RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 A0A1B0GUV1 79 aa11.87□□□□□ -0.51
SREBF1-213ENST00000485080 GAS8-AS1O95177 125 aa11.87□□□□□ -0.51
SREBF1-213ENST00000485080 POLR2KP53803 58 aaKnown RBP11.87□□□□□ -0.51
SREBF1-213ENST00000485080 Q0VG73 95 aa11.87□□□□□ -0.51
SREBF1-213ENST00000485080 IMMP2LQ96T52 175 aa11.87□□□□□ -0.51
SREBF1-213ENST00000485080 TMEM70Q9BUB7 260 aa11.87□□□□□ -0.51
SREBF1-213ENST00000485080 Q9HAA7 133 aa11.87□□□□□ -0.51
SREBF1-213ENST00000485080 ST20Q9HBF5 79 aa11.87□□□□□ -0.51
SREBF1-213ENST00000485080 TRBV27A0A0K0K1C4 114 aa11.86□□□□□ -0.51
SREBF1-213ENST00000485080 I3L3M4 83 aa11.86□□□□□ -0.51
SREBF1-213ENST00000485080 EREGO14944 169 aa11.86□□□□□ -0.51
SREBF1-213ENST00000485080 RPS10P46783 165 aaKnown RBP11.86□□□□□ -0.51
SREBF1-213ENST00000485080 RBX1P62877 108 aa11.86□□□□□ -0.51
SREBF1-213ENST00000485080 MRPL51Q4U2R6 128 aaKnown RBP11.86□□□□□ -0.51
SREBF1-213ENST00000485080 MRPL54Q6P161 138 aaKnown RBP11.86□□□□□ -0.51
SREBF1-213ENST00000485080 NRACQ8N912 160 aa11.86□□□□□ -0.51
SREBF1-213ENST00000485080 RMI2Q96E14 147 aa11.86□□□□□ -0.51
SREBF1-213ENST00000485080 CTDSP1Q9GZU7 261 aa11.86□□□□□ -0.51
SREBF1-213ENST00000485080 LRCOL1A6NCL2 159 aa11.85□□□□□ -0.51
SREBF1-213ENST00000485080 AMTP48728 403 aa11.85□□□□□ -0.51
SREBF1-213ENST00000485080 GAGE6Q13070 117 aa11.85□□□□□ -0.51
SREBF1-213ENST00000485080 PRR34Q9NV39 138 aa11.85□□□□□ -0.51
SREBF1-213ENST00000485080 TRBV24-1A0A075B6N3 115 aa11.84□□□□□ -0.51
SREBF1-213ENST00000485080 H7C423 109 aa11.84□□□□□ -0.51
SREBF1-213ENST00000485080 PSCAO43653 123 aa11.84□□□□□ -0.51
SREBF1-213ENST00000485080 Q8N976 141 aa11.84□□□□□ -0.51
SREBF1-213ENST00000485080 UBE2WQ96B02 151 aa11.84□□□□□ -0.51
SREBF1-213ENST00000485080 CARHSP1Q9Y2V2 147 aaKnown RBP11.84□□□□□ -0.51
SREBF1-213ENST00000485080 KIAA1109Q2LD37 5005 aa11.84□□□□□ -0.51
SREBF1-213ENST00000485080 RPL32P62910 135 aaKnown RBP11.83□□□□□ -0.52
SREBF1-213ENST00000485080 ENHOQ6UWT2 76 aa11.83□□□□□ -0.52
SREBF1-213ENST00000485080 SPATA12Q7Z6I5 190 aa11.83□□□□□ -0.52
SREBF1-213ENST00000485080 BTF3L4Q96K17 158 aa11.83□□□□□ -0.52
SREBF1-213ENST00000485080 TMEM242Q9NWH2 141 aa11.83□□□□□ -0.52
SREBF1-213ENST00000485080 PGPEP1Q9NXJ5 209 aa11.83□□□□□ -0.52
SREBF1-213ENST00000485080 VCYO14598 125 aa11.82□□□□□ -0.52
SREBF1-213ENST00000485080 PPBPP02775 128 aa11.82□□□□□ -0.52
SREBF1-213ENST00000485080 ANGP03950 147 aaKnown RBP11.82□□□□□ -0.52
SREBF1-213ENST00000485080 PMCHP20382 165 aa11.82□□□□□ -0.52
SREBF1-213ENST00000485080 KRTAP10-2P60368 255 aa11.82□□□□□ -0.52
SREBF1-213ENST00000485080 SUMO2P61956 95 aaKnown RBP11.82□□□□□ -0.52
SREBF1-213ENST00000485080 MIAQ16674 131 aa11.82□□□□□ -0.52
SREBF1-213ENST00000485080 C20orf78Q9BR46 151 aa11.82□□□□□ -0.52
SREBF1-213ENST00000485080 APOBP04114 4563 aaKnown RBP11.82□□□□□ -0.52
SREBF1-213ENST00000485080 HERC2O95714 4834 aa11.81□□□□□ -0.52
SREBF1-213ENST00000485080 SMKR1H3BMG3 65 aa11.81□□□□□ -0.52
SREBF1-213ENST00000485080 PHOX2AO14813 284 aa11.81□□□□□ -0.52
SREBF1-213ENST00000485080 UBE2L6O14933 153 aa11.81□□□□□ -0.52
SREBF1-213ENST00000485080 TSHBP01222 138 aa11.81□□□□□ -0.52
SREBF1-213ENST00000485080 APCSP02743 223 aa11.81□□□□□ -0.52
SREBF1-213ENST00000485080 ESDP10768 282 aa11.81□□□□□ -0.52
SREBF1-213ENST00000485080 CKS2P33552 79 aa11.81□□□□□ -0.52
SREBF1-213ENST00000485080 CDPF1Q6NVV7 123 aa11.81□□□□□ -0.52
SREBF1-213ENST00000485080 C20orf203Q8NBC4 194 aa11.81□□□□□ -0.52
SREBF1-213ENST00000485080 TRAV9-1A0A075B6T8 112 aa11.8□□□□□ -0.52
SREBF1-213ENST00000485080 CRPP02741 224 aa11.8□□□□□ -0.52
SREBF1-213ENST00000485080 RYR1P21817 5038 aa11.79□□□□□ -0.52
SREBF1-213ENST00000485080 C16orf90A8MZG2 172 aa11.79□□□□□ -0.52
SREBF1-213ENST00000485080 LINC00269Q8N2A0 174 aa11.79□□□□□ -0.52
SREBF1-213ENST00000485080 MAPKAPK5-AS1Q8N8E1 139 aa11.79□□□□□ -0.52
SREBF1-213ENST00000485080 DEFB104AQ8WTQ1 72 aa11.79□□□□□ -0.52
SREBF1-213ENST00000485080 IGLV4-60A0A075B6I1 120 aa11.78□□□□□ -0.52
SREBF1-213ENST00000485080 IGKV2D-24A0A075B6R9 120 aa11.78□□□□□ -0.52
SREBF1-213ENST00000485080 RHEBQ15382 184 aa11.78□□□□□ -0.52
SREBF1-213ENST00000485080 C1orf43Q9BWL3 253 aa11.78□□□□□ -0.52
SREBF1-213ENST00000485080 HSPG2P98160 4391 aa11.78□□□□□ -0.52
SREBF1-213ENST00000485080 D6R8Y8 96 aa11.77□□□□□ -0.53
SREBF1-213ENST00000485080 TCAPO15273 167 aa11.77□□□□□ -0.53
SREBF1-213ENST00000485080 TNFRSF6BO95407 300 aa11.77□□□□□ -0.53
SREBF1-213ENST00000485080 ZNF25P17030 456 aaPredicted RBP11.77□□□□□ -0.53
SREBF1-213ENST00000485080 ORMDL3Q8N138 153 aa11.77□□□□□ -0.53
SREBF1-213ENST00000485080 NTN5Q8WTR8 489 aaPredicted RBP11.77□□□□□ -0.53
SREBF1-213ENST00000485080 DNAH8Q96JB1 4490 aa11.76□□□□□ -0.53
SREBF1-213ENST00000485080 TRAV8-4A0A0B4J246 113 aa11.76□□□□□ -0.53
SREBF1-213ENST00000485080 C7orf77A4D0Y5 90 aa11.76□□□□□ -0.53
SREBF1-213ENST00000485080 REG3AQ06141 175 aa11.76□□□□□ -0.53
SREBF1-213ENST00000485080 TMEM136Q6ZRR5 245 aa11.76□□□□□ -0.53
SREBF1-213ENST00000485080 Q8N814 137 aa11.76□□□□□ -0.53
SREBF1-213ENST00000485080 CLRN3Q8NCR9 226 aa11.76□□□□□ -0.53
SREBF1-213ENST00000485080 KIR2DL4Q99706 377 aa11.76□□□□□ -0.53
SREBF1-213ENST00000485080 LAMTOR2Q9Y2Q5 125 aa11.76□□□□□ -0.53
SREBF1-213ENST00000485080 FGF6P10767 208 aa11.75□□□□□ -0.53
SREBF1-213ENST00000485080 KRTAP26-1Q6PEX3 210 aa11.75□□□□□ -0.53
SREBF1-213ENST00000485080 MRPL52Q86TS9 123 aaKnown RBP11.75□□□□□ -0.53
SREBF1-213ENST00000485080 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.74□□□□□ -0.53
SREBF1-213ENST00000485080 IGKV2-29A2NJV5 120 aaPredicted RBP11.74□□□□□ -0.53
SREBF1-213ENST00000485080 PRSS47A8MTI9 375 aa11.74□□□□□ -0.53
SREBF1-213ENST00000485080 NPYP01303 97 aa11.74□□□□□ -0.53
SREBF1-213ENST00000485080 WFDC2Q14508 124 aa11.74□□□□□ -0.53
SREBF1-213ENST00000485080 SMIM2Q9BVW6 85 aa11.74□□□□□ -0.53
SREBF1-213ENST00000485080 S100PP25815 95 aa11.73□□□□□ -0.53
SREBF1-213ENST00000485080 FCER1GP30273 86 aa11.73□□□□□ -0.53
SREBF1-213ENST00000485080 AMMECR1LQ6DCA0 310 aa11.73□□□□□ -0.53
SREBF1-213ENST00000485080 PRELID3AQ96N28 172 aa11.73□□□□□ -0.53
SREBF1-213ENST00000485080 BAALCQ8WXS3 180 aa11.72□□□□□ -0.53
SREBF1-213ENST00000485080 CSDC2Q9Y534 153 aaKnown RBP11.72□□□□□ -0.53
SREBF1-213ENST00000485080 SMAGPQ0VAQ4 97 aa11.71□□□□□ -0.53
SREBF1-213ENST00000485080 RNASEKQ6P5S7 137 aaKnown RBP11.71□□□□□ -0.53
SREBF1-213ENST00000485080 CLPSL2Q6UWE3 100 aa11.71□□□□□ -0.53
SREBF1-213ENST00000485080 CDK2AP2O75956 126 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms