RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 TMEM70Q9BUB7 260 aa12.83□□□□□ -0.36
SNX5-213ENST00000486039 GFRA4Q9GZZ7 299 aa12.83□□□□□ -0.36
SNX5-213ENST00000486039 FAM30AQ9NZY2 134 aa12.83□□□□□ -0.36
SNX5-213ENST00000486039 HIGD1CA8MV81 97 aa12.82□□□□□ -0.36
SNX5-213ENST00000486039 RPL23P62829 140 aaKnown RBP12.82□□□□□ -0.36
SNX5-213ENST00000486039 MIAQ16674 131 aa12.82□□□□□ -0.36
SNX5-213ENST00000486039 TMEM241Q24JQ0 296 aa12.82□□□□□ -0.36
SNX5-213ENST00000486039 Q5VSD8 79 aa12.82□□□□□ -0.36
SNX5-213ENST00000486039 C20orf203Q8NBC4 194 aa12.82□□□□□ -0.36
SNX5-213ENST00000486039 ISOC2Q96AB3 205 aa12.82□□□□□ -0.36
SNX5-213ENST00000486039 V9GYV3 84 aa12.82□□□□□ -0.36
SNX5-213ENST00000486039 FAM231BA6NCW3 169 aa12.81□□□□□ -0.36
SNX5-213ENST00000486039 COTL1Q14019 142 aa12.81□□□□□ -0.36
SNX5-213ENST00000486039 FAM74A3Q4VXF1 159 aa12.81□□□□□ -0.36
SNX5-213ENST00000486039 BORCS7Q96B45 105 aa12.81□□□□□ -0.36
SNX5-213ENST00000486039 IGLV4-60A0A075B6I1 120 aa12.8□□□□□ -0.36
SNX5-213ENST00000486039 A0A1B0GUT8 65 aa12.8□□□□□ -0.36
SNX5-213ENST00000486039 A0A1B0GUV1 79 aa12.8□□□□□ -0.36
SNX5-213ENST00000486039 PEA15Q15121 130 aa12.8□□□□□ -0.36
SNX5-213ENST00000486039 KRTAP26-1Q6PEX3 210 aa12.8□□□□□ -0.36
SNX5-213ENST00000486039 GAS8-AS1O95177 125 aa12.79□□□□□ -0.36
SNX5-213ENST00000486039 SMR3BP02814 79 aaPredicted RBP12.79□□□□□ -0.36
SNX5-213ENST00000486039 AMTP48728 403 aa12.79□□□□□ -0.36
SNX5-213ENST00000486039 REG3AQ06141 175 aa12.79□□□□□ -0.36
SNX5-213ENST00000486039 NAT8Q9UHE5 227 aa12.79□□□□□ -0.36
SNX5-213ENST00000486039 HLA-DQA1P01909 254 aa12.78□□□□□ -0.36
SNX5-213ENST00000486039 LINC01620Q4KN68 170 aa12.78□□□□□ -0.36
SNX5-213ENST00000486039 TMEM191AQ9H0A3 160 aa12.78□□□□□ -0.36
SNX5-213ENST00000486039 SMDT1Q9H4I9 107 aa12.78□□□□□ -0.36
SNX5-213ENST00000486039 SDHAF1A6NFY7 115 aa12.77□□□□□ -0.37
SNX5-213ENST00000486039 ADIRFQ15847 76 aa12.77□□□□□ -0.37
SNX5-213ENST00000486039 NUP35Q8NFH5 326 aa12.77□□□□□ -0.37
SNX5-213ENST00000486039 RNF185Q96GF1 192 aa12.77□□□□□ -0.37
SNX5-213ENST00000486039 UBE2L6O14933 153 aa12.76□□□□□ -0.37
SNX5-213ENST00000486039 RAB14P61106 215 aa12.76□□□□□ -0.37
SNX5-213ENST00000486039 Q6ZSA8 131 aa12.76□□□□□ -0.37
SNX5-213ENST00000486039 IGLV10-54A0A075B6I4 117 aa12.75□□□□□ -0.37
SNX5-213ENST00000486039 TRBV6-5A0A0K0K1A5 114 aa12.75□□□□□ -0.37
SNX5-213ENST00000486039 USP17L23D6RBM5 183 aa12.75□□□□□ -0.37
SNX5-213ENST00000486039 NCR2O95944 276 aa12.75□□□□□ -0.37
SNX5-213ENST00000486039 RAB4AP20338 218 aa12.75□□□□□ -0.37
SNX5-213ENST00000486039 C14orf177Q52M58 125 aa12.74□□□□□ -0.37
SNX5-213ENST00000486039 AMN1Q8IY45 258 aa12.74□□□□□ -0.37
SNX5-213ENST00000486039 NAT8BQ9UHF3 227 aa12.74□□□□□ -0.37
SNX5-213ENST00000486039 FAM229AH3BQW9 127 aa12.73□□□□□ -0.37
SNX5-213ENST00000486039 RPS10P46783 165 aaKnown RBP12.73□□□□□ -0.37
SNX5-213ENST00000486039 RIGQ13278 110 aa12.73□□□□□ -0.37
SNX5-213ENST00000486039 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.72□□□□□ -0.37
SNX5-213ENST00000486039 TRAV8-4A0A0B4J246 113 aa12.72□□□□□ -0.37
SNX5-213ENST00000486039 IGKV2-29A2NJV5 120 aaPredicted RBP12.72□□□□□ -0.37
SNX5-213ENST00000486039 I3L3M4 83 aa12.72□□□□□ -0.37
SNX5-213ENST00000486039 APCSP02743 223 aa12.72□□□□□ -0.37
SNX5-213ENST00000486039 PRSS1P07477 247 aa12.72□□□□□ -0.37
SNX5-213ENST00000486039 MYCBP2O75592 4640 aa12.72□□□□□ -0.37
SNX5-213ENST00000486039 SMIM27A0A1W2PRY6 76 aa12.71□□□□□ -0.37
SNX5-213ENST00000486039 PMCHP20382 165 aa12.71□□□□□ -0.37
SNX5-213ENST00000486039 MRAP2Q96G30 205 aa12.71□□□□□ -0.37
SNX5-213ENST00000486039 ST20Q9HBF5 79 aa12.71□□□□□ -0.37
SNX5-213ENST00000486039 POLR2KP53803 58 aaKnown RBP12.7□□□□□ -0.38
SNX5-213ENST00000486039 SMKR1H3BMG3 65 aa12.69□□□□□ -0.38
SNX5-213ENST00000486039 H7C423 109 aa12.69□□□□□ -0.38
SNX5-213ENST00000486039 TSHBP01222 138 aa12.69□□□□□ -0.38
SNX5-213ENST00000486039 SRRM2Q9UQ35 2752 aaKnown RBP12.69□□□□□ -0.38
SNX5-213ENST00000486039 FGF6P10767 208 aa12.68□□□□□ -0.38
SNX5-213ENST00000486039 ESDP10768 282 aa12.68□□□□□ -0.38
SNX5-213ENST00000486039 AMMECR1LQ6DCA0 310 aa12.68□□□□□ -0.38
SNX5-213ENST00000486039 TMEM242Q9NWH2 141 aa12.68□□□□□ -0.38
SNX5-213ENST00000486039 DMBT1Q9UGM3 2413 aaPredicted RBP12.67□□□□□ -0.38
SNX5-213ENST00000486039 CLLU1Q5K131 121 aa12.67□□□□□ -0.38
SNX5-213ENST00000486039 RNASEKQ6P5S7 137 aaKnown RBP12.67□□□□□ -0.38
SNX5-213ENST00000486039 IGKV3OR2-268A0A0C4DH90 116 aa12.66□□□□□ -0.38
SNX5-213ENST00000486039 TRBV27A0A0K0K1C4 114 aa12.66□□□□□ -0.38
SNX5-213ENST00000486039 IFITM2Q01629 132 aa12.66□□□□□ -0.38
SNX5-213ENST00000486039 FAM104BQ5XKR9 115 aa12.66□□□□□ -0.38
SNX5-213ENST00000486039 SCXQ7RTU7 201 aa12.66□□□□□ -0.38
SNX5-213ENST00000486039 NRACQ8N912 160 aa12.66□□□□□ -0.38
SNX5-213ENST00000486039 CAMPP49913 170 aa12.65□□□□□ -0.38
SNX5-213ENST00000486039 MRPL51Q4U2R6 128 aaKnown RBP12.65□□□□□ -0.38
SNX5-213ENST00000486039 DGAT2L7PQ6IED9 249 aa12.65□□□□□ -0.38
SNX5-213ENST00000486039 CLRN3Q8NCR9 226 aa12.65□□□□□ -0.38
SNX5-213ENST00000486039 A0A1B0GW15 77 aa12.63□□□□□ -0.39
SNX5-213ENST00000486039 GAGE12HA6NDE8 117 aa12.63□□□□□ -0.39
SNX5-213ENST00000486039 ZNF25P17030 456 aaPredicted RBP12.63□□□□□ -0.39
SNX5-213ENST00000486039 C9orf163Q8N9P6 203 aa12.63□□□□□ -0.39
SNX5-213ENST00000486039 CHAC1Q9BUX1 264 aa12.63□□□□□ -0.39
SNX5-213ENST00000486039 FLG2Q5D862 2391 aaPredicted RBP12.62□□□□□ -0.39
SNX5-213ENST00000486039 VCYO14598 125 aa12.62□□□□□ -0.39
SNX5-213ENST00000486039 PPP1R17O96001 155 aa12.62□□□□□ -0.39
SNX5-213ENST00000486039 SUMO2P61956 95 aaKnown RBP12.62□□□□□ -0.39
SNX5-213ENST00000486039 MRPL54Q6P161 138 aaKnown RBP12.62□□□□□ -0.39
SNX5-213ENST00000486039 CIRBP-AS1Q8TBR5 109 aa12.62□□□□□ -0.39
SNX5-213ENST00000486039 CHCHD10Q8WYQ3 142 aaPredicted RBP12.62□□□□□ -0.39
SNX5-213ENST00000486039 A0A1B0GXF2 115 aa12.61□□□□□ -0.39
SNX5-213ENST00000486039 hDV102S1A0JD36 115 aa12.61□□□□□ -0.39
SNX5-213ENST00000486039 LINC00528Q8N1L1 170 aa12.61□□□□□ -0.39
SNX5-213ENST00000486039 OR5A1Q8NGJ0 315 aa12.61□□□□□ -0.39
SNX5-213ENST00000486039 BTF3L4Q96K17 158 aa12.61□□□□□ -0.39
SNX5-213ENST00000486039 C7orf77A4D0Y5 90 aa12.6□□□□□ -0.39
SNX5-213ENST00000486039 SLPIP03973 132 aa12.6□□□□□ -0.39
SNX5-213ENST00000486039 TMEM101Q96IK0 257 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms