RNA–Protein interactions for RNA: ENST00000483981.2

SHANK1-208, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 3

Gene SHANK1, Length 422 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-208ENST00000483981 CAMPP49913 170 aa8.14□□□□□ -1.11
SHANK1-208ENST00000483981 PKIAP61925 76 aa8.14□□□□□ -1.11
SHANK1-208ENST00000483981 COTL1Q14019 142 aa8.14□□□□□ -1.11
SHANK1-208ENST00000483981 WFDC2Q14508 124 aa8.14□□□□□ -1.11
SHANK1-208ENST00000483981 MRPL51Q4U2R6 128 aaKnown RBP8.14□□□□□ -1.11
SHANK1-208ENST00000483981 C10orf91Q5T1B1 145 aa8.14□□□□□ -1.11
SHANK1-208ENST00000483981 COMMD7Q86VX2 200 aa8.14□□□□□ -1.11
SHANK1-208ENST00000483981 C20orf203Q8NBC4 194 aa8.14□□□□□ -1.11
SHANK1-208ENST00000483981 UBE2WQ96B02 151 aa8.14□□□□□ -1.11
SHANK1-208ENST00000483981 ANAPC16Q96DE5 110 aa8.14□□□□□ -1.11
SHANK1-208ENST00000483981 TMEM243Q9BU79 118 aa8.14□□□□□ -1.11
SHANK1-208ENST00000483981 TMEM70Q9BUB7 260 aa8.14□□□□□ -1.11
SHANK1-208ENST00000483981 PGPEP1Q9NXJ5 209 aa8.14□□□□□ -1.11
SHANK1-208ENST00000483981 TRBV27A0A0K0K1C4 114 aa8.13□□□□□ -1.11
SHANK1-208ENST00000483981 C16orf90A8MZG2 172 aa8.13□□□□□ -1.11
SHANK1-208ENST00000483981 SMKR1H3BMG3 65 aa8.13□□□□□ -1.11
SHANK1-208ENST00000483981 TSHBP01222 138 aa8.13□□□□□ -1.11
SHANK1-208ENST00000483981 FUSP35637 526 aaKnown RBP eCLIP8.13□□□□□ -1.11
SHANK1-208ENST00000483981 MRPL54Q6P161 138 aaKnown RBP8.13□□□□□ -1.11
SHANK1-208ENST00000483981 KRTAP26-1Q6PEX3 210 aa8.13□□□□□ -1.11
SHANK1-208ENST00000483981 TM2D2Q9BX73 214 aa8.13□□□□□ -1.11
SHANK1-208ENST00000483981 SEC11CQ9BY50 192 aa8.13□□□□□ -1.11
SHANK1-208ENST00000483981 IGLV4-60A0A075B6I1 120 aa8.12□□□□□ -1.11
SHANK1-208ENST00000483981 TRBV24-1A0A075B6N3 115 aa8.12□□□□□ -1.11
SHANK1-208ENST00000483981 F8W036 122 aa8.12□□□□□ -1.11
SHANK1-208ENST00000483981 I3L3M4 83 aa8.12□□□□□ -1.11
SHANK1-208ENST00000483981 PSCAO43653 123 aa8.12□□□□□ -1.11
SHANK1-208ENST00000483981 ANGP03950 147 aaKnown RBP8.12□□□□□ -1.11
SHANK1-208ENST00000483981 ESDP10768 282 aa8.12□□□□□ -1.11
SHANK1-208ENST00000483981 AMTP48728 403 aa8.12□□□□□ -1.11
SHANK1-208ENST00000483981 HBBP68871 147 aa8.12□□□□□ -1.11
SHANK1-208ENST00000483981 Q0VG73 95 aa8.12□□□□□ -1.11
SHANK1-208ENST00000483981 ATP5L2Q7Z4Y8 100 aa8.12□□□□□ -1.11
SHANK1-208ENST00000483981 ST20Q9HBF5 79 aa8.12□□□□□ -1.11
SHANK1-208ENST00000483981 COX11Q9Y6N1 276 aa8.12□□□□□ -1.11
SHANK1-208ENST00000483981 EREGO14944 169 aa8.11□□□□□ -1.11
SHANK1-208ENST00000483981 CDPF1Q6NVV7 123 aa8.11□□□□□ -1.11
SHANK1-208ENST00000483981 LINC00269Q8N2A0 174 aa8.11□□□□□ -1.11
SHANK1-208ENST00000483981 Q8N814 137 aa8.11□□□□□ -1.11
SHANK1-208ENST00000483981 RYR1P21817 5038 aa8.1□□□□□ -1.11
SHANK1-208ENST00000483981 APOBP04114 4563 aaKnown RBP8.1□□□□□ -1.11
SHANK1-208ENST00000483981 H7C423 109 aa8.1□□□□□ -1.11
SHANK1-208ENST00000483981 PPP1R17O96001 155 aa8.1□□□□□ -1.11
SHANK1-208ENST00000483981 S100A8P05109 93 aa8.1□□□□□ -1.11
SHANK1-208ENST00000483981 PMCHP20382 165 aa8.1□□□□□ -1.11
SHANK1-208ENST00000483981 RMI2Q96E14 147 aa8.1□□□□□ -1.11
SHANK1-208ENST00000483981 IMMP2LQ96T52 175 aa8.1□□□□□ -1.11
SHANK1-208ENST00000483981 IGKV2D-24A0A075B6R9 120 aa8.09□□□□□ -1.11
SHANK1-208ENST00000483981 VCYO14598 125 aa8.09□□□□□ -1.11
SHANK1-208ENST00000483981 SUMO2P61956 95 aaKnown RBP8.09□□□□□ -1.11
SHANK1-208ENST00000483981 MIAQ16674 131 aa8.09□□□□□ -1.11
SHANK1-208ENST00000483981 BAALCQ8WXS3 180 aa8.09□□□□□ -1.11
SHANK1-208ENST00000483981 KRTAP17-1Q9BYP8 105 aa8.09□□□□□ -1.11
SHANK1-208ENST00000483981 CTDSP1Q9GZU7 261 aa8.09□□□□□ -1.11
SHANK1-208ENST00000483981 TMEM242Q9NWH2 141 aa8.09□□□□□ -1.11
SHANK1-208ENST00000483981 CARHSP1Q9Y2V2 147 aaKnown RBP8.09□□□□□ -1.11
SHANK1-208ENST00000483981 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.08□□□□□ -1.12
SHANK1-208ENST00000483981 IGKV2-29A2NJV5 120 aaPredicted RBP8.08□□□□□ -1.12
SHANK1-208ENST00000483981 TNFRSF6BO95407 300 aa8.08□□□□□ -1.12
SHANK1-208ENST00000483981 APCSP02743 223 aa8.08□□□□□ -1.12
SHANK1-208ENST00000483981 CKS2P33552 79 aa8.08□□□□□ -1.12
SHANK1-208ENST00000483981 RPL32P62910 135 aaKnown RBP8.08□□□□□ -1.12
SHANK1-208ENST00000483981 REG3AQ06141 175 aa8.08□□□□□ -1.12
SHANK1-208ENST00000483981 CLPSL2Q6UWE3 100 aa8.08□□□□□ -1.12
SHANK1-208ENST00000483981 C20orf78Q9BR46 151 aa8.08□□□□□ -1.12
SHANK1-208ENST00000483981 C1orf43Q9BWL3 253 aa8.08□□□□□ -1.12
SHANK1-208ENST00000483981 D6R8Y8 96 aa8.07□□□□□ -1.12
SHANK1-208ENST00000483981 UBE2L6O14933 153 aa8.07□□□□□ -1.12
SHANK1-208ENST00000483981 LECT2O14960 151 aa8.07□□□□□ -1.12
SHANK1-208ENST00000483981 CDK2AP2O75956 126 aa8.07□□□□□ -1.12
SHANK1-208ENST00000483981 NPYP01303 97 aa8.07□□□□□ -1.12
SHANK1-208ENST00000483981 CRPP02741 224 aa8.07□□□□□ -1.12
SHANK1-208ENST00000483981 FGF6P10767 208 aa8.07□□□□□ -1.12
SHANK1-208ENST00000483981 KRTAP10-1P60331 282 aa8.07□□□□□ -1.12
SHANK1-208ENST00000483981 NTN5Q8WTR8 489 aaPredicted RBP8.07□□□□□ -1.12
SHANK1-208ENST00000483981 BTF3L4Q96K17 158 aa8.07□□□□□ -1.12
SHANK1-208ENST00000483981 HSPG2P98160 4391 aa8.07□□□□□ -1.12
SHANK1-208ENST00000483981 C7orf77A4D0Y5 90 aa8.06□□□□□ -1.12
SHANK1-208ENST00000483981 PHOX2AO14813 284 aa8.06□□□□□ -1.12
SHANK1-208ENST00000483981 PPBPP02775 128 aa8.06□□□□□ -1.12
SHANK1-208ENST00000483981 TRAV8-4A0A0B4J246 113 aa8.05□□□□□ -1.12
SHANK1-208ENST00000483981 PRSS47A8MTI9 375 aa8.05□□□□□ -1.12
SHANK1-208ENST00000483981 ZNF25P17030 456 aaPredicted RBP8.05□□□□□ -1.12
SHANK1-208ENST00000483981 TMEM136Q6ZRR5 245 aa8.05□□□□□ -1.12
SHANK1-208ENST00000483981 MRPL52Q86TS9 123 aaKnown RBP8.05□□□□□ -1.12
SHANK1-208ENST00000483981 TRAV9-1A0A075B6T8 112 aa8.04□□□□□ -1.12
SHANK1-208ENST00000483981 IGLV5-52A0A0A0MRZ9 124 aa8.04□□□□□ -1.12
SHANK1-208ENST00000483981 ORMDL3Q8N138 153 aa8.04□□□□□ -1.12
SHANK1-208ENST00000483981 CLRN3Q8NCR9 226 aa8.04□□□□□ -1.12
SHANK1-208ENST00000483981 SMIM2Q9BVW6 85 aa8.04□□□□□ -1.12
SHANK1-208ENST00000483981 IGLV10-54A0A075B6I4 117 aa8.03□□□□□ -1.12
SHANK1-208ENST00000483981 GCSHP23434 173 aa8.03□□□□□ -1.12
SHANK1-208ENST00000483981 AMMECR1LQ6DCA0 310 aa8.03□□□□□ -1.12
SHANK1-208ENST00000483981 RNASEKQ6P5S7 137 aaKnown RBP8.03□□□□□ -1.12
SHANK1-208ENST00000483981 FAM104AQ969W3 186 aa8.03□□□□□ -1.12
SHANK1-208ENST00000483981 PRELID3AQ96N28 172 aa8.03□□□□□ -1.12
SHANK1-208ENST00000483981 KIR2DL4Q99706 377 aa8.03□□□□□ -1.12
SHANK1-208ENST00000483981 CDC42SE2Q9NRR3 84 aa8.03□□□□□ -1.12
SHANK1-208ENST00000483981 CSDC2Q9Y534 153 aaKnown RBP8.03□□□□□ -1.12
SHANK1-208ENST00000483981 USP17L23D6RBM5 183 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms