RNA–Protein interactions for RNA: ENST00000484487.1

PDZRN3-209, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 3

Gene PDZRN3, Length 406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-209ENST00000484487 GAS8-AS1O95177 125 aa4.55□□□□□ -1.68
PDZRN3-209ENST00000484487 LINC00614P0C842 121 aa4.55□□□□□ -1.68
PDZRN3-209ENST00000484487 P0DMU3 169 aa4.55□□□□□ -1.68
PDZRN3-209ENST00000484487 FAM231AP0DMU4 169 aa4.55□□□□□ -1.68
PDZRN3-209ENST00000484487 FAM231CP0DMU5 169 aa4.55□□□□□ -1.68
PDZRN3-209ENST00000484487 FCER1GP30273 86 aa4.55□□□□□ -1.68
PDZRN3-209ENST00000484487 TCTAP57738 103 aa4.55□□□□□ -1.68
PDZRN3-209ENST00000484487 UBE2D3P61077 147 aa4.55□□□□□ -1.68
PDZRN3-209ENST00000484487 UBE2D2P62837 147 aa4.55□□□□□ -1.68
PDZRN3-209ENST00000484487 GAGE1Q13065 139 aa4.55□□□□□ -1.68
PDZRN3-209ENST00000484487 GAGE4Q13068 117 aa4.55□□□□□ -1.68
PDZRN3-209ENST00000484487 GAGE5Q13069 117 aa4.55□□□□□ -1.68
PDZRN3-209ENST00000484487 GAGE13Q4V321 117 aa4.55□□□□□ -1.68
PDZRN3-209ENST00000484487 ORMDL2Q53FV1 153 aa4.55□□□□□ -1.68
PDZRN3-209ENST00000484487 NIT1Q86X76 327 aa4.55□□□□□ -1.68
PDZRN3-209ENST00000484487 ATP6V0E2Q8NHE4 81 aa4.55□□□□□ -1.68
PDZRN3-209ENST00000484487 VSIG2Q96IQ7 327 aa4.55□□□□□ -1.68
PDZRN3-209ENST00000484487 KLK5Q9Y337 293 aaPredicted RBP4.55□□□□□ -1.68
PDZRN3-209ENST00000484487 TGP01266 2768 aa4.55□□□□□ -1.68
PDZRN3-209ENST00000484487 DYNC2H1Q8NCM8 4307 aaKnown RBP4.55□□□□□ -1.68
PDZRN3-209ENST00000484487 DNAH7Q8WXX0 4024 aa4.54□□□□□ -1.68
PDZRN3-209ENST00000484487 HSBP1O75506 76 aa4.54□□□□□ -1.68
PDZRN3-209ENST00000484487 IFI27P40305 119 aaPredicted RBP4.54□□□□□ -1.68
PDZRN3-209ENST00000484487 NDUFA6P56556 154 aa4.54□□□□□ -1.68
PDZRN3-209ENST00000484487 SMAGPQ0VAQ4 97 aa4.54□□□□□ -1.68
PDZRN3-209ENST00000484487 COTL1Q14019 142 aa4.54□□□□□ -1.68
PDZRN3-209ENST00000484487 LAGE3Q14657 143 aa4.54□□□□□ -1.68
PDZRN3-209ENST00000484487 COA6Q5JTJ3 125 aaKnown RBP4.54□□□□□ -1.68
PDZRN3-209ENST00000484487 RNASEKQ6P5S7 137 aaKnown RBP4.54□□□□□ -1.68
PDZRN3-209ENST00000484487 CEMP1Q6PRD7 247 aaPredicted RBP4.54□□□□□ -1.68
PDZRN3-209ENST00000484487 NEGR1Q7Z3B1 354 aa4.54□□□□□ -1.68
PDZRN3-209ENST00000484487 TMEM18Q96B42 140 aa4.54□□□□□ -1.68
PDZRN3-209ENST00000484487 GTSF1LQ9H1H1 148 aa4.54□□□□□ -1.68
PDZRN3-209ENST00000484487 AP5S1Q9NUS5 200 aa4.54□□□□□ -1.68
PDZRN3-209ENST00000484487 IGLV2-18A0A075B6J9 118 aa4.53□□□□□ -1.68
PDZRN3-209ENST00000484487 TRBV25-1A0A075B6N4 114 aa4.53□□□□□ -1.68
PDZRN3-209ENST00000484487 A0A096LPF7 62 aa4.53□□□□□ -1.68
PDZRN3-209ENST00000484487 LOC100131303A0A0U1RQF7 123 aa4.53□□□□□ -1.68
PDZRN3-209ENST00000484487 LINC01546A6NGU7 62 aa4.53□□□□□ -1.68
PDZRN3-209ENST00000484487 IGLL5B9A064 214 aa4.53□□□□□ -1.68
PDZRN3-209ENST00000484487 NUDT3O95989 172 aa4.53□□□□□ -1.68
PDZRN3-209ENST00000484487 LINC00694P0DN24 101 aa4.53□□□□□ -1.68
PDZRN3-209ENST00000484487 TIRAPP58753 221 aa4.53□□□□□ -1.68
PDZRN3-209ENST00000484487 PKIAP61925 76 aa4.53□□□□□ -1.68
PDZRN3-209ENST00000484487 IQCJQ1A5X6 159 aa4.53□□□□□ -1.68
PDZRN3-209ENST00000484487 WWC2-AS2Q96NR7 200 aa4.53□□□□□ -1.68
PDZRN3-209ENST00000484487 Q9UF83 564 aa4.53□□□□□ -1.68
PDZRN3-209ENST00000484487 IGHV1-24A0A0C4DH33 117 aa4.52□□□□□ -1.69
PDZRN3-209ENST00000484487 KRTAP4-8A0A0G2JLE6 195 aa4.52□□□□□ -1.69
PDZRN3-209ENST00000484487 H7C423 109 aa4.52□□□□□ -1.69
PDZRN3-209ENST00000484487 SERF1AO75920 110 aa4.52□□□□□ -1.69
PDZRN3-209ENST00000484487 TSHBP01222 138 aa4.52□□□□□ -1.69
PDZRN3-209ENST00000484487 HBDP02042 147 aa4.52□□□□□ -1.69
PDZRN3-209ENST00000484487 ESDP10768 282 aa4.52□□□□□ -1.69
PDZRN3-209ENST00000484487 AMTP48728 403 aa4.52□□□□□ -1.69
PDZRN3-209ENST00000484487 TRBV6-8A0A0A6YYG3 113 aa4.51□□□□□ -1.69
PDZRN3-209ENST00000484487 TRAV8-6A0A0B4J262 113 aa4.51□□□□□ -1.69
PDZRN3-209ENST00000484487 IGHV3-38A0A0C4DH36 116 aa4.51□□□□□ -1.69
PDZRN3-209ENST00000484487 UBE2L6O14933 153 aa4.51□□□□□ -1.69
PDZRN3-209ENST00000484487 S100A2P29034 98 aa4.51□□□□□ -1.69
PDZRN3-209ENST00000484487 CCL18P55774 89 aa4.51□□□□□ -1.69
PDZRN3-209ENST00000484487 LELP1Q5T871 98 aa4.51□□□□□ -1.69
PDZRN3-209ENST00000484487 LYPD5Q6UWN5 251 aa4.51□□□□□ -1.69
PDZRN3-209ENST00000484487 C20orf203Q8NBC4 194 aa4.51□□□□□ -1.69
PDZRN3-209ENST00000484487 MUC7Q8TAX7 377 aa4.51□□□□□ -1.69
PDZRN3-209ENST00000484487 URB1-AS1Q96HZ7 61 aa4.51□□□□□ -1.69
PDZRN3-209ENST00000484487 TMEM243Q9BU79 118 aa4.51□□□□□ -1.69
PDZRN3-209ENST00000484487 CYSLTR1Q9Y271 337 aa4.51□□□□□ -1.69
PDZRN3-209ENST00000484487 TMA7Q9Y2S6 64 aaKnown RBP4.51□□□□□ -1.69
PDZRN3-209ENST00000484487 C5orf52A6NGY3 159 aa4.5□□□□□ -1.69
PDZRN3-209ENST00000484487 NPSP0C0P6 89 aa4.5□□□□□ -1.69
PDZRN3-209ENST00000484487 BTF3P20290 206 aaKnown RBP4.5□□□□□ -1.69
PDZRN3-209ENST00000484487 TMEM101Q96IK0 257 aa4.5□□□□□ -1.69
PDZRN3-209ENST00000484487 PACRGQ96M98 296 aaPredicted RBP4.5□□□□□ -1.69
PDZRN3-209ENST00000484487 CHCHD5Q9BSY4 110 aa4.5□□□□□ -1.69
PDZRN3-209ENST00000484487 C3orf84H3BNL1 204 aa4.49□□□□□ -1.69
PDZRN3-209ENST00000484487 ATP5LO75964 103 aa4.49□□□□□ -1.69
PDZRN3-209ENST00000484487 LEPROTL1O95214 131 aa4.49□□□□□ -1.69
PDZRN3-209ENST00000484487 ZNF25P17030 456 aaPredicted RBP4.49□□□□□ -1.69
PDZRN3-209ENST00000484487 SNRPEP62304 92 aaKnown RBP4.49□□□□□ -1.69
PDZRN3-209ENST00000484487 PAPPA-AS1Q5QFB9 102 aa4.49□□□□□ -1.69
PDZRN3-209ENST00000484487 AMMECR1LQ6DCA0 310 aa4.49□□□□□ -1.69
PDZRN3-209ENST00000484487 DGAT2L7PQ6IED9 249 aa4.49□□□□□ -1.69
PDZRN3-209ENST00000484487 C2orf66Q6UXQ4 117 aa4.49□□□□□ -1.69
PDZRN3-209ENST00000484487 NTM-AS1Q6ZSK4 140 aa4.49□□□□□ -1.69
PDZRN3-209ENST00000484487 ERASQ7Z444 233 aa4.49□□□□□ -1.69
PDZRN3-209ENST00000484487 TOMM6Q96B49 74 aa4.49□□□□□ -1.69
PDZRN3-209ENST00000484487 TMEM141Q96I45 108 aa4.49□□□□□ -1.69
PDZRN3-209ENST00000484487 CHCHD7Q9BUK0 85 aa4.49□□□□□ -1.69
PDZRN3-209ENST00000484487 TIMM21Q9BVV7 248 aa4.49□□□□□ -1.69
PDZRN3-209ENST00000484487 SPANXA1Q9NS26 97 aa4.49□□□□□ -1.69
PDZRN3-209ENST00000484487 HSPB8Q9UJY1 196 aa4.49□□□□□ -1.69
PDZRN3-209ENST00000484487 APLNQ9ULZ1 77 aa4.49□□□□□ -1.69
PDZRN3-209ENST00000484487 PYGO1Q9Y3Y4 419 aa4.49□□□□□ -1.69
PDZRN3-209ENST00000484487 TENM2Q9NT68 2774 aa4.48□□□□□ -1.69
PDZRN3-209ENST00000484487 PLECQ15149 4684 aaKnown RBP4.48□□□□□ -1.69
PDZRN3-209ENST00000484487 A0A087WX48 190 aa4.48□□□□□ -1.69
PDZRN3-209ENST00000484487 TMEM262E9PQX1 116 aa4.48□□□□□ -1.69
PDZRN3-209ENST00000484487 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.48□□□□□ -1.69
PDZRN3-209ENST00000484487 NUPR1O60356 82 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms