RNA–Protein interactions for RNA: ENST00000485780.1

SHROOM3-207, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-207ENST00000485780 PRSS29PA6NIE9 313 aa6.34□□□□□ -1.39
SHROOM3-207ENST00000485780 K7EP13 123 aa6.34□□□□□ -1.39
SHROOM3-207ENST00000485780 SIVA1O15304 175 aa6.34□□□□□ -1.39
SHROOM3-207ENST00000485780 NCR2O95944 276 aa6.34□□□□□ -1.39
SHROOM3-207ENST00000485780 HLA-DQA1P01909 254 aa6.34□□□□□ -1.39
SHROOM3-207ENST00000485780 TRGC2P03986 189 aa6.34□□□□□ -1.39
SHROOM3-207ENST00000485780 POLR2KP53803 58 aaKnown RBP6.34□□□□□ -1.39
SHROOM3-207ENST00000485780 IQCJQ1A5X6 159 aa6.34□□□□□ -1.39
SHROOM3-207ENST00000485780 LINC01556Q5JQF7 62 aa6.34□□□□□ -1.39
SHROOM3-207ENST00000485780 TMEM70Q9BUB7 260 aa6.34□□□□□ -1.39
SHROOM3-207ENST00000485780 GNB1LQ9BYB4 327 aa6.34□□□□□ -1.39
SHROOM3-207ENST00000485780 KRTAP1-5Q9BYS1 174 aa6.34□□□□□ -1.39
SHROOM3-207ENST00000485780 HERC2O95714 4834 aa6.33□□□□□ -1.4
SHROOM3-207ENST00000485780 DNAH11Q96DT5 4516 aa6.33□□□□□ -1.4
SHROOM3-207ENST00000485780 TRAV8-6A0A0B4J262 113 aa6.33□□□□□ -1.4
SHROOM3-207ENST00000485780 IGHV3-38A0A0C4DH36 116 aa6.33□□□□□ -1.4
SHROOM3-207ENST00000485780 NBDYA0A0U1RRE5 68 aa6.33□□□□□ -1.4
SHROOM3-207ENST00000485780 PRSS47A8MTI9 375 aa6.33□□□□□ -1.4
SHROOM3-207ENST00000485780 D6R8Y8 96 aa6.33□□□□□ -1.4
SHROOM3-207ENST00000485780 SMKR1H3BMG3 65 aa6.33□□□□□ -1.4
SHROOM3-207ENST00000485780 RTL8CO15255 209 aa6.33□□□□□ -1.4
SHROOM3-207ENST00000485780 HIST1H2BKO60814 126 aa6.33□□□□□ -1.4
SHROOM3-207ENST00000485780 MT-ND6P03923 174 aa6.33□□□□□ -1.4
SHROOM3-207ENST00000485780 HIST1H2BJP06899 126 aa6.33□□□□□ -1.4
SHROOM3-207ENST00000485780 BTF3P20290 206 aaKnown RBP6.33□□□□□ -1.4
SHROOM3-207ENST00000485780 HIST1H2BOP23527 126 aa6.33□□□□□ -1.4
SHROOM3-207ENST00000485780 HIST1H2BBP33778 126 aa6.33□□□□□ -1.4
SHROOM3-207ENST00000485780 HIST1H2BDP58876 126 aa6.33□□□□□ -1.4
SHROOM3-207ENST00000485780 SUMO2P61956 95 aaKnown RBP6.33□□□□□ -1.4
SHROOM3-207ENST00000485780 HIST1H2BCP62807 126 aa6.33□□□□□ -1.4
SHROOM3-207ENST00000485780 HIST2H2BEQ16778 126 aa6.33□□□□□ -1.4
SHROOM3-207ENST00000485780 COA6Q5JTJ3 125 aaKnown RBP6.33□□□□□ -1.4
SHROOM3-207ENST00000485780 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.33□□□□□ -1.4
SHROOM3-207ENST00000485780 C1orf134Q5TEV5 83 aa6.33□□□□□ -1.4
SHROOM3-207ENST00000485780 LINC00518Q8N0U6 118 aa6.33□□□□□ -1.4
SHROOM3-207ENST00000485780 ORMDL3Q8N138 153 aa6.33□□□□□ -1.4
SHROOM3-207ENST00000485780 HIST1H2BHQ93079 126 aa6.33□□□□□ -1.4
SHROOM3-207ENST00000485780 HIST1H2BNQ99877 126 aa6.33□□□□□ -1.4
SHROOM3-207ENST00000485780 HIST1H2BMQ99879 126 aa6.33□□□□□ -1.4
SHROOM3-207ENST00000485780 C20orf78Q9BR46 151 aa6.33□□□□□ -1.4
SHROOM3-207ENST00000485780 CHCHD7Q9BUK0 85 aa6.33□□□□□ -1.4
SHROOM3-207ENST00000485780 ST20Q9HBF5 79 aa6.33□□□□□ -1.4
SHROOM3-207ENST00000485780 LAMTOR2Q9Y2Q5 125 aa6.33□□□□□ -1.4
SHROOM3-207ENST00000485780 TNFRSF6BO95407 300 aa6.32□□□□□ -1.4
SHROOM3-207ENST00000485780 NPYP01303 97 aa6.32□□□□□ -1.4
SHROOM3-207ENST00000485780 S100A6P06703 90 aa6.32□□□□□ -1.4
SHROOM3-207ENST00000485780 CKS2P33552 79 aa6.32□□□□□ -1.4
SHROOM3-207ENST00000485780 TTC32Q5I0X7 151 aa6.32□□□□□ -1.4
SHROOM3-207ENST00000485780 NIT1Q86X76 327 aa6.32□□□□□ -1.4
SHROOM3-207ENST00000485780 TRBV25-1A0A075B6N4 114 aa6.31□□□□□ -1.4
SHROOM3-207ENST00000485780 IGHV1-24A0A0C4DH33 117 aa6.31□□□□□ -1.4
SHROOM3-207ENST00000485780 I3L3M4 83 aa6.31□□□□□ -1.4
SHROOM3-207ENST00000485780 FABP9Q0Z7S8 132 aa6.31□□□□□ -1.4
SHROOM3-207ENST00000485780 COTL1Q14019 142 aa6.31□□□□□ -1.4
SHROOM3-207ENST00000485780 PRELID3AQ96N28 172 aa6.31□□□□□ -1.4
SHROOM3-207ENST00000485780 IFITM10A6NMD0 228 aa6.3□□□□□ -1.4
SHROOM3-207ENST00000485780 VCYO14598 125 aa6.3□□□□□ -1.4
SHROOM3-207ENST00000485780 TSHBP01222 138 aa6.3□□□□□ -1.4
SHROOM3-207ENST00000485780 ESDP10768 282 aa6.3□□□□□ -1.4
SHROOM3-207ENST00000485780 PKIAP61925 76 aa6.3□□□□□ -1.4
SHROOM3-207ENST00000485780 LAGE3Q14657 143 aa6.3□□□□□ -1.4
SHROOM3-207ENST00000485780 C10orf126Q8N4M7 172 aa6.3□□□□□ -1.4
SHROOM3-207ENST00000485780 SMIM2Q9BVW6 85 aa6.3□□□□□ -1.4
SHROOM3-207ENST00000485780 A0A1B0GVY2 172 aa6.29□□□□□ -1.4
SHROOM3-207ENST00000485780 H7C423 109 aa6.29□□□□□ -1.4
SHROOM3-207ENST00000485780 APCSP02743 223 aa6.29□□□□□ -1.4
SHROOM3-207ENST00000485780 NDUFA6P56556 154 aa6.29□□□□□ -1.4
SHROOM3-207ENST00000485780 C6orf223Q8N319 242 aa6.29□□□□□ -1.4
SHROOM3-207ENST00000485780 Q8N3U1 123 aa6.29□□□□□ -1.4
SHROOM3-207ENST00000485780 TMEM243Q9BU79 118 aa6.29□□□□□ -1.4
SHROOM3-207ENST00000485780 TRAV9-2A0A087WT02 112 aa6.28□□□□□ -1.4
SHROOM3-207ENST00000485780 A0A1B0GUV1 79 aa6.28□□□□□ -1.4
SHROOM3-207ENST00000485780 IBA57-AS1B1ANH7 110 aa6.28□□□□□ -1.4
SHROOM3-207ENST00000485780 TCAPO15273 167 aa6.28□□□□□ -1.4
SHROOM3-207ENST00000485780 AMTP48728 403 aa6.28□□□□□ -1.4
SHROOM3-207ENST00000485780 MPV17L2Q567V2 206 aa6.28□□□□□ -1.4
SHROOM3-207ENST00000485780 KIR2DL4Q99706 377 aa6.28□□□□□ -1.4
SHROOM3-207ENST00000485780 ALKBH7Q9BT30 221 aaPredicted RBP6.28□□□□□ -1.4
SHROOM3-207ENST00000485780 MRPL18Q9H0U6 180 aaKnown RBP6.28□□□□□ -1.4
SHROOM3-207ENST00000485780 PMCHP20382 165 aa6.27□□□□□ -1.41
SHROOM3-207ENST00000485780 KIAA1644Q3SXP7 199 aa6.27□□□□□ -1.41
SHROOM3-207ENST00000485780 Q6ZRN7 208 aaPredicted RBP6.27□□□□□ -1.41
SHROOM3-207ENST00000485780 HIST3H2BBQ8N257 126 aa6.27□□□□□ -1.41
SHROOM3-207ENST00000485780 CHCHD5Q9BSY4 110 aa6.27□□□□□ -1.41
SHROOM3-207ENST00000485780 MAP1LC3AQ9H492 121 aa6.27□□□□□ -1.41
SHROOM3-207ENST00000485780 TRAPPC1Q9Y5R8 145 aa6.27□□□□□ -1.41
SHROOM3-207ENST00000485780 A0A087WX48 190 aa6.26□□□□□ -1.41
SHROOM3-207ENST00000485780 LINC01546A6NGU7 62 aa6.26□□□□□ -1.41
SHROOM3-207ENST00000485780 K7EMI3 77 aa6.26□□□□□ -1.41
SHROOM3-207ENST00000485780 IGHV3-30P01768 117 aa6.26□□□□□ -1.41
SHROOM3-207ENST00000485780 IGHV3-33P01772 117 aa6.26□□□□□ -1.41
SHROOM3-207ENST00000485780 IGHV3-30-3P0DP02 117 aa6.26□□□□□ -1.41
SHROOM3-207ENST00000485780 IGHV3-30-5P0DP03 117 aa6.26□□□□□ -1.41
SHROOM3-207ENST00000485780 AKR1D1P51857 326 aa6.26□□□□□ -1.41
SHROOM3-207ENST00000485780 RBX1P62877 108 aa6.26□□□□□ -1.41
SHROOM3-207ENST00000485780 C4orf48Q5BLP8 95 aa6.26□□□□□ -1.41
SHROOM3-207ENST00000485780 MRPL52Q86TS9 123 aaKnown RBP6.26□□□□□ -1.41
SHROOM3-207ENST00000485780 Q8N8P6 123 aa6.26□□□□□ -1.41
SHROOM3-207ENST00000485780 DEFB104AQ8WTQ1 72 aa6.26□□□□□ -1.41
SHROOM3-207ENST00000485780 NXT2Q9NPJ8 142 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms