05
PKP4-213ENST00000486254 TINCRA0A1B0GVN0 87 aa8.5□□□□□ -1.05
PKP4-213ENST00000486254 TMEM223A0PJW6 202 aa8.5□□□□□ -1.05
PKP4-213ENST00000486254 GAGE12BA1L429 117 aa8.5□□□□□ -1.05
PKP4-213ENST00000486254 TAX1BP3O14907 124 aa8.5□□□□□ -1.05
PKP4-213ENST00000486254 GAGE7O76087 117 aa8.5□□□□□ -1.05
PKP4-213ENST00000486254 GAGE12FP0CL80 117 aa8.5□□□□□ -1.05
PKP4-213ENST00000486254 GAGE12GP0CL81 117 aa8.5□□□□□ -1.05
PKP4-213ENST00000486254 GAGE12IP0CL82 117 aa8.5□□□□□ -1.05
PKP4-213ENST00000486254 SBSPONQ8IVN8 264 aa8.5□□□□□ -1.05
PKP4-213ENST00000486254 MAPKAPK5-AS1Q8N8E1 139 aa8.5□□□□□ -1.05
PKP4-213ENST00000486254 NIPBLQ6KC79 2804 aaeCLIP8.5□□□□□ -1.05
PKP4-213ENST00000486254 H3BRM9 83 aa8.49□□□□□ -1.05
PKP4-213ENST00000486254 ZNF22P17026 224 aaPredicted RBP8.49□□□□□ -1.05
PKP4-213ENST00000486254 ZNF25P17030 456 aaPredicted RBP8.49□□□□□ -1.05
PKP4-213ENST00000486254 TCTAP57738 103 aa8.49□□□□□ -1.05
PKP4-213ENST00000486254 TMEM170BQ5T4T1 132 aa8.49□□□□□ -1.05
PKP4-213ENST00000486254 SPATA3Q8NHX4 192 aa8.49□□□□□ -1.05
PKP4-213ENST00000486254 TTTY13Q9BZ97 58 aa8.49□□□□□ -1.05
PKP4-213ENST00000486254 IGLV5-45A0A087WSX0 123 aa8.48□□□□□ -1.05
PKP4-213ENST00000486254 LEPROTO15243 131 aa8.48□□□□□ -1.05
PKP4-213ENST00000486254 FHL2Q14192 279 aa8.48□□□□□ -1.05
PKP4-213ENST00000486254 CEND1Q8N111 149 aa8.48□□□□□ -1.05
PKP4-213ENST00000486254 PLEKHB2Q96CS7 222 aa8.48□□□□□ -1.05
PKP4-213ENST00000486254 OPRPNQ99935 248 aaPredicted RBP8.48□□□□□ -1.05
PKP4-213ENST00000486254 TRGV4A0A0C4DH28 118 aa8.48□□□□□ -1.05
PKP4-213ENST00000486254 ZNF815PA8K554 130 aa8.48□□□□□ -1.05
PKP4-213ENST00000486254 TIRAPP58753 221 aa8.48□□□□□ -1.05
PKP4-213ENST00000486254 PHLDA1Q8WV24 401 aaPredicted RBP8.48□□□□□ -1.05
PKP4-213ENST00000486254 SPANXB1Q9NS25 103 aaPredicted RBP8.48□□□□□ -1.05
PKP4-213ENST00000486254 J3QQQ9 107 aa8.47□□□□□ -1.05
PKP4-213ENST00000486254 DEFB104AQ8WTQ1 72 aa8.47□□□□□ -1.05
PKP4-213ENST00000486254 TENM1Q9UKZ4 2725 aa8.46□□□□□ -1.05
PKP4-213ENST00000486254 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.46□□□□□ -1.06
PKP4-213ENST00000486254 IGHV3-38A0A0C4DH36 116 aa8.46□□□□□ -1.06
PKP4-213ENST00000486254 A0A0J9YXV3 536 aa8.46□□□□□ -1.06
PKP4-213ENST00000486254 IGKV2-29A2NJV5 120 aaPredicted RBP8.46□□□□□ -1.06
PKP4-213ENST00000486254 A8MZ25 164 aa8.46□□□□□ -1.06
PKP4-213ENST00000486254 MIFP14174 115 aa8.46□□□□□ -1.06
PKP4-213ENST00000486254 UBE2D1P51668 147 aa8.46□□□□□ -1.06
PKP4-213ENST00000486254 NTM-AS1Q6ZSK4 140 aa8.46□□□□□ -1.06
PKP4-213ENST00000486254 Q6ZUT4 128 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms