RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 COTL1Q14019 142 aa18.36■□□□□ 0.53
HLA-C-207ENST00000484378 OCC1Q8TAD7 63 aa18.36■□□□□ 0.53
HLA-C-207ENST00000484378 TRAV8-4A0A0B4J246 113 aa18.35■□□□□ 0.53
HLA-C-207ENST00000484378 AKAP14Q86UN6 197 aa18.34■□□□□ 0.53
HLA-C-207ENST00000484378 C9orf163Q8N9P6 203 aa18.34■□□□□ 0.53
HLA-C-207ENST00000484378 Q6ZNX1 250 aa18.33■□□□□ 0.52
HLA-C-207ENST00000484378 CLRN3Q8NCR9 226 aa18.33■□□□□ 0.52
HLA-C-207ENST00000484378 GFRA4Q9GZZ7 299 aa18.33■□□□□ 0.52
HLA-C-207ENST00000484378 TRAV26-2A0A0B4J265 109 aa18.32■□□□□ 0.52
HLA-C-207ENST00000484378 KRTAP10-4P60372 401 aaPredicted RBP18.32■□□□□ 0.52
HLA-C-207ENST00000484378 ALKAL2Q6UX46 152 aa18.32■□□□□ 0.52
HLA-C-207ENST00000484378 GATD1Q8NB37 220 aa18.32■□□□□ 0.52
HLA-C-207ENST00000484378 KRTAP29-1A8MX34 341 aaPredicted RBP18.31■□□□□ 0.52
HLA-C-207ENST00000484378 SMIM15Q7Z3B0 74 aa18.31■□□□□ 0.52
HLA-C-207ENST00000484378 TMEM250H0YL14 139 aa18.3■□□□□ 0.52
HLA-C-207ENST00000484378 BLOC1S1P78537 153 aa18.3■□□□□ 0.52
HLA-C-207ENST00000484378 GTSF1Q8WW33 167 aa18.3■□□□□ 0.52
HLA-C-207ENST00000484378 hDV102S1A0JD36 115 aa18.29■□□□□ 0.52
HLA-C-207ENST00000484378 hCG_2014768A0A024R1R8 64 aa18.28■□□□□ 0.52
HLA-C-207ENST00000484378 GATCO43716 136 aaKnown RBP18.28■□□□□ 0.52
HLA-C-207ENST00000484378 CEBPGP53567 150 aa18.27■□□□□ 0.52
HLA-C-207ENST00000484378 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP18.27■□□□□ 0.52
HLA-C-207ENST00000484378 CNBPP62633 177 aaKnown RBP18.26■□□□□ 0.51
HLA-C-207ENST00000484378 RPL39LQ96EH5 51 aaKnown RBP18.26■□□□□ 0.51
HLA-C-207ENST00000484378 FOXA3P55318 350 aaPredicted RBP18.25■□□□□ 0.51
HLA-C-207ENST00000484378 RPL37AP61513 92 aaKnown RBP18.25■□□□□ 0.51
HLA-C-207ENST00000484378 AP5S1Q9NUS5 200 aa18.25■□□□□ 0.51
HLA-C-207ENST00000484378 A8MWL6 223 aa18.24■□□□□ 0.51
HLA-C-207ENST00000484378 SDIM1Q6ZPB5 146 aa18.24■□□□□ 0.51
HLA-C-207ENST00000484378 FAM231DQ6ZW35 169 aa18.24■□□□□ 0.51
HLA-C-207ENST00000484378 AMMECR1LQ6DCA0 310 aa18.23■□□□□ 0.51
HLA-C-207ENST00000484378 TEX261Q6UWH6 196 aa18.23■□□□□ 0.51
HLA-C-207ENST00000484378 IGKV3OR2-268A0A0C4DH90 116 aa18.22■□□□□ 0.51
HLA-C-207ENST00000484378 PANO1I0J062 215 aa18.22■□□□□ 0.51
HLA-C-207ENST00000484378 NCR2O95944 276 aa18.22■□□□□ 0.51
HLA-C-207ENST00000484378 LYPD6BQ8NI32 183 aa18.22■□□□□ 0.51
HLA-C-207ENST00000484378 TRAV16A0A0A6YYK6 109 aaPredicted RBP18.21■□□□□ 0.51
HLA-C-207ENST00000484378 APCSP02743 223 aa18.21■□□□□ 0.51
HLA-C-207ENST00000484378 CT83Q5H943 113 aa18.2■□□□□ 0.5
HLA-C-207ENST00000484378 BORCS7Q96B45 105 aa18.2■□□□□ 0.5
HLA-C-207ENST00000484378 IGHV3-64A0A075B6Q5 118 aa18.19■□□□□ 0.5
HLA-C-207ENST00000484378 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.19■□□□□ 0.5
HLA-C-207ENST00000484378 IGKV2-29A2NJV5 120 aaPredicted RBP18.19■□□□□ 0.5
HLA-C-207ENST00000484378 GAGE12HA6NDE8 117 aa18.19■□□□□ 0.5
HLA-C-207ENST00000484378 SDHAF1A6NFY7 115 aa18.19■□□□□ 0.5
HLA-C-207ENST00000484378 RNASEKQ6P5S7 137 aaKnown RBP18.19■□□□□ 0.5
HLA-C-207ENST00000484378 LRP1Q07954 4544 aaKnown RBP18.19■□□□□ 0.5
HLA-C-207ENST00000484378 SMIM7Q9BQ49 75 aa18.18■□□□□ 0.5
HLA-C-207ENST00000484378 EIF5A2Q9GZV4 153 aaKnown RBP18.18■□□□□ 0.5
HLA-C-207ENST00000484378 H7C423 109 aa18.16■□□□□ 0.5
HLA-C-207ENST00000484378 CFAP161Q6P656 301 aa18.16■□□□□ 0.5
HLA-C-207ENST00000484378 OXTP01178 125 aa18.15■□□□□ 0.5
HLA-C-207ENST00000484378 SLPIP03973 132 aa18.15■□□□□ 0.5
HLA-C-207ENST00000484378 FGF6P10767 208 aa18.15■□□□□ 0.5
HLA-C-207ENST00000484378 C15orf56Q8N910 161 aa18.15■□□□□ 0.5
HLA-C-207ENST00000484378 I3L3M4 83 aa18.14■□□□□ 0.49
HLA-C-207ENST00000484378 PMCHP20382 165 aa18.14■□□□□ 0.49
HLA-C-207ENST00000484378 CIRBPQ14011 172 aaKnown RBP18.14■□□□□ 0.49
HLA-C-207ENST00000484378 LINC01551Q86U37 167 aa18.14■□□□□ 0.49
HLA-C-207ENST00000484378 TRBV6-5A0A0K0K1A5 114 aa18.13■□□□□ 0.49
HLA-C-207ENST00000484378 TSKUQ8WUA8 353 aa18.13■□□□□ 0.49
HLA-C-207ENST00000484378 CHCHD10Q8WYQ3 142 aaPredicted RBP18.13■□□□□ 0.49
HLA-C-207ENST00000484378 A0A1B0GUT8 65 aa18.12■□□□□ 0.49
HLA-C-207ENST00000484378 HIGD1CA8MV81 97 aa18.12■□□□□ 0.49
HLA-C-207ENST00000484378 DPH3Q96FX2 82 aa18.12■□□□□ 0.49
HLA-C-207ENST00000484378 PKHD1L1Q86WI1 4243 aa18.11■□□□□ 0.49
HLA-C-207ENST00000484378 ZNF727A8MUV8 499 aa18.11■□□□□ 0.49
HLA-C-207ENST00000484378 CHTF8P0CG12 524 aa18.11■□□□□ 0.49
HLA-C-207ENST00000484378 ZNF25P17030 456 aaPredicted RBP18.11■□□□□ 0.49
HLA-C-207ENST00000484378 HIGD2BQ4VC39 106 aa18.11■□□□□ 0.49
HLA-C-207ENST00000484378 FAM210AQ96ND0 272 aa18.11■□□□□ 0.49
HLA-C-207ENST00000484378 ST20Q9HBF5 79 aa18.11■□□□□ 0.49
HLA-C-207ENST00000484378 FAT3Q8TDW7 4589 aa18.1■□□□□ 0.49
HLA-C-207ENST00000484378 NDUFS6O75380 124 aaKnown RBP18.1■□□□□ 0.49
HLA-C-207ENST00000484378 BTF3L4Q96K17 158 aa18.1■□□□□ 0.49
HLA-C-207ENST00000484378 GAS8-AS1O95177 125 aa18.09■□□□□ 0.49
HLA-C-207ENST00000484378 HNRNPA3P51991 378 aaKnown RBP18.09■□□□□ 0.49
HLA-C-207ENST00000484378 RNF185Q96GF1 192 aa18.09■□□□□ 0.49
HLA-C-207ENST00000484378 TMEM101Q96IK0 257 aa18.09■□□□□ 0.49
HLA-C-207ENST00000484378 TMEM191AQ9H0A3 160 aa18.09■□□□□ 0.49
HLA-C-207ENST00000484378 OSTCQ9NRP0 149 aa18.09■□□□□ 0.49
HLA-C-207ENST00000484378 FAM231BA6NCW3 169 aa18.08■□□□□ 0.48
HLA-C-207ENST00000484378 SPACA4Q8TDM5 124 aa18.08■□□□□ 0.48
HLA-C-207ENST00000484378 TMEM242Q9NWH2 141 aa18.08■□□□□ 0.48
HLA-C-207ENST00000484378 TSHBP01222 138 aa18.07■□□□□ 0.48
HLA-C-207ENST00000484378 SRP19P09132 144 aaKnown RBP18.07■□□□□ 0.48
HLA-C-207ENST00000484378 OR5A1Q8NGJ0 315 aa18.07■□□□□ 0.48
HLA-C-207ENST00000484378 MRAP2Q96G30 205 aa18.07■□□□□ 0.48
HLA-C-207ENST00000484378 A0A087WYN8 130 aa18.06■□□□□ 0.48
HLA-C-207ENST00000484378 RPS10P46783 165 aaKnown RBP18.06■□□□□ 0.48
HLA-C-207ENST00000484378 ESDP10768 282 aa18.05■□□□□ 0.48
HLA-C-207ENST00000484378 GVQW2A0A096LPI5 108 aaPredicted RBP18.04■□□□□ 0.48
HLA-C-207ENST00000484378 XCL1P47992 114 aa18.04■□□□□ 0.48
HLA-C-207ENST00000484378 FOXI1Q12951 378 aa18.04■□□□□ 0.48
HLA-C-207ENST00000484378 AMN1Q8IY45 258 aa18.04■□□□□ 0.48
HLA-C-207ENST00000484378 RAB4AP20338 218 aa18.03■□□□□ 0.48
HLA-C-207ENST00000484378 COX6A2Q02221 97 aa18.03■□□□□ 0.48
HLA-C-207ENST00000484378 SERTAD4-AS1Q5TG53 156 aa18.02■□□□□ 0.48
HLA-C-207ENST00000484378 V9GYV3 84 aa18.02■□□□□ 0.48
HLA-C-207ENST00000484378 TRBV27A0A0K0K1C4 114 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms