RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 FAM210AQ96ND0 272 aa12.03□□□□□ -0.48
PRPF40A-209ENST00000486100 CT83Q5H943 113 aa12.02□□□□□ -0.49
PRPF40A-209ENST00000486100 SMIM7Q9BQ49 75 aa12.02□□□□□ -0.49
PRPF40A-209ENST00000486100 USP17L23D6RBM5 183 aa12.01□□□□□ -0.49
PRPF40A-209ENST00000486100 HLA-DQA1P01909 254 aa12.01□□□□□ -0.49
PRPF40A-209ENST00000486100 COTL1Q14019 142 aa12.01□□□□□ -0.49
PRPF40A-209ENST00000486100 KRTAP26-1Q6PEX3 210 aa12.01□□□□□ -0.49
PRPF40A-209ENST00000486100 CLPSL2Q6UWE3 100 aa12.01□□□□□ -0.49
PRPF40A-209ENST00000486100 C20orf203Q8NBC4 194 aa12.01□□□□□ -0.49
PRPF40A-209ENST00000486100 DEFB104AQ8WTQ1 72 aa12.01□□□□□ -0.49
PRPF40A-209ENST00000486100 TRAV26-2A0A0B4J265 109 aa12□□□□□ -0.49
PRPF40A-209ENST00000486100 SRP19P09132 144 aaKnown RBP12□□□□□ -0.49
PRPF40A-209ENST00000486100 REG3AQ06141 175 aa12□□□□□ -0.49
PRPF40A-209ENST00000486100 LINC01551Q86U37 167 aa12□□□□□ -0.49
PRPF40A-209ENST00000486100 IGLV4-60A0A075B6I1 120 aa11.99□□□□□ -0.49
PRPF40A-209ENST00000486100 ZNF727A8MUV8 499 aa11.99□□□□□ -0.49
PRPF40A-209ENST00000486100 AMTP48728 403 aa11.99□□□□□ -0.49
PRPF40A-209ENST00000486100 TRAV8-4A0A0B4J246 113 aa11.98□□□□□ -0.49
PRPF40A-209ENST00000486100 LINC00862A6NCI5 91 aa11.98□□□□□ -0.49
PRPF40A-209ENST00000486100 UBE2L6O14933 153 aa11.98□□□□□ -0.49
PRPF40A-209ENST00000486100 PRSS1P07477 247 aa11.97□□□□□ -0.49
PRPF40A-209ENST00000486100 TSKUQ8WUA8 353 aa11.97□□□□□ -0.49
PRPF40A-209ENST00000486100 BORCS7Q96B45 105 aa11.97□□□□□ -0.49
PRPF40A-209ENST00000486100 RPL39LQ96EH5 51 aaKnown RBP11.97□□□□□ -0.49
PRPF40A-209ENST00000486100 GFRA4Q9GZZ7 299 aa11.97□□□□□ -0.49
PRPF40A-209ENST00000486100 OSTCQ9NRP0 149 aa11.97□□□□□ -0.49
PRPF40A-209ENST00000486100 IGLV10-54A0A075B6I4 117 aa11.96□□□□□ -0.49
PRPF40A-209ENST00000486100 FAM231BA6NCW3 169 aa11.96□□□□□ -0.49
PRPF40A-209ENST00000486100 PEA15Q15121 130 aa11.96□□□□□ -0.49
PRPF40A-209ENST00000486100 DGAT2L7PQ6IED9 249 aa11.96□□□□□ -0.49
PRPF40A-209ENST00000486100 UQCC3Q6UW78 93 aa11.96□□□□□ -0.49
PRPF40A-209ENST00000486100 CHAC1Q9BUX1 264 aa11.96□□□□□ -0.49
PRPF40A-209ENST00000486100 NCR2O95944 276 aa11.95□□□□□ -0.5
PRPF40A-209ENST00000486100 NDUFA5Q16718 116 aa11.95□□□□□ -0.5
PRPF40A-209ENST00000486100 SCXQ7RTU7 201 aa11.95□□□□□ -0.5
PRPF40A-209ENST00000486100 SRRM2Q9UQ35 2752 aaKnown RBP11.94□□□□□ -0.5
PRPF40A-209ENST00000486100 A0A1B0GUT8 65 aa11.94□□□□□ -0.5
PRPF40A-209ENST00000486100 SDHAF1A6NFY7 115 aa11.94□□□□□ -0.5
PRPF40A-209ENST00000486100 HIGD1CA8MV81 97 aa11.94□□□□□ -0.5
PRPF40A-209ENST00000486100 CLRN3Q8NCR9 226 aa11.94□□□□□ -0.5
PRPF40A-209ENST00000486100 PLA2G1BP04054 148 aaKnown RBP11.93□□□□□ -0.5
PRPF40A-209ENST00000486100 TMEM241Q24JQ0 296 aa11.93□□□□□ -0.5
PRPF40A-209ENST00000486100 FAM74A3Q4VXF1 159 aa11.93□□□□□ -0.5
PRPF40A-209ENST00000486100 LINC00528Q8N1L1 170 aa11.93□□□□□ -0.5
PRPF40A-209ENST00000486100 TMEM191AQ9H0A3 160 aa11.93□□□□□ -0.5
PRPF40A-209ENST00000486100 TRBV6-5A0A0K0K1A5 114 aa11.92□□□□□ -0.5
PRPF40A-209ENST00000486100 H7C423 109 aa11.92□□□□□ -0.5
PRPF40A-209ENST00000486100 C9orf163Q8N9P6 203 aa11.92□□□□□ -0.5
PRPF40A-209ENST00000486100 CIRBP-AS1Q8TBR5 109 aa11.92□□□□□ -0.5
PRPF40A-209ENST00000486100 V9GYV3 84 aa11.92□□□□□ -0.5
PRPF40A-209ENST00000486100 I3L3M4 83 aa11.91□□□□□ -0.5
PRPF40A-209ENST00000486100 APCSP02743 223 aa11.91□□□□□ -0.5
PRPF40A-209ENST00000486100 PMCHP20382 165 aa11.91□□□□□ -0.5
PRPF40A-209ENST00000486100 ISOC2Q96AB3 205 aa11.91□□□□□ -0.5
PRPF40A-209ENST00000486100 AMMECR1LQ6DCA0 310 aa11.9□□□□□ -0.5
PRPF40A-209ENST00000486100 COMMD7Q86VX2 200 aa11.9□□□□□ -0.5
PRPF40A-209ENST00000486100 RNF185Q96GF1 192 aa11.9□□□□□ -0.5
PRPF40A-209ENST00000486100 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.89□□□□□ -0.51
PRPF40A-209ENST00000486100 IGKV2-29A2NJV5 120 aaPredicted RBP11.89□□□□□ -0.51
PRPF40A-209ENST00000486100 C9JQL5 133 aa11.89□□□□□ -0.51
PRPF40A-209ENST00000486100 GAS8-AS1O95177 125 aa11.89□□□□□ -0.51
PRPF40A-209ENST00000486100 RAB4AP20338 218 aa11.89□□□□□ -0.51
PRPF40A-209ENST00000486100 RPL23P62829 140 aaKnown RBP11.89□□□□□ -0.51
PRPF40A-209ENST00000486100 RIGQ13278 110 aa11.89□□□□□ -0.51
PRPF40A-209ENST00000486100 NUP35Q8NFH5 326 aa11.89□□□□□ -0.51
PRPF40A-209ENST00000486100 ST20Q9HBF5 79 aa11.89□□□□□ -0.51
PRPF40A-209ENST00000486100 FGF6P10767 208 aa11.88□□□□□ -0.51
PRPF40A-209ENST00000486100 RNASEKQ6P5S7 137 aaKnown RBP11.88□□□□□ -0.51
PRPF40A-209ENST00000486100 MRAP2Q96G30 205 aa11.88□□□□□ -0.51
PRPF40A-209ENST00000486100 NAT8Q9UHE5 227 aa11.88□□□□□ -0.51
PRPF40A-209ENST00000486100 HERC1Q15751 4861 aa11.88□□□□□ -0.51
PRPF40A-209ENST00000486100 hDV102S1A0JD36 115 aa11.87□□□□□ -0.51
PRPF40A-209ENST00000486100 POLR2KP53803 58 aaKnown RBP11.87□□□□□ -0.51
PRPF40A-209ENST00000486100 CNBPP62633 177 aaKnown RBP11.87□□□□□ -0.51
PRPF40A-209ENST00000486100 SRSF3P84103 164 aaKnown RBP11.87□□□□□ -0.51
PRPF40A-209ENST00000486100 AMN1Q8IY45 258 aa11.87□□□□□ -0.51
PRPF40A-209ENST00000486100 MYCBP2O75592 4640 aa11.87□□□□□ -0.51
PRPF40A-209ENST00000486100 IGKV3OR2-268A0A0C4DH90 116 aa11.86□□□□□ -0.51
PRPF40A-209ENST00000486100 GAGE12HA6NDE8 117 aa11.86□□□□□ -0.51
PRPF40A-209ENST00000486100 ESDP10768 282 aa11.86□□□□□ -0.51
PRPF40A-209ENST00000486100 ADIRFQ15847 76 aa11.86□□□□□ -0.51
PRPF40A-209ENST00000486100 SDIM1Q6ZPB5 146 aa11.86□□□□□ -0.51
PRPF40A-209ENST00000486100 NAT8BQ9UHF3 227 aa11.86□□□□□ -0.51
PRPF40A-209ENST00000486100 TSHBP01222 138 aa11.85□□□□□ -0.51
PRPF40A-209ENST00000486100 ZNF25P17030 456 aaPredicted RBP11.85□□□□□ -0.51
PRPF40A-209ENST00000486100 RPS10P46783 165 aaKnown RBP11.85□□□□□ -0.51
PRPF40A-209ENST00000486100 CFAP161Q6P656 301 aa11.85□□□□□ -0.51
PRPF40A-209ENST00000486100 AP5S1Q9NUS5 200 aa11.85□□□□□ -0.51
PRPF40A-209ENST00000486100 TRBV27A0A0K0K1C4 114 aa11.84□□□□□ -0.51
PRPF40A-209ENST00000486100 CHCHD10Q8WYQ3 142 aaPredicted RBP11.84□□□□□ -0.51
PRPF40A-209ENST00000486100 BTF3L4Q96K17 158 aa11.84□□□□□ -0.51
PRPF40A-209ENST00000486100 TMEM242Q9NWH2 141 aa11.84□□□□□ -0.51
PRPF40A-209ENST00000486100 FLG2Q5D862 2391 aaPredicted RBP11.83□□□□□ -0.52
PRPF40A-209ENST00000486100 SMIM27A0A1W2PRY6 76 aa11.83□□□□□ -0.52
PRPF40A-209ENST00000486100 PPP1R17O96001 155 aa11.83□□□□□ -0.52
PRPF40A-209ENST00000486100 SLPIP03973 132 aa11.83□□□□□ -0.52
PRPF40A-209ENST00000486100 TMEM101Q96IK0 257 aa11.83□□□□□ -0.52
PRPF40A-209ENST00000486100 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.82□□□□□ -0.52
PRPF40A-209ENST00000486100 VCYO14598 125 aa11.82□□□□□ -0.52
PRPF40A-209ENST00000486100 OR5A1Q8NGJ0 315 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms