RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 STOML3Q8TAV4 291 aa7.9□□□□□ -1.14
UBR4-213ENST00000483922 CHCHD10Q8WYQ3 142 aaPredicted RBP7.9□□□□□ -1.14
UBR4-213ENST00000483922 BORCS7-ASMTA0A0B4J1R7 106 aa7.89□□□□□ -1.15
UBR4-213ENST00000483922 Q6ZRP5 223 aa7.89□□□□□ -1.15
UBR4-213ENST00000483922 TMUB2Q71RG4 321 aa7.89□□□□□ -1.15
UBR4-213ENST00000483922 NIT2Q9NQR4 276 aa7.89□□□□□ -1.15
UBR4-213ENST00000483922 A0A1W2PNN7 141 aa7.88□□□□□ -1.15
UBR4-213ENST00000483922 S100A9P06702 114 aaKnown RBP7.88□□□□□ -1.15
UBR4-213ENST00000483922 A0A1B0GV50 99 aa7.87□□□□□ -1.15
UBR4-213ENST00000483922 AMTP48728 403 aa7.87□□□□□ -1.15
UBR4-213ENST00000483922 Q6ZNX1 250 aa7.87□□□□□ -1.15
UBR4-213ENST00000483922 MBD3L1Q8WWY6 194 aa7.87□□□□□ -1.15
UBR4-213ENST00000483922 TPPP3Q9BW30 176 aa7.87□□□□□ -1.15
UBR4-213ENST00000483922 FXYD6-FXYD2A0A087WZ82 144 aa7.86□□□□□ -1.15
UBR4-213ENST00000483922 C19orf71A6NCJ1 209 aa7.86□□□□□ -1.15
UBR4-213ENST00000483922 GIPP09681 153 aaPredicted RBP7.86□□□□□ -1.15
UBR4-213ENST00000483922 DEFA1P59665 94 aa7.86□□□□□ -1.15
UBR4-213ENST00000483922 FER1L6-AS1Q8NA97 138 aa7.86□□□□□ -1.15
UBR4-213ENST00000483922 MED28Q9H204 178 aa7.86□□□□□ -1.15
UBR4-213ENST00000483922 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.85□□□□□ -1.15
UBR4-213ENST00000483922 IGKV2-29A2NJV5 120 aaPredicted RBP7.85□□□□□ -1.15
UBR4-213ENST00000483922 UBE2L6O14933 153 aa7.85□□□□□ -1.15
UBR4-213ENST00000483922 NTF3P20783 257 aa7.85□□□□□ -1.15
UBR4-213ENST00000483922 RPL35P42766 123 aaKnown RBP7.85□□□□□ -1.15
UBR4-213ENST00000483922 COTL1Q14019 142 aa7.85□□□□□ -1.15
UBR4-213ENST00000483922 GATD1Q8NB37 220 aa7.85□□□□□ -1.15
UBR4-213ENST00000483922 SFT2D1Q8WV19 159 aa7.85□□□□□ -1.15
UBR4-213ENST00000483922 TRAV26-2A0A0B4J265 109 aa7.84□□□□□ -1.15
UBR4-213ENST00000483922 LYZL1Q6UWQ5 148 aa7.84□□□□□ -1.15
UBR4-213ENST00000483922 PRR26Q8N8Z3 221 aa7.84□□□□□ -1.15
UBR4-213ENST00000483922 LINC00474Q9P2X8 69 aa7.84□□□□□ -1.15
UBR4-213ENST00000483922 PSORS1C2Q9UIG4 136 aa7.84□□□□□ -1.15
UBR4-213ENST00000483922 FAM231BA6NCW3 169 aa7.83□□□□□ -1.16
UBR4-213ENST00000483922 CCL20P78556 96 aa7.83□□□□□ -1.16
UBR4-213ENST00000483922 OR2D3Q8NGH3 330 aa7.83□□□□□ -1.16
UBR4-213ENST00000483922 RAB19A4D1S5 217 aa7.82□□□□□ -1.16
UBR4-213ENST00000483922 FGF6P10767 208 aa7.82□□□□□ -1.16
UBR4-213ENST00000483922 XCL1P47992 114 aa7.82□□□□□ -1.16
UBR4-213ENST00000483922 PTTG1IPP53801 180 aa7.82□□□□□ -1.16
UBR4-213ENST00000483922 FOXA3P55318 350 aaPredicted RBP7.82□□□□□ -1.16
UBR4-213ENST00000483922 CACNG7P62955 275 aa7.82□□□□□ -1.16
UBR4-213ENST00000483922 FAM213BQ8TBF2 198 aa7.82□□□□□ -1.16
UBR4-213ENST00000483922 RPL39LQ96EH5 51 aaKnown RBP7.82□□□□□ -1.16
UBR4-213ENST00000483922 CARD19Q96LW7 228 aa7.82□□□□□ -1.16
UBR4-213ENST00000483922 LINC00959A0A1B0GUT2 108 aa7.81□□□□□ -1.16
UBR4-213ENST00000483922 CCL25O15444 150 aa7.81□□□□□ -1.16
UBR4-213ENST00000483922 LCE2AQ5TA79 106 aaPredicted RBP7.81□□□□□ -1.16
UBR4-213ENST00000483922 RNASEKQ6P5S7 137 aaKnown RBP7.81□□□□□ -1.16
UBR4-213ENST00000483922 KRTAP11-1Q8IUC1 163 aa7.81□□□□□ -1.16
UBR4-213ENST00000483922 KCNRGQ8N5I3 272 aa7.81□□□□□ -1.16
UBR4-213ENST00000483922 OR5A1Q8NGJ0 315 aa7.81□□□□□ -1.16
UBR4-213ENST00000483922 IGHV1-58A0A0C4DH39 117 aa7.8□□□□□ -1.16
UBR4-213ENST00000483922 F2Z2F3 143 aa7.8□□□□□ -1.16
UBR4-213ENST00000483922 ARPC5O15511 151 aa7.8□□□□□ -1.16
UBR4-213ENST00000483922 SYCNQ0VAF6 134 aa7.8□□□□□ -1.16
UBR4-213ENST00000483922 GAGE2BQ13066 116 aa7.8□□□□□ -1.16
UBR4-213ENST00000483922 CENPWQ5EE01 88 aa7.8□□□□□ -1.16
UBR4-213ENST00000483922 C9orf62Q8N4C0 152 aa7.8□□□□□ -1.16
UBR4-213ENST00000483922 C11orf52Q96A22 123 aa7.8□□□□□ -1.16
UBR4-213ENST00000483922 TRBV20OR9-2A0A075B6H5 130 aa7.79□□□□□ -1.16
UBR4-213ENST00000483922 PFDN1O60925 122 aa7.79□□□□□ -1.16
UBR4-213ENST00000483922 TRGC1P0CF51 173 aa7.79□□□□□ -1.16
UBR4-213ENST00000483922 RPS20P60866 119 aaKnown RBP7.79□□□□□ -1.16
UBR4-213ENST00000483922 AMMECR1LQ6DCA0 310 aa7.79□□□□□ -1.16
UBR4-213ENST00000483922 PHF5AQ7RTV0 110 aaKnown RBP7.79□□□□□ -1.16
UBR4-213ENST00000483922 ZNF664Q8N3J9 261 aa7.79□□□□□ -1.16
UBR4-213ENST00000483922 SMLR1H3BR10 107 aa7.78□□□□□ -1.16
UBR4-213ENST00000483922 H7C423 109 aa7.78□□□□□ -1.16
UBR4-213ENST00000483922 BCL2P10415 239 aa7.78□□□□□ -1.16
UBR4-213ENST00000483922 ESDP10768 282 aa7.78□□□□□ -1.16
UBR4-213ENST00000483922 C9orf116Q5BN46 136 aaPredicted RBP7.78□□□□□ -1.16
UBR4-213ENST00000483922 NUP35Q8NFH5 326 aa7.78□□□□□ -1.16
UBR4-213ENST00000483922 CNFNQ9BYD5 112 aa7.78□□□□□ -1.16
UBR4-213ENST00000483922 IGLV4-69A0A075B6H9 119 aa7.77□□□□□ -1.17
UBR4-213ENST00000483922 KRTAP9-6A0A140TA67 174 aa7.77□□□□□ -1.17
UBR4-213ENST00000483922 NCR2O95944 276 aa7.77□□□□□ -1.17
UBR4-213ENST00000483922 KRTAP1-4P0C5Y4 121 aa7.77□□□□□ -1.17
UBR4-213ENST00000483922 CTRLP40313 264 aa7.77□□□□□ -1.17
UBR4-213ENST00000483922 TWIST1Q15672 202 aa7.77□□□□□ -1.17
UBR4-213ENST00000483922 C1orf137Q5JT78 98 aa7.77□□□□□ -1.17
UBR4-213ENST00000483922 NUDT10Q8NFP7 164 aa7.77□□□□□ -1.17
UBR4-213ENST00000483922 NUDT11Q96G61 164 aa7.77□□□□□ -1.17
UBR4-213ENST00000483922 LOC107984640A0A0U1RRK4 108 aa7.76□□□□□ -1.17
UBR4-213ENST00000483922 SDHAF1A6NFY7 115 aa7.76□□□□□ -1.17
UBR4-213ENST00000483922 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.76□□□□□ -1.17
UBR4-213ENST00000483922 IFNA1P01562 189 aa7.76□□□□□ -1.17
UBR4-213ENST00000483922 H2AFB1P0C5Y9 115 aa7.76□□□□□ -1.17
UBR4-213ENST00000483922 MEF2BQ02080 365 aaPredicted RBP7.76□□□□□ -1.17
UBR4-213ENST00000483922 CDC42SE2Q9NRR3 84 aa7.76□□□□□ -1.17
UBR4-213ENST00000483922 ZNF561-AS1K7EIQ3 104 aa7.75□□□□□ -1.17
UBR4-213ENST00000483922 APCSP02743 223 aa7.75□□□□□ -1.17
UBR4-213ENST00000483922 MT-ND6P03923 174 aa7.75□□□□□ -1.17
UBR4-213ENST00000483922 IGLV7-43P04211 117 aa7.75□□□□□ -1.17
UBR4-213ENST00000483922 CAMPP49913 170 aa7.75□□□□□ -1.17
UBR4-213ENST00000483922 CD164L2Q6UWJ8 174 aa7.75□□□□□ -1.17
UBR4-213ENST00000483922 MUC17Q685J3 4493 aa7.74□□□□□ -1.17
UBR4-213ENST00000483922 UMAD1C9J7I0 102 aa7.74□□□□□ -1.17
UBR4-213ENST00000483922 TSHBP01222 138 aa7.74□□□□□ -1.17
UBR4-213ENST00000483922 ZNF25P17030 456 aaPredicted RBP7.74□□□□□ -1.17
UBR4-213ENST00000483922 OPRPNQ99935 248 aaPredicted RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms