RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 SCGB3A1Q96QR1 104 aa18.75■□□□□ 0.59
SHOX2-204ENST00000483851 NMUP48645 174 aa18.74■□□□□ 0.59
SHOX2-204ENST00000483851 TMEM97Q5BJF2 176 aa18.74■□□□□ 0.59
SHOX2-204ENST00000483851 NEXN-AS1Q8NBZ9 246 aa18.74■□□□□ 0.59
SHOX2-204ENST00000483851 STAB1Q9NY15 2570 aa18.74■□□□□ 0.59
SHOX2-204ENST00000483851 TRGV2A0A075B6R0 118 aa18.73■□□□□ 0.59
SHOX2-204ENST00000483851 TAX1BP3O14907 124 aa18.73■□□□□ 0.59
SHOX2-204ENST00000483851 LINC00612Q8N6U2 182 aa18.73■□□□□ 0.59
SHOX2-204ENST00000483851 KRTAP10-11P60412 298 aa18.73■□□□□ 0.59
SHOX2-204ENST00000483851 ERASQ7Z444 233 aa18.73■□□□□ 0.59
SHOX2-204ENST00000483851 TRRAPQ9Y4A5 3859 aa18.73■□□□□ 0.59
SHOX2-204ENST00000483851 GAGE12BA1L429 117 aa18.72■□□□□ 0.59
SHOX2-204ENST00000483851 GAGE7O76087 117 aa18.72■□□□□ 0.59
SHOX2-204ENST00000483851 GAGE12FP0CL80 117 aa18.72■□□□□ 0.59
SHOX2-204ENST00000483851 GAGE12GP0CL81 117 aa18.72■□□□□ 0.59
SHOX2-204ENST00000483851 GAGE12IP0CL82 117 aa18.72■□□□□ 0.59
SHOX2-204ENST00000483851 ZC2HC1BQ5TFG8 222 aa18.72■□□□□ 0.59
SHOX2-204ENST00000483851 TSHBP01222 138 aa18.71■□□□□ 0.59
SHOX2-204ENST00000483851 P0DMU3 169 aa18.71■□□□□ 0.59
SHOX2-204ENST00000483851 FAM231AP0DMU4 169 aa18.71■□□□□ 0.59
SHOX2-204ENST00000483851 FAM231CP0DMU5 169 aa18.71■□□□□ 0.59
SHOX2-204ENST00000483851 F8VRH5 84 aa18.71■□□□□ 0.59
SHOX2-204ENST00000483851 PLNP26678 52 aa18.71■□□□□ 0.59
SHOX2-204ENST00000483851 DEFB135Q30KP9 77 aa18.71■□□□□ 0.59
SHOX2-204ENST00000483851 K7EQD1 137 aa18.69■□□□□ 0.58
SHOX2-204ENST00000483851 BAALCQ8WXS3 180 aa18.69■□□□□ 0.58
SHOX2-204ENST00000483851 RNF183Q96D59 192 aa18.69■□□□□ 0.58
SHOX2-204ENST00000483851 LYRM9A8MSI8 78 aa18.69■□□□□ 0.58
SHOX2-204ENST00000483851 MIFP14174 115 aa18.69■□□□□ 0.58
SHOX2-204ENST00000483851 SEC11AP67812 179 aa18.69■□□□□ 0.58
SHOX2-204ENST00000483851 HSD52Q0P140 79 aa18.69■□□□□ 0.58
SHOX2-204ENST00000483851 OR11H2Q8NH07 326 aa18.69■□□□□ 0.58
SHOX2-204ENST00000483851 HIGD1BQ9P298 99 aa18.69■□□□□ 0.58
SHOX2-204ENST00000483851 TRBV6-4A0A1B0GX49 114 aa18.68■□□□□ 0.58
SHOX2-204ENST00000483851 TMEM141Q96I45 108 aa18.67■□□□□ 0.58
SHOX2-204ENST00000483851 TIMM17AQ99595 171 aa18.67■□□□□ 0.58
SHOX2-204ENST00000483851 TP53TG1Q9Y2A0 90 aa18.67■□□□□ 0.58
SHOX2-204ENST00000483851 CHTOPQ9Y3Y2 248 aaKnown RBP18.67■□□□□ 0.58
SHOX2-204ENST00000483851 TRBV7-3A0A075B6L6 115 aa18.67■□□□□ 0.58
SHOX2-204ENST00000483851 EMP1P54849 157 aa18.66■□□□□ 0.58
SHOX2-204ENST00000483851 RPL36AP83881 106 aaKnown RBP18.66■□□□□ 0.58
SHOX2-204ENST00000483851 C20orf203Q8NBC4 194 aa18.66■□□□□ 0.58
SHOX2-204ENST00000483851 RPL36ALQ969Q0 106 aaKnown RBP18.66■□□□□ 0.58
SHOX2-204ENST00000483851 IGIPA6NJ69 53 aa18.65■□□□□ 0.58
SHOX2-204ENST00000483851 SLC25A29Q8N8R3 303 aa18.65■□□□□ 0.58
SHOX2-204ENST00000483851 COL6A5A8TX70 2615 aa18.65■□□□□ 0.58
SHOX2-204ENST00000483851 TTTY13Q9BZ97 58 aa18.65■□□□□ 0.58
SHOX2-204ENST00000483851 Q9UF83 564 aa18.65■□□□□ 0.58
SHOX2-204ENST00000483851 SAMD5Q5TGI4 173 aa18.64■□□□□ 0.57
SHOX2-204ENST00000483851 PRSS29PA6NIE9 313 aa18.63■□□□□ 0.57
SHOX2-204ENST00000483851 TRGV4A0A0C4DH28 118 aa18.62■□□□□ 0.57
SHOX2-204ENST00000483851 UBE2V1Q13404 147 aa18.62■□□□□ 0.57
SHOX2-204ENST00000483851 DAZ4Q86SG3 579 aaKnown RBP18.62■□□□□ 0.57
SHOX2-204ENST00000483851 ZNRF2Q8NHG8 242 aa18.62■□□□□ 0.57
SHOX2-204ENST00000483851 DAZ3Q9NR90 486 aaKnown RBP18.62■□□□□ 0.57
SHOX2-204ENST00000483851 COTL1Q14019 142 aa18.61■□□□□ 0.57
SHOX2-204ENST00000483851 FHL2Q14192 279 aa18.61■□□□□ 0.57
SHOX2-204ENST00000483851 IGHV4-28A0A0C4DH34 117 aa18.6■□□□□ 0.57
SHOX2-204ENST00000483851 CCL25O15444 150 aa18.6■□□□□ 0.57
SHOX2-204ENST00000483851 Q8NAQ8 132 aa18.6■□□□□ 0.57
SHOX2-204ENST00000483851 TRBV25-1A0A075B6N4 114 aa18.6■□□□□ 0.57
SHOX2-204ENST00000483851 G3V4G9 280 aa18.6■□□□□ 0.57
SHOX2-204ENST00000483851 RPL39P62891 51 aaKnown RBP18.6■□□□□ 0.57
SHOX2-204ENST00000483851 MAPKAPK5-AS1Q8N8E1 139 aa18.6■□□□□ 0.57
SHOX2-204ENST00000483851 DEFB130BP0DP73 79 aa18.59■□□□□ 0.57
SHOX2-204ENST00000483851 DEFB130AP0DP74 79 aa18.59■□□□□ 0.57
SHOX2-204ENST00000483851 UBE2D3P61077 147 aa18.59■□□□□ 0.57
SHOX2-204ENST00000483851 UBE2D2P62837 147 aa18.59■□□□□ 0.57
SHOX2-204ENST00000483851 FAM222AQ5U5X8 452 aa18.59■□□□□ 0.57
SHOX2-204ENST00000483851 PYGO1Q9Y3Y4 419 aa18.59■□□□□ 0.57
SHOX2-204ENST00000483851 PRADC1Q9BSG0 188 aa18.58■□□□□ 0.57
SHOX2-204ENST00000483851 DEFB104AQ8WTQ1 72 aa18.58■□□□□ 0.56
SHOX2-204ENST00000483851 A6NDN8 102 aa18.56■□□□□ 0.56
SHOX2-204ENST00000483851 CHAC1Q9BUX1 264 aa18.56■□□□□ 0.56
SHOX2-204ENST00000483851 PAPPA-AS1Q5QFB9 102 aa18.56■□□□□ 0.56
SHOX2-204ENST00000483851 CHCHD7Q9BUK0 85 aa18.56■□□□□ 0.56
SHOX2-204ENST00000483851 IGLV4-69A0A075B6H9 119 aa18.55■□□□□ 0.56
SHOX2-204ENST00000483851 H3BRM9 83 aa18.55■□□□□ 0.56
SHOX2-204ENST00000483851 PMVKQ15126 192 aa18.55■□□□□ 0.56
SHOX2-204ENST00000483851 TEX48A0A1B0GUV7 120 aa18.54■□□□□ 0.56
SHOX2-204ENST00000483851 CRYBA4P53673 196 aa18.54■□□□□ 0.56
SHOX2-204ENST00000483851 PTTG1IPP53801 180 aa18.54■□□□□ 0.56
SHOX2-204ENST00000483851 PHLDA1Q8WV24 401 aaPredicted RBP18.54■□□□□ 0.56
SHOX2-204ENST00000483851 CST9LQ9H4G1 147 aa18.54■□□□□ 0.56
SHOX2-204ENST00000483851 E9PLD3 99 aa18.53■□□□□ 0.56
SHOX2-204ENST00000483851 GTSF1LQ9H1H1 148 aa18.53■□□□□ 0.56
SHOX2-204ENST00000483851 SPANXA1Q9NS26 97 aa18.53■□□□□ 0.56
SHOX2-204ENST00000483851 TRAV8-6A0A0B4J262 113 aa18.52■□□□□ 0.56
SHOX2-204ENST00000483851 GAGE12JA6NER3 117 aa18.52■□□□□ 0.56
SHOX2-204ENST00000483851 SPART-AS1P0CW21 52 aa18.52■□□□□ 0.56
SHOX2-204ENST00000483851 GAGE4Q13068 117 aa18.52■□□□□ 0.56
SHOX2-204ENST00000483851 GAGE5Q13069 117 aa18.52■□□□□ 0.56
SHOX2-204ENST00000483851 GAGE13Q4V321 117 aa18.52■□□□□ 0.56
SHOX2-204ENST00000483851 IGHV3-38A0A0C4DH36 116 aa18.52■□□□□ 0.55
SHOX2-204ENST00000483851 VAMP3Q15836 100 aa18.52■□□□□ 0.55
SHOX2-204ENST00000483851 TM2D2Q9BX73 214 aa18.51■□□□□ 0.55
SHOX2-204ENST00000483851 PRO0255Q9UI72 69 aa18.51■□□□□ 0.55
SHOX2-204ENST00000483851 TIMM21Q9BVV7 248 aa18.5■□□□□ 0.55
SHOX2-204ENST00000483851 C11orf86A6NJI1 115 aa18.5■□□□□ 0.55
SHOX2-204ENST00000483851 LINC00694P0DN24 101 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms