RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 ST20Q9HBF5 79 aa12.72□□□□□ -0.37
SNX17-206ENST00000484886 A0A1B0GW15 77 aa12.71□□□□□ -0.37
SNX17-206ENST00000484886 PPP1R2P9O14990 202 aa12.71□□□□□ -0.37
SNX17-206ENST00000484886 GAS8-AS1O95177 125 aa12.71□□□□□ -0.37
SNX17-206ENST00000484886 PNRC1Q12796 327 aaPredicted RBP12.71□□□□□ -0.37
SNX17-206ENST00000484886 MRPL54Q6P161 138 aaKnown RBP12.71□□□□□ -0.37
SNX17-206ENST00000484886 ENHOQ6UWT2 76 aa12.71□□□□□ -0.37
SNX17-206ENST00000484886 LINC00269Q8N2A0 174 aa12.71□□□□□ -0.37
SNX17-206ENST00000484886 Q8N814 137 aa12.71□□□□□ -0.37
SNX17-206ENST00000484886 BAALCQ8WXS3 180 aa12.71□□□□□ -0.37
SNX17-206ENST00000484886 KIAA1109Q2LD37 5005 aa12.71□□□□□ -0.37
SNX17-206ENST00000484886 IGLV5-52A0A0A0MRZ9 124 aa12.7□□□□□ -0.38
SNX17-206ENST00000484886 SMKR1H3BMG3 65 aa12.7□□□□□ -0.38
SNX17-206ENST00000484886 NCR2O95944 276 aa12.7□□□□□ -0.38
SNX17-206ENST00000484886 APCSP02743 223 aa12.7□□□□□ -0.38
SNX17-206ENST00000484886 TRBV6-5A0A0K0K1A5 114 aa12.69□□□□□ -0.38
SNX17-206ENST00000484886 I3L3M4 83 aa12.69□□□□□ -0.38
SNX17-206ENST00000484886 S100A8P05109 93 aa12.69□□□□□ -0.38
SNX17-206ENST00000484886 RPS10P46783 165 aaKnown RBP12.69□□□□□ -0.38
SNX17-206ENST00000484886 MIAQ16674 131 aa12.69□□□□□ -0.38
SNX17-206ENST00000484886 NTN5Q8WTR8 489 aaPredicted RBP12.69□□□□□ -0.38
SNX17-206ENST00000484886 MT-ND4LP03901 98 aa12.68□□□□□ -0.38
SNX17-206ENST00000484886 HBBP68871 147 aa12.68□□□□□ -0.38
SNX17-206ENST00000484886 WFDC2Q14508 124 aa12.68□□□□□ -0.38
SNX17-206ENST00000484886 FAM104BQ5XKR9 115 aa12.68□□□□□ -0.38
SNX17-206ENST00000484886 AMMECR1LQ6DCA0 310 aa12.68□□□□□ -0.38
SNX17-206ENST00000484886 MAPKAPK5-AS1Q8N8E1 139 aa12.68□□□□□ -0.38
SNX17-206ENST00000484886 CDK2AP2O75956 126 aa12.67□□□□□ -0.38
SNX17-206ENST00000484886 HLA-DQA1P01909 254 aa12.67□□□□□ -0.38
SNX17-206ENST00000484886 UQCC3Q6UW78 93 aa12.67□□□□□ -0.38
SNX17-206ENST00000484886 TMEM70Q9BUB7 260 aa12.67□□□□□ -0.38
SNX17-206ENST00000484886 IGLV4-60A0A075B6I1 120 aa12.66□□□□□ -0.38
SNX17-206ENST00000484886 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.66□□□□□ -0.38
SNX17-206ENST00000484886 A0A1B0GUV1 79 aa12.66□□□□□ -0.38
SNX17-206ENST00000484886 IGKV2-29A2NJV5 120 aaPredicted RBP12.66□□□□□ -0.38
SNX17-206ENST00000484886 F8W036 122 aa12.66□□□□□ -0.38
SNX17-206ENST00000484886 PPP1R17O96001 155 aa12.66□□□□□ -0.38
SNX17-206ENST00000484886 GCSHP23434 173 aa12.66□□□□□ -0.38
SNX17-206ENST00000484886 REG3AQ06141 175 aa12.66□□□□□ -0.38
SNX17-206ENST00000484886 MRPL51Q4U2R6 128 aaKnown RBP12.66□□□□□ -0.38
SNX17-206ENST00000484886 RNASEKQ6P5S7 137 aaKnown RBP12.66□□□□□ -0.38
SNX17-206ENST00000484886 C20orf203Q8NBC4 194 aa12.66□□□□□ -0.38
SNX17-206ENST00000484886 ANAPC16Q96DE5 110 aa12.66□□□□□ -0.38
SNX17-206ENST00000484886 TMEM242Q9NWH2 141 aa12.66□□□□□ -0.38
SNX17-206ENST00000484886 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.65□□□□□ -0.38
SNX17-206ENST00000484886 PRR34Q9NV39 138 aa12.65□□□□□ -0.38
SNX17-206ENST00000484886 HERC2O95714 4834 aa12.64□□□□□ -0.39
SNX17-206ENST00000484886 IGLV10-54A0A075B6I4 117 aa12.64□□□□□ -0.39
SNX17-206ENST00000484886 CKS2P33552 79 aa12.64□□□□□ -0.39
SNX17-206ENST00000484886 COMMD7Q86VX2 200 aa12.64□□□□□ -0.39
SNX17-206ENST00000484886 A0A1B0GXF2 115 aa12.63□□□□□ -0.39
SNX17-206ENST00000484886 TSHBP01222 138 aa12.63□□□□□ -0.39
SNX17-206ENST00000484886 FCER1GP30273 86 aa12.63□□□□□ -0.39
SNX17-206ENST00000484886 KRTAP10-1P60331 282 aa12.63□□□□□ -0.39
SNX17-206ENST00000484886 ATP5L2Q7Z4Y8 100 aa12.63□□□□□ -0.39
SNX17-206ENST00000484886 LRP1BQ9NZR2 4599 aa12.63□□□□□ -0.39
SNX17-206ENST00000484886 IGKV3OR2-268A0A0C4DH90 116 aa12.62□□□□□ -0.39
SNX17-206ENST00000484886 TMEM218A2RU14 115 aa12.62□□□□□ -0.39
SNX17-206ENST00000484886 H7C423 109 aa12.62□□□□□ -0.39
SNX17-206ENST00000484886 VCYO14598 125 aa12.62□□□□□ -0.39
SNX17-206ENST00000484886 FGF6P10767 208 aa12.62□□□□□ -0.39
SNX17-206ENST00000484886 POLR2KP53803 58 aaKnown RBP12.62□□□□□ -0.39
SNX17-206ENST00000484886 SUMO2P61956 95 aaKnown RBP12.62□□□□□ -0.39
SNX17-206ENST00000484886 NRACQ8N912 160 aa12.62□□□□□ -0.39
SNX17-206ENST00000484886 DNAH5Q8TE73 4624 aa12.62□□□□□ -0.39
SNX17-206ENST00000484886 TRBV27A0A0K0K1C4 114 aa12.61□□□□□ -0.39
SNX17-206ENST00000484886 LINC00862A6NCI5 91 aa12.61□□□□□ -0.39
SNX17-206ENST00000484886 ADCYAP1P18509 176 aa12.61□□□□□ -0.39
SNX17-206ENST00000484886 BTF3L4Q96K17 158 aa12.61□□□□□ -0.39
SNX17-206ENST00000484886 D6R8Y8 96 aa12.6□□□□□ -0.39
SNX17-206ENST00000484886 C14orf177Q52M58 125 aa12.6□□□□□ -0.39
SNX17-206ENST00000484886 TMEM101Q96IK0 257 aa12.6□□□□□ -0.39
SNX17-206ENST00000484886 KIR2DL4Q99706 377 aa12.6□□□□□ -0.39
SNX17-206ENST00000484886 TRAV8-4A0A0B4J246 113 aa12.59□□□□□ -0.39
SNX17-206ENST00000484886 USP17L23D6RBM5 183 aa12.59□□□□□ -0.39
SNX17-206ENST00000484886 C7orf77A4D0Y5 90 aa12.58□□□□□ -0.4
SNX17-206ENST00000484886 TNFRSF6BO95407 300 aa12.58□□□□□ -0.4
SNX17-206ENST00000484886 C20orf78Q9BR46 151 aa12.58□□□□□ -0.4
SNX17-206ENST00000484886 ESDP10768 282 aa12.57□□□□□ -0.4
SNX17-206ENST00000484886 ZNF25P17030 456 aaPredicted RBP12.57□□□□□ -0.4
SNX17-206ENST00000484886 OR5A1Q8NGJ0 315 aa12.57□□□□□ -0.4
SNX17-206ENST00000484886 RYR1P21817 5038 aa12.57□□□□□ -0.4
SNX17-206ENST00000484886 PPBPP02775 128 aa12.56□□□□□ -0.4
SNX17-206ENST00000484886 SEC11CQ9BY50 192 aa12.56□□□□□ -0.4
SNX17-206ENST00000484886 TRBV24-1A0A075B6N3 115 aa12.55□□□□□ -0.4
SNX17-206ENST00000484886 NPYP01303 97 aa12.55□□□□□ -0.4
SNX17-206ENST00000484886 KRTAP26-1Q6PEX3 210 aa12.55□□□□□ -0.4
SNX17-206ENST00000484886 ORMDL3Q8N138 153 aa12.55□□□□□ -0.4
SNX17-206ENST00000484886 DGAT2L7PQ6IED9 249 aa12.54□□□□□ -0.4
SNX17-206ENST00000484886 TMEM136Q6ZRR5 245 aa12.54□□□□□ -0.4
SNX17-206ENST00000484886 PRELID3AQ96N28 172 aa12.54□□□□□ -0.4
SNX17-206ENST00000484886 SMIM2Q9BVW6 85 aa12.54□□□□□ -0.4
SNX17-206ENST00000484886 CTDSP1Q9GZU7 261 aa12.54□□□□□ -0.4
SNX17-206ENST00000484886 SMAGPQ0VAQ4 97 aa12.53□□□□□ -0.4
SNX17-206ENST00000484886 LINC01620Q4KN68 170 aa12.53□□□□□ -0.4
SNX17-206ENST00000484886 GAGE12HA6NDE8 117 aa12.52□□□□□ -0.41
SNX17-206ENST00000484886 PHOX2AO14813 284 aa12.52□□□□□ -0.41
SNX17-206ENST00000484886 TCAPO15273 167 aa12.52□□□□□ -0.41
SNX17-206ENST00000484886 RPL32P62910 135 aaKnown RBP12.52□□□□□ -0.41
SNX17-206ENST00000484886 MRPL52Q86TS9 123 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms