RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 SLURP1P55000 103 aa12.87□□□□□ -0.35
TNXB-205ENST00000486148 CREBBPQ92793 2442 aa12.87□□□□□ -0.35
TNXB-205ENST00000486148 CENPEQ02224 2701 aa12.87□□□□□ -0.35
TNXB-205ENST00000486148 C9JAW5 83 aa12.87□□□□□ -0.35
TNXB-205ENST00000486148 C10orf126Q8N4M7 172 aa12.87□□□□□ -0.35
TNXB-205ENST00000486148 C20orf203Q8NBC4 194 aa12.87□□□□□ -0.35
TNXB-205ENST00000486148 ACACBO00763 2458 aa12.87□□□□□ -0.35
TNXB-205ENST00000486148 FSHBP01225 129 aa12.86□□□□□ -0.35
TNXB-205ENST00000486148 SCGB1C2P0DMR2 95 aa12.86□□□□□ -0.35
TNXB-205ENST00000486148 TTC32Q5I0X7 151 aa12.86□□□□□ -0.35
TNXB-205ENST00000486148 RNF152Q8N8N0 203 aa12.86□□□□□ -0.35
TNXB-205ENST00000486148 TRGV11A0A075B6L2 103 aa12.86□□□□□ -0.35
TNXB-205ENST00000486148 PRM2P04554 102 aa12.86□□□□□ -0.35
TNXB-205ENST00000486148 IGHV3-73A0A0B4J1V6 119 aa12.85□□□□□ -0.35
TNXB-205ENST00000486148 I3L3M4 83 aa12.85□□□□□ -0.35
TNXB-205ENST00000486148 J3QQQ9 107 aa12.85□□□□□ -0.35
TNXB-205ENST00000486148 IGHV3-30P01768 117 aa12.85□□□□□ -0.35
TNXB-205ENST00000486148 IGHV3-30-5P0DP03 117 aa12.85□□□□□ -0.35
TNXB-205ENST00000486148 PROK1P58294 105 aa12.85□□□□□ -0.35
TNXB-205ENST00000486148 DEFB131AP59861 70 aa12.85□□□□□ -0.35
TNXB-205ENST00000486148 SLC25A29Q8N8R3 303 aa12.85□□□□□ -0.35
TNXB-205ENST00000486148 RAX2Q96IS3 184 aa12.85□□□□□ -0.35
TNXB-205ENST00000486148 TNFRSF18Q9Y5U5 241 aa12.85□□□□□ -0.35
TNXB-205ENST00000486148 FAM208BQ5VWN6 2430 aa12.84□□□□□ -0.35
TNXB-205ENST00000486148 PRB1P04280 392 aa12.84□□□□□ -0.35
TNXB-205ENST00000486148 IGHV4-31P0DP07 118 aa12.84□□□□□ -0.35
TNXB-205ENST00000486148 EIF4EBP3O60516 100 aaPredicted RBP12.84□□□□□ -0.35
TNXB-205ENST00000486148 IGLV4-3A0A075B6K6 122 aa12.83□□□□□ -0.36
TNXB-205ENST00000486148 RBMY1BA6NDE4 496 aaKnown RBP12.83□□□□□ -0.36
TNXB-205ENST00000486148 RBMY1EA6NEQ0 496 aaKnown RBP12.83□□□□□ -0.36
TNXB-205ENST00000486148 RBMY1DP0C7P1 496 aaKnown RBP12.83□□□□□ -0.36
TNXB-205ENST00000486148 NTN5Q8WTR8 489 aaPredicted RBP12.83□□□□□ -0.36
TNXB-205ENST00000486148 PRO1854Q9UHT4 67 aa12.83□□□□□ -0.36
TNXB-205ENST00000486148 TMEM223A0PJW6 202 aa12.83□□□□□ -0.36
TNXB-205ENST00000486148 LGALS3P17931 250 aaKnown RBP12.83□□□□□ -0.36
TNXB-205ENST00000486148 IGHV3-64A0A075B6Q5 118 aa12.82□□□□□ -0.36
TNXB-205ENST00000486148 Q6Q795 121 aa12.82□□□□□ -0.36
TNXB-205ENST00000486148 DUX3Q96PT4 197 aa12.82□□□□□ -0.36
TNXB-205ENST00000486148 CR1P17927 2039 aa12.82□□□□□ -0.36
TNXB-205ENST00000486148 A0A0J9YXV3 536 aa12.82□□□□□ -0.36
TNXB-205ENST00000486148 ZNF22P17026 224 aaPredicted RBP12.82□□□□□ -0.36
TNXB-205ENST00000486148 H3BMM0 161 aa12.81□□□□□ -0.36
TNXB-205ENST00000486148 M0QXV9 152 aa12.81□□□□□ -0.36
TNXB-205ENST00000486148 KRTAP10-9P60411 292 aa12.81□□□□□ -0.36
TNXB-205ENST00000486148 Q9UF83 564 aa12.81□□□□□ -0.36
TNXB-205ENST00000486148 ZFYVE26Q68DK2 2539 aa12.81□□□□□ -0.36
TNXB-205ENST00000486148 LEPROTO15243 131 aa12.8□□□□□ -0.36
TNXB-205ENST00000486148 HIST2H2BDQ6DRA6 164 aa12.8□□□□□ -0.36
TNXB-205ENST00000486148 FAM104AQ969W3 186 aa12.8□□□□□ -0.36
TNXB-205ENST00000486148 C15orf53Q8NAA6 179 aa12.8□□□□□ -0.36
TNXB-205ENST00000486148 LRRK2Q5S007 2527 aa12.8□□□□□ -0.36
TNXB-205ENST00000486148 TEX49A0A1B0GTD5 131 aa12.79□□□□□ -0.36
TNXB-205ENST00000486148 TMEM61Q8N0U2 210 aa12.79□□□□□ -0.36
TNXB-205ENST00000486148 ZNF462Q96JM2 2506 aa12.79□□□□□ -0.36
TNXB-205ENST00000486148 A8MTW9 85 aa12.79□□□□□ -0.36
TNXB-205ENST00000486148 PTPN13Q12923 2485 aa12.79□□□□□ -0.36
TNXB-205ENST00000486148 MEIG1Q5JSS6 88 aa12.78□□□□□ -0.36
TNXB-205ENST00000486148 CEMP1Q6PRD7 247 aaPredicted RBP12.78□□□□□ -0.36
TNXB-205ENST00000486148 TEX15Q9BXT5 2789 aa12.78□□□□□ -0.36
TNXB-205ENST00000486148 Q6ZSN1 163 aa12.78□□□□□ -0.36
TNXB-205ENST00000486148 EDA2RQ9HAV5 297 aa12.78□□□□□ -0.36
TNXB-205ENST00000486148 NACAE9PAV3 2078 aa12.78□□□□□ -0.36
TNXB-205ENST00000486148 H7C2G1 150 aa12.77□□□□□ -0.36
TNXB-205ENST00000486148 IGHV3-33P01772 117 aa12.77□□□□□ -0.36
TNXB-205ENST00000486148 C3orf56Q8N813 242 aa12.77□□□□□ -0.36
TNXB-205ENST00000486148 A4D1N5 150 aa12.76□□□□□ -0.37
TNXB-205ENST00000486148 CD28P10747 220 aa12.76□□□□□ -0.37
TNXB-205ENST00000486148 TRAV8-4A0A0B4J246 113 aa12.76□□□□□ -0.37
TNXB-205ENST00000486148 M0R2P5 195 aa12.76□□□□□ -0.37
TNXB-205ENST00000486148 RNASE13Q5GAN3 156 aaKnown RBP12.75□□□□□ -0.37
TNXB-205ENST00000486148 Q8N2B8 174 aa12.75□□□□□ -0.37
TNXB-205ENST00000486148 ABCA12Q86UK0 2595 aa12.75□□□□□ -0.37
TNXB-205ENST00000486148 KHDC1LQ5JSQ8 128 aa12.75□□□□□ -0.37
TNXB-205ENST00000486148 TMEM263Q8WUH6 116 aaKnown RBP12.75□□□□□ -0.37
TNXB-205ENST00000486148 PYGO1Q9Y3Y4 419 aa12.75□□□□□ -0.37
TNXB-205ENST00000486148 MAP6D1Q9H9H5 199 aa12.75□□□□□ -0.37
TNXB-205ENST00000486148 LINC01620Q4KN68 170 aa12.74□□□□□ -0.37
TNXB-205ENST00000486148 BBC3Q96PG8 261 aaPredicted RBP12.74□□□□□ -0.37
TNXB-205ENST00000486148 SPXQ9BT56 116 aa12.74□□□□□ -0.37
TNXB-205ENST00000486148 PPDPFQ9H3Y8 114 aa12.74□□□□□ -0.37
TNXB-205ENST00000486148 MYO9AB2RTY4 2548 aa12.74□□□□□ -0.37
TNXB-205ENST00000486148 TRAV2A0A0B4J234 112 aa12.74□□□□□ -0.37
TNXB-205ENST00000486148 NAV2Q8IVL1 2488 aa12.73□□□□□ -0.37
TNXB-205ENST00000486148 RPL13AP40429 203 aaKnown RBP12.73□□□□□ -0.37
TNXB-205ENST00000486148 ZNF415Q09FC8 603 aa12.73□□□□□ -0.37
TNXB-205ENST00000486148 PEMTQ9UBM1 199 aa12.73□□□□□ -0.37
TNXB-205ENST00000486148 USP24Q9UPU5 2620 aa12.73□□□□□ -0.37
TNXB-205ENST00000486148 PRRC2AP48634 2157 aaKnown RBP12.73□□□□□ -0.37
TNXB-205ENST00000486148 ADARB2-AS1A8MUL3 147 aa12.73□□□□□ -0.37
TNXB-205ENST00000486148 C4orf3Q8WVX3 66 aa12.73□□□□□ -0.37
TNXB-205ENST00000486148 IGHV3-30-3P0DP02 117 aa12.72□□□□□ -0.37
TNXB-205ENST00000486148 MRPS36P82909 103 aaKnown RBP12.72□□□□□ -0.37
TNXB-205ENST00000486148 MUSTN1Q8IVN3 82 aa12.72□□□□□ -0.37
TNXB-205ENST00000486148 C11orf72Q8NBR9 251 aa12.72□□□□□ -0.37
TNXB-205ENST00000486148 CHCHD5Q9BSY4 110 aa12.72□□□□□ -0.37
TNXB-205ENST00000486148 CHCHD7Q9BUK0 85 aa12.72□□□□□ -0.37
TNXB-205ENST00000486148 CUBNO60494 3623 aa12.72□□□□□ -0.37
TNXB-205ENST00000486148 TRAV8-3A0A0A6YYJ7 113 aa12.72□□□□□ -0.37
TNXB-205ENST00000486148 LINC01587Q99440 93 aa12.72□□□□□ -0.37
TNXB-205ENST00000486148 UBR5O95071 2799 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms