RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 S100PP25815 95 aa7.97□□□□□ -1.13
HPS4-214ENST00000485842 PKIAP61925 76 aa7.97□□□□□ -1.13
HPS4-214ENST00000485842 LAGE3Q14657 143 aa7.97□□□□□ -1.13
HPS4-214ENST00000485842 ATRAIDQ6UW56 229 aa7.97□□□□□ -1.13
HPS4-214ENST00000485842 Q6ZRN7 208 aaPredicted RBP7.97□□□□□ -1.13
HPS4-214ENST00000485842 NRACQ8N912 160 aa7.97□□□□□ -1.13
HPS4-214ENST00000485842 TMEM70Q9BUB7 260 aa7.97□□□□□ -1.13
HPS4-214ENST00000485842 TMEM242Q9NWH2 141 aa7.97□□□□□ -1.13
HPS4-214ENST00000485842 I3L3M4 83 aa7.96□□□□□ -1.14
HPS4-214ENST00000485842 UBE2L6O14933 153 aa7.96□□□□□ -1.14
HPS4-214ENST00000485842 ANGP03950 147 aaKnown RBP7.96□□□□□ -1.14
HPS4-214ENST00000485842 SUMO2P61956 95 aaKnown RBP7.96□□□□□ -1.14
HPS4-214ENST00000485842 ELOBQ15370 118 aa7.96□□□□□ -1.14
HPS4-214ENST00000485842 Q8N976 141 aa7.96□□□□□ -1.14
HPS4-214ENST00000485842 UBE2WQ96B02 151 aa7.96□□□□□ -1.14
HPS4-214ENST00000485842 FRAS1Q86XX4 4008 aa7.96□□□□□ -1.14
HPS4-214ENST00000485842 PSCAO43653 123 aa7.95□□□□□ -1.14
HPS4-214ENST00000485842 SNAPINO95295 136 aa7.95□□□□□ -1.14
HPS4-214ENST00000485842 POLR2KP53803 58 aaKnown RBP7.95□□□□□ -1.14
HPS4-214ENST00000485842 RBX1P62877 108 aa7.95□□□□□ -1.14
HPS4-214ENST00000485842 SLC7A5P1Q8MH63 180 aa7.95□□□□□ -1.14
HPS4-214ENST00000485842 SVBPQ8N300 66 aa7.95□□□□□ -1.14
HPS4-214ENST00000485842 DNAH10Q8IVF4 4471 aa7.94□□□□□ -1.14
HPS4-214ENST00000485842 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.94□□□□□ -1.14
HPS4-214ENST00000485842 TRAV9-1A0A075B6T8 112 aa7.94□□□□□ -1.14
HPS4-214ENST00000485842 TRAV8-3A0A0A6YYJ7 113 aa7.94□□□□□ -1.14
HPS4-214ENST00000485842 A0A1B0GVY2 172 aa7.94□□□□□ -1.14
HPS4-214ENST00000485842 IGKV2-29A2NJV5 120 aaPredicted RBP7.94□□□□□ -1.14
HPS4-214ENST00000485842 TNFRSF6BO95407 300 aa7.94□□□□□ -1.14
HPS4-214ENST00000485842 TSHBP01222 138 aa7.94□□□□□ -1.14
HPS4-214ENST00000485842 NPYP01303 97 aa7.94□□□□□ -1.14
HPS4-214ENST00000485842 CRPP02741 224 aa7.94□□□□□ -1.14
HPS4-214ENST00000485842 PPBPP02775 128 aa7.94□□□□□ -1.14
HPS4-214ENST00000485842 FCER1GP30273 86 aa7.94□□□□□ -1.14
HPS4-214ENST00000485842 CLPSL2Q6UWE3 100 aa7.94□□□□□ -1.14
HPS4-214ENST00000485842 ORMDL3Q8N138 153 aa7.94□□□□□ -1.14
HPS4-214ENST00000485842 TRBV27A0A0K0K1C4 114 aa7.93□□□□□ -1.14
HPS4-214ENST00000485842 VCYO14598 125 aa7.93□□□□□ -1.14
HPS4-214ENST00000485842 TMEM136Q6ZRR5 245 aa7.93□□□□□ -1.14
HPS4-214ENST00000485842 PRELID3AQ96N28 172 aa7.93□□□□□ -1.14
HPS4-214ENST00000485842 IGKV2D-24A0A075B6R9 120 aa7.92□□□□□ -1.14
HPS4-214ENST00000485842 AMMECR1LQ6DCA0 310 aa7.92□□□□□ -1.14
HPS4-214ENST00000485842 RNASEKQ6P5S7 137 aaKnown RBP7.92□□□□□ -1.14
HPS4-214ENST00000485842 RMI2Q96E14 147 aa7.92□□□□□ -1.14
HPS4-214ENST00000485842 KIR2DL4Q99706 377 aa7.92□□□□□ -1.14
HPS4-214ENST00000485842 C20orf78Q9BR46 151 aa7.92□□□□□ -1.14
HPS4-214ENST00000485842 SMIM2Q9BVW6 85 aa7.92□□□□□ -1.14
HPS4-214ENST00000485842 TM2D2Q9BX73 214 aa7.92□□□□□ -1.14
HPS4-214ENST00000485842 IGLV4-60A0A075B6I1 120 aa7.91□□□□□ -1.14
HPS4-214ENST00000485842 TRBV24-1A0A075B6N3 115 aa7.91□□□□□ -1.14
HPS4-214ENST00000485842 PHOX2AO14813 284 aa7.91□□□□□ -1.14
HPS4-214ENST00000485842 FGF6P10767 208 aa7.91□□□□□ -1.14
HPS4-214ENST00000485842 Q0VG73 95 aa7.91□□□□□ -1.14
HPS4-214ENST00000485842 ENHOQ6UWT2 76 aa7.91□□□□□ -1.14
HPS4-214ENST00000485842 LINC00269Q8N2A0 174 aa7.91□□□□□ -1.14
HPS4-214ENST00000485842 C20orf203Q8NBC4 194 aa7.91□□□□□ -1.14
HPS4-214ENST00000485842 A0A1B0GUV1 79 aa7.9□□□□□ -1.14
HPS4-214ENST00000485842 EREGO14944 169 aa7.9□□□□□ -1.14
HPS4-214ENST00000485842 HLA-DQA1P01909 254 aa7.9□□□□□ -1.14
HPS4-214ENST00000485842 ESDP10768 282 aa7.9□□□□□ -1.14
HPS4-214ENST00000485842 RPL32P62910 135 aaKnown RBP7.9□□□□□ -1.14
HPS4-214ENST00000485842 C1orf43Q9BWL3 253 aa7.9□□□□□ -1.14
HPS4-214ENST00000485842 DNAH2Q9P225 4427 aa7.89□□□□□ -1.15
HPS4-214ENST00000485842 A0A087WTM6 91 aa7.89□□□□□ -1.15
HPS4-214ENST00000485842 TGIF2-C20orf24A0A0A6YYL0 155 aa7.89□□□□□ -1.15
HPS4-214ENST00000485842 LOC389332A0A1B0GUA5 103 aa7.89□□□□□ -1.15
HPS4-214ENST00000485842 H7C423 109 aa7.89□□□□□ -1.15
HPS4-214ENST00000485842 REG3AQ06141 175 aa7.89□□□□□ -1.15
HPS4-214ENST00000485842 KIAA1644Q3SXP7 199 aa7.89□□□□□ -1.15
HPS4-214ENST00000485842 SPATA12Q7Z6I5 190 aa7.89□□□□□ -1.15
HPS4-214ENST00000485842 MAP1LC3AQ9H492 121 aa7.89□□□□□ -1.15
HPS4-214ENST00000485842 LAMTOR2Q9Y2Q5 125 aa7.89□□□□□ -1.15
HPS4-214ENST00000485842 COX11Q9Y6N1 276 aa7.89□□□□□ -1.15
HPS4-214ENST00000485842 DNAH17Q9UFH2 4485 aa7.89□□□□□ -1.15
HPS4-214ENST00000485842 IGLV10-54A0A075B6I4 117 aa7.88□□□□□ -1.15
HPS4-214ENST00000485842 IGKV3OR2-268A0A0C4DH90 116 aa7.88□□□□□ -1.15
HPS4-214ENST00000485842 MIAQ16674 131 aa7.88□□□□□ -1.15
HPS4-214ENST00000485842 COX19Q49B96 90 aa7.88□□□□□ -1.15
HPS4-214ENST00000485842 TMEM101Q96IK0 257 aa7.88□□□□□ -1.15
HPS4-214ENST00000485842 GNB1LQ9BYB4 327 aa7.88□□□□□ -1.15
HPS4-214ENST00000485842 PRR34Q9NV39 138 aa7.88□□□□□ -1.15
HPS4-214ENST00000485842 LECT2O14960 151 aa7.87□□□□□ -1.15
HPS4-214ENST00000485842 TCAPO15273 167 aa7.87□□□□□ -1.15
HPS4-214ENST00000485842 ZNF25P17030 456 aaPredicted RBP7.87□□□□□ -1.15
HPS4-214ENST00000485842 OR5A1Q8NGJ0 315 aa7.87□□□□□ -1.15
HPS4-214ENST00000485842 BAALCQ8WXS3 180 aa7.87□□□□□ -1.15
HPS4-214ENST00000485842 LRCOL1A6NCL2 159 aa7.86□□□□□ -1.15
HPS4-214ENST00000485842 MT-ND6P03923 174 aa7.86□□□□□ -1.15
HPS4-214ENST00000485842 RAB5AP20339 215 aa7.86□□□□□ -1.15
HPS4-214ENST00000485842 FUSP35637 526 aaKnown RBP eCLIP7.86□□□□□ -1.15
HPS4-214ENST00000485842 KRTAP10-2P60368 255 aa7.86□□□□□ -1.15
HPS4-214ENST00000485842 WFDC2Q14508 124 aa7.86□□□□□ -1.15
HPS4-214ENST00000485842 DGAT2L7PQ6IED9 249 aa7.86□□□□□ -1.15
HPS4-214ENST00000485842 MAPKAPK5-AS1Q8N8E1 139 aa7.86□□□□□ -1.15
HPS4-214ENST00000485842 TMEM18Q96B42 140 aa7.86□□□□□ -1.15
HPS4-214ENST00000485842 MRPL18Q9H0U6 180 aaKnown RBP7.86□□□□□ -1.15
HPS4-214ENST00000485842 HECTD4Q9Y4D8 3996 aa7.86□□□□□ -1.15
HPS4-214ENST00000485842 C16orf90A8MZG2 172 aa7.85□□□□□ -1.15
HPS4-214ENST00000485842 FABP9Q0Z7S8 132 aa7.85□□□□□ -1.15
HPS4-214ENST00000485842 MRPL52Q86TS9 123 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms