RNA–Protein interactions for RNA: ENST00000484330.5

ERCC8-206, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 3

Gene ERCC8, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-206ENST00000484330 LAMC1P11047 1609 aa-0.24□□□□□ -2.45
ERCC8-206ENST00000484330 SPEF2Q9C093 1822 aa-0.24□□□□□ -2.45
ERCC8-206ENST00000484330 CSPG4Q6UVK1 2322 aa-0.25□□□□□ -2.45
ERCC8-206ENST00000484330 WNK1Q9H4A3 2382 aa-0.25□□□□□ -2.45
ERCC8-206ENST00000484330 EP300Q09472 2414 aaPredicted RBP-0.25□□□□□ -2.45
ERCC8-206ENST00000484330 NBEAL1Q6ZS30 2694 aa-0.25□□□□□ -2.45
ERCC8-206ENST00000484330 FAM236AA0A1B0GUQ0 79 aa-0.25□□□□□ -2.45
ERCC8-206ENST00000484330 FAM236BA0A1B0GV22 79 aa-0.25□□□□□ -2.45
ERCC8-206ENST00000484330 NPFFO15130 113 aa-0.25□□□□□ -2.45
ERCC8-206ENST00000484330 IL5P05113 134 aa-0.25□□□□□ -2.45
ERCC8-206ENST00000484330 TSPAN19P0C672 248 aa-0.25□□□□□ -2.45
ERCC8-206ENST00000484330 SCGB1A1P11684 91 aa-0.25□□□□□ -2.45
ERCC8-206ENST00000484330 CBLN1P23435 193 aa-0.25□□□□□ -2.45
ERCC8-206ENST00000484330 S100A3P33764 101 aa-0.25□□□□□ -2.45
ERCC8-206ENST00000484330 SPRR2BP35325 72 aa-0.25□□□□□ -2.45
ERCC8-206ENST00000484330 CCL18P55774 89 aa-0.25□□□□□ -2.45
ERCC8-206ENST00000484330 HIST1H1AQ02539 215 aaPredicted RBP-0.25□□□□□ -2.45
ERCC8-206ENST00000484330 Q6ZUT4 128 aa-0.25□□□□□ -2.45
ERCC8-206ENST00000484330 AIF1LQ9BQI0 150 aa-0.25□□□□□ -2.45
ERCC8-206ENST00000484330 PSMG3Q9BT73 122 aaPredicted RBP-0.25□□□□□ -2.45
ERCC8-206ENST00000484330 TP53AIP1Q9HCN2 124 aa-0.25□□□□□ -2.45
ERCC8-206ENST00000484330 MRPL40Q9NQ50 206 aaKnown RBP-0.25□□□□□ -2.45
ERCC8-206ENST00000484330 SCN3BQ9NY72 215 aa-0.25□□□□□ -2.45
ERCC8-206ENST00000484330 ARHGEF10O15013 1369 aa-0.25□□□□□ -2.45
ERCC8-206ENST00000484330 FHAD1B1AJZ9 1412 aa-0.25□□□□□ -2.45
ERCC8-206ENST00000484330 MYOM3Q5VTT5 1437 aa-0.25□□□□□ -2.45
ERCC8-206ENST00000484330 MRC1P22897 1456 aa-0.25□□□□□ -2.45
ERCC8-206ENST00000484330 TSC2P49815 1807 aa-0.25□□□□□ -2.45
ERCC8-206ENST00000484330 FLGP20930 4061 aaPredicted RBP-0.26□□□□□ -2.45
ERCC8-206ENST00000484330 USF3Q68DE3 2245 aa-0.26□□□□□ -2.45
ERCC8-206ENST00000484330 SBF2Q86WG5 1849 aa-0.26□□□□□ -2.45
ERCC8-206ENST00000484330 DOCK2Q92608 1830 aa-0.26□□□□□ -2.45
ERCC8-206ENST00000484330 PAPPAQ13219 1627 aa-0.26□□□□□ -2.45
ERCC8-206ENST00000484330 ZNF518AQ6AHZ1 1483 aa-0.26□□□□□ -2.45
ERCC8-206ENST00000484330 IFT140Q96RY7 1462 aa-0.26□□□□□ -2.45
ERCC8-206ENST00000484330 J3QR89 54 aa-0.26□□□□□ -2.45
ERCC8-206ENST00000484330 M0R129 80 aa-0.26□□□□□ -2.45
ERCC8-206ENST00000484330 IGLC6P0CF74 106 aa-0.26□□□□□ -2.45
ERCC8-206ENST00000484330 RRAS2P62070 204 aaPredicted RBP-0.26□□□□□ -2.45
ERCC8-206ENST00000484330 UBE2G1P62253 170 aa-0.26□□□□□ -2.45
ERCC8-206ENST00000484330 CCL8P80075 99 aa-0.26□□□□□ -2.45
ERCC8-206ENST00000484330 DCDP81605 110 aaKnown RBP-0.26□□□□□ -2.45
ERCC8-206ENST00000484330 ALX1Q15699 326 aa-0.26□□□□□ -2.45
ERCC8-206ENST00000484330 KRTAP19-7Q3SYF9 63 aa-0.26□□□□□ -2.45
ERCC8-206ENST00000484330 SCIMPQ6UWF3 145 aa-0.26□□□□□ -2.45
ERCC8-206ENST00000484330 TAC4Q86UU9 113 aa-0.26□□□□□ -2.45
ERCC8-206ENST00000484330 SPTSSBQ8NFR3 76 aa-0.26□□□□□ -2.45
ERCC8-206ENST00000484330 SMIM4Q8WVI0 70 aa-0.26□□□□□ -2.45
ERCC8-206ENST00000484330 SPTSSAQ969W0 71 aa-0.26□□□□□ -2.45
ERCC8-206ENST00000484330 NPVFQ9HCQ7 196 aa-0.26□□□□□ -2.45
ERCC8-206ENST00000484330 GSKIPQ9P0R6 139 aa-0.26□□□□□ -2.45
ERCC8-206ENST00000484330 LINC00312Q9Y6C7 94 aa-0.26□□□□□ -2.45
ERCC8-206ENST00000484330 CEP152O94986 1710 aa-0.27□□□□□ -2.45
ERCC8-206ENST00000484330 NF1P21359 2839 aa-0.27□□□□□ -2.45
ERCC8-206ENST00000484330 WDR7Q9Y4E6 1490 aa-0.27□□□□□ -2.45
ERCC8-206ENST00000484330 FXYD6-FXYD2A0A087WZ82 144 aa-0.27□□□□□ -2.45
ERCC8-206ENST00000484330 TRBV6-1A0A0K0K1D8 114 aa-0.27□□□□□ -2.45
ERCC8-206ENST00000484330 SPAARA0A1B0GVQ0 90 aa-0.27□□□□□ -2.45
ERCC8-206ENST00000484330 I3L2K1 104 aa-0.27□□□□□ -2.45
ERCC8-206ENST00000484330 K7EQZ3 153 aa-0.27□□□□□ -2.45
ERCC8-206ENST00000484330 BCE1O60756 84 aa-0.27□□□□□ -2.45
ERCC8-206ENST00000484330 PITX3O75364 302 aa-0.27□□□□□ -2.45
ERCC8-206ENST00000484330 SNCGO76070 127 aa-0.27□□□□□ -2.45
ERCC8-206ENST00000484330 NDUFB6O95139 128 aa-0.27□□□□□ -2.45
ERCC8-206ENST00000484330 LINC00694P0DN24 101 aa-0.27□□□□□ -2.45
ERCC8-206ENST00000484330 HAMPP81172 84 aa-0.27□□□□□ -2.45
ERCC8-206ENST00000484330 COX17Q14061 63 aa-0.27□□□□□ -2.45
ERCC8-206ENST00000484330 MYO7BQ6PIF6 2116 aa-0.27□□□□□ -2.45
ERCC8-206ENST00000484330 SMIM3Q9BZL3 60 aa-0.27□□□□□ -2.45
ERCC8-206ENST00000484330 AGPAT4-IT1Q9H0P7 198 aa-0.27□□□□□ -2.45
ERCC8-206ENST00000484330 R4GMQ9 66 aa-0.27□□□□□ -2.45
ERCC8-206ENST00000484330 LAMA5O15230 3695 aa-0.27□□□□□ -2.45
ERCC8-206ENST00000484330 CHD8Q9HCK8 2581 aa-0.27□□□□□ -2.45
ERCC8-206ENST00000484330 PATJQ8NI35 1801 aa-0.27□□□□□ -2.45
ERCC8-206ENST00000484330 KDM5AP29375 1690 aaKnown RBP-0.27□□□□□ -2.45
ERCC8-206ENST00000484330 KIF21AQ7Z4S6 1674 aa-0.27□□□□□ -2.45
ERCC8-206ENST00000484330 ANKRD30AQ9BXX3 1397 aa-0.28□□□□□ -2.45
ERCC8-206ENST00000484330 DOCK1Q14185 1865 aa-0.28□□□□□ -2.45
ERCC8-206ENST00000484330 ZNF236Q9UL36 1845 aa-0.28□□□□□ -2.45
ERCC8-206ENST00000484330 CTXND1A0A1B0GTU2 59 aa-0.28□□□□□ -2.45
ERCC8-206ENST00000484330 M0R2Z0 102 aa-0.28□□□□□ -2.45
ERCC8-206ENST00000484330 SIX6O95475 246 aa-0.28□□□□□ -2.45
ERCC8-206ENST00000484330 PPP1R17O96001 155 aa-0.28□□□□□ -2.45
ERCC8-206ENST00000484330 GUCA1AP43080 201 aaPredicted RBP-0.28□□□□□ -2.45
ERCC8-206ENST00000484330 CKS1BP61024 79 aa-0.28□□□□□ -2.45
ERCC8-206ENST00000484330 B2MP61769 119 aa-0.28□□□□□ -2.45
ERCC8-206ENST00000484330 PIGYQ3MUY2 71 aa-0.28□□□□□ -2.45
ERCC8-206ENST00000484330 S100A7L2Q5SY68 101 aa-0.28□□□□□ -2.45
ERCC8-206ENST00000484330 PYDC1Q8WXC3 89 aa-0.28□□□□□ -2.45
ERCC8-206ENST00000484330 TCEAL4Q96EI5 215 aa-0.28□□□□□ -2.45
ERCC8-206ENST00000484330 SEC11CQ9BY50 192 aa-0.28□□□□□ -2.45
ERCC8-206ENST00000484330 LENEPQ9Y5L5 61 aa-0.28□□□□□ -2.45
ERCC8-206ENST00000484330 ZFHX3Q15911 3703 aa-0.28□□□□□ -2.45
ERCC8-206ENST00000484330 RIMS1Q86UR5 1692 aaKnown RBP-0.28□□□□□ -2.45
ERCC8-206ENST00000484330 PI4KAP42356 2102 aa-0.28□□□□□ -2.45
ERCC8-206ENST00000484330 HERC1Q15751 4861 aa-0.29□□□□□ -2.46
ERCC8-206ENST00000484330 GRIN2AQ12879 1464 aa-0.29□□□□□ -2.46
ERCC8-206ENST00000484330 ARAP2Q8WZ64 1704 aa-0.29□□□□□ -2.46
ERCC8-206ENST00000484330 TGP01266 2768 aa-0.29□□□□□ -2.46
ERCC8-206ENST00000484330 TRAV13-2A0A0B4J235 113 aa-0.29□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms