RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 A8MWL6 223 aa4.62□□□□□ -1.67
VPS50-218ENST00000485994 RASL11AQ6T310 242 aa4.62□□□□□ -1.67
VPS50-218ENST00000485994 ENHOQ6UWT2 76 aa4.62□□□□□ -1.67
VPS50-218ENST00000485994 GFRA4Q9GZZ7 299 aa4.62□□□□□ -1.67
VPS50-218ENST00000485994 RNASE7Q9H1E1 156 aaKnown RBP4.62□□□□□ -1.67
VPS50-218ENST00000485994 SMDT1Q9H4I9 107 aa4.62□□□□□ -1.67
VPS50-218ENST00000485994 RPP21Q9H633 154 aaKnown RBP4.62□□□□□ -1.67
VPS50-218ENST00000485994 TRBV25-1A0A075B6N4 114 aa4.61□□□□□ -1.67
VPS50-218ENST00000485994 IGHV1-24A0A0C4DH33 117 aa4.61□□□□□ -1.67
VPS50-218ENST00000485994 TMEM262E9PQX1 116 aa4.61□□□□□ -1.67
VPS50-218ENST00000485994 GATCO43716 136 aaKnown RBP4.61□□□□□ -1.67
VPS50-218ENST00000485994 SSTP61278 116 aa4.61□□□□□ -1.67
VPS50-218ENST00000485994 MIAQ16674 131 aa4.61□□□□□ -1.67
VPS50-218ENST00000485994 FAM74A3Q4VXF1 159 aa4.61□□□□□ -1.67
VPS50-218ENST00000485994 SUMO4Q6EEV6 95 aa4.61□□□□□ -1.67
VPS50-218ENST00000485994 Q6ZSA8 131 aa4.61□□□□□ -1.67
VPS50-218ENST00000485994 GTSF1Q8WW33 167 aa4.61□□□□□ -1.67
VPS50-218ENST00000485994 UBE2WQ96B02 151 aa4.61□□□□□ -1.67
VPS50-218ENST00000485994 TPPP3Q9BW30 176 aa4.61□□□□□ -1.67
VPS50-218ENST00000485994 EIF5A2Q9GZV4 153 aaKnown RBP4.61□□□□□ -1.67
VPS50-218ENST00000485994 OSTCQ9NRP0 149 aa4.61□□□□□ -1.67
VPS50-218ENST00000485994 IGKV2D-24A0A075B6R9 120 aa4.6□□□□□ -1.67
VPS50-218ENST00000485994 TRAV8-4A0A0B4J246 113 aa4.6□□□□□ -1.67
VPS50-218ENST00000485994 WFDC2Q14508 124 aa4.6□□□□□ -1.67
VPS50-218ENST00000485994 TWIST1Q15672 202 aa4.6□□□□□ -1.67
VPS50-218ENST00000485994 C14orf177Q52M58 125 aa4.6□□□□□ -1.67
VPS50-218ENST00000485994 MPV17L2Q567V2 206 aa4.6□□□□□ -1.67
VPS50-218ENST00000485994 SMIM15Q7Z3B0 74 aa4.6□□□□□ -1.67
VPS50-218ENST00000485994 LINC01551Q86U37 167 aa4.6□□□□□ -1.67
VPS50-218ENST00000485994 GATD1Q8NB37 220 aa4.6□□□□□ -1.67
VPS50-218ENST00000485994 BAALCQ8WXS3 180 aa4.6□□□□□ -1.67
VPS50-218ENST00000485994 CHCHD5Q9BSY4 110 aa4.6□□□□□ -1.67
VPS50-218ENST00000485994 TRBV6-5A0A0K0K1A5 114 aa4.59□□□□□ -1.67
VPS50-218ENST00000485994 EPM2AB3EWF7 344 aa4.59□□□□□ -1.67
VPS50-218ENST00000485994 H3BS24 57 aa4.59□□□□□ -1.67
VPS50-218ENST00000485994 H7C423 109 aa4.59□□□□□ -1.67
VPS50-218ENST00000485994 NCR2O95944 276 aa4.59□□□□□ -1.67
VPS50-218ENST00000485994 ANGP03950 147 aaKnown RBP4.59□□□□□ -1.67
VPS50-218ENST00000485994 MGPP08493 103 aa4.59□□□□□ -1.67
VPS50-218ENST00000485994 FUSP35637 526 aaKnown RBP eCLIP4.59□□□□□ -1.67
VPS50-218ENST00000485994 RBX1P62877 108 aa4.59□□□□□ -1.67
VPS50-218ENST00000485994 PEA15Q15121 130 aa4.59□□□□□ -1.67
VPS50-218ENST00000485994 TMEM241Q24JQ0 296 aa4.59□□□□□ -1.67
VPS50-218ENST00000485994 DGAT2L7PQ6IED9 249 aa4.59□□□□□ -1.67
VPS50-218ENST00000485994 KRTAP26-1Q6PEX3 210 aa4.59□□□□□ -1.67
VPS50-218ENST00000485994 TSKUQ8WUA8 353 aa4.59□□□□□ -1.67
VPS50-218ENST00000485994 SMIM7Q9BQ49 75 aa4.59□□□□□ -1.67
VPS50-218ENST00000485994 C1orf43Q9BWL3 253 aa4.59□□□□□ -1.67
VPS50-218ENST00000485994 SRRM2Q9UQ35 2752 aaKnown RBP4.58□□□□□ -1.68
VPS50-218ENST00000485994 A0A1B0GUT8 65 aa4.58□□□□□ -1.68
VPS50-218ENST00000485994 ZNF727A8MUV8 499 aa4.58□□□□□ -1.68
VPS50-218ENST00000485994 CRPP02741 224 aa4.58□□□□□ -1.68
VPS50-218ENST00000485994 COTL1Q14019 142 aa4.58□□□□□ -1.68
VPS50-218ENST00000485994 C15orf54Q8N8G6 183 aa4.58□□□□□ -1.68
VPS50-218ENST00000485994 CLRN3Q8NCR9 226 aa4.58□□□□□ -1.68
VPS50-218ENST00000485994 TMEM243Q9BU79 118 aa4.58□□□□□ -1.68
VPS50-218ENST00000485994 TMEM191AQ9H0A3 160 aa4.58□□□□□ -1.68
VPS50-218ENST00000485994 FAM30AQ9NZY2 134 aa4.58□□□□□ -1.68
VPS50-218ENST00000485994 LINC00862A6NCI5 91 aa4.57□□□□□ -1.68
VPS50-218ENST00000485994 HIGD1CA8MV81 97 aa4.57□□□□□ -1.68
VPS50-218ENST00000485994 CEBPGP53567 150 aa4.57□□□□□ -1.68
VPS50-218ENST00000485994 POLR2KP53803 58 aaKnown RBP4.57□□□□□ -1.68
VPS50-218ENST00000485994 RAB14P61106 215 aa4.57□□□□□ -1.68
VPS50-218ENST00000485994 RPL23P62829 140 aaKnown RBP4.57□□□□□ -1.68
VPS50-218ENST00000485994 REG3AQ06141 175 aa4.57□□□□□ -1.68
VPS50-218ENST00000485994 GAGE6Q13070 117 aa4.57□□□□□ -1.68
VPS50-218ENST00000485994 LINC00269Q8N2A0 174 aa4.57□□□□□ -1.68
VPS50-218ENST00000485994 C20orf203Q8NBC4 194 aa4.57□□□□□ -1.68
VPS50-218ENST00000485994 V9GYV3 84 aa4.57□□□□□ -1.68
VPS50-218ENST00000485994 FLG2Q5D862 2391 aaPredicted RBP4.56□□□□□ -1.68
VPS50-218ENST00000485994 IGLV4-60A0A075B6I1 120 aa4.56□□□□□ -1.68
VPS50-218ENST00000485994 TRBV27A0A0K0K1C4 114 aa4.56□□□□□ -1.68
VPS50-218ENST00000485994 SDHAF1A6NFY7 115 aa4.56□□□□□ -1.68
VPS50-218ENST00000485994 PPP1R17O96001 155 aa4.56□□□□□ -1.68
VPS50-218ENST00000485994 RAB4AP20338 218 aa4.56□□□□□ -1.68
VPS50-218ENST00000485994 C9orf163Q8N9P6 203 aa4.56□□□□□ -1.68
VPS50-218ENST00000485994 ISOC2Q96AB3 205 aa4.56□□□□□ -1.68
VPS50-218ENST00000485994 BORCS7Q96B45 105 aa4.56□□□□□ -1.68
VPS50-218ENST00000485994 RNF185Q96GF1 192 aa4.56□□□□□ -1.68
VPS50-218ENST00000485994 NAT8Q9UHE5 227 aa4.56□□□□□ -1.68
VPS50-218ENST00000485994 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.55□□□□□ -1.68
VPS50-218ENST00000485994 TRAV26-2A0A0B4J265 109 aa4.55□□□□□ -1.68
VPS50-218ENST00000485994 A0A1B0GW15 77 aa4.55□□□□□ -1.68
VPS50-218ENST00000485994 SMIM27A0A1W2PRY6 76 aa4.55□□□□□ -1.68
VPS50-218ENST00000485994 USP17L23D6RBM5 183 aa4.55□□□□□ -1.68
VPS50-218ENST00000485994 I3L3M4 83 aa4.55□□□□□ -1.68
VPS50-218ENST00000485994 UBE2L6O14933 153 aa4.55□□□□□ -1.68
VPS50-218ENST00000485994 LECT2O14960 151 aa4.55□□□□□ -1.68
VPS50-218ENST00000485994 ESDP10768 282 aa4.55□□□□□ -1.68
VPS50-218ENST00000485994 ZNF25P17030 456 aaPredicted RBP4.55□□□□□ -1.68
VPS50-218ENST00000485994 ADCYAP1P18509 176 aa4.55□□□□□ -1.68
VPS50-218ENST00000485994 AMTP48728 403 aa4.55□□□□□ -1.68
VPS50-218ENST00000485994 RIGQ13278 110 aa4.55□□□□□ -1.68
VPS50-218ENST00000485994 Q5VSD8 79 aa4.55□□□□□ -1.68
VPS50-218ENST00000485994 NUP35Q8NFH5 326 aa4.55□□□□□ -1.68
VPS50-218ENST00000485994 MRAP2Q96G30 205 aa4.55□□□□□ -1.68
VPS50-218ENST00000485994 CHAC1Q9BUX1 264 aa4.55□□□□□ -1.68
VPS50-218ENST00000485994 NAT8BQ9UHF3 227 aa4.55□□□□□ -1.68
VPS50-218ENST00000485994 TMEM218A2RU14 115 aa4.54□□□□□ -1.68
VPS50-218ENST00000485994 SMR3BP02814 79 aaPredicted RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms