RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 COTL1Q14019 142 aa12.85□□□□□ -0.35
HPS4-213ENST00000483631 CLPSL2Q6UWE3 100 aa12.85□□□□□ -0.35
HPS4-213ENST00000483631 AKAP14Q86UN6 197 aa12.85□□□□□ -0.35
HPS4-213ENST00000483631 LYPD6BQ8NI32 183 aa12.85□□□□□ -0.35
HPS4-213ENST00000483631 RNASE7Q9H1E1 156 aaKnown RBP12.85□□□□□ -0.35
HPS4-213ENST00000483631 KRTAP29-1A8MX34 341 aaPredicted RBP12.84□□□□□ -0.35
HPS4-213ENST00000483631 NDUFS6O75380 124 aaKnown RBP12.84□□□□□ -0.35
HPS4-213ENST00000483631 J3QL48 77 aa12.83□□□□□ -0.36
HPS4-213ENST00000483631 UBE2L6O14933 153 aa12.83□□□□□ -0.36
HPS4-213ENST00000483631 TEX261Q6UWH6 196 aa12.83□□□□□ -0.36
HPS4-213ENST00000483631 FAM231DQ6ZW35 169 aa12.83□□□□□ -0.36
HPS4-213ENST00000483631 SMIM15Q7Z3B0 74 aa12.83□□□□□ -0.36
HPS4-213ENST00000483631 AMTP48728 403 aa12.82□□□□□ -0.36
HPS4-213ENST00000483631 KRTAP10-4P60372 401 aaPredicted RBP12.82□□□□□ -0.36
HPS4-213ENST00000483631 CNBPP62633 177 aaKnown RBP12.82□□□□□ -0.36
HPS4-213ENST00000483631 GATD1Q8NB37 220 aa12.82□□□□□ -0.36
HPS4-213ENST00000483631 IGLV4-60A0A075B6I1 120 aa12.81□□□□□ -0.36
HPS4-213ENST00000483631 NCR2O95944 276 aa12.81□□□□□ -0.36
HPS4-213ENST00000483631 CT83Q5H943 113 aa12.81□□□□□ -0.36
HPS4-213ENST00000483631 GTSF1Q8WW33 167 aa12.81□□□□□ -0.36
HPS4-213ENST00000483631 IGLV10-54A0A075B6I4 117 aa12.8□□□□□ -0.36
HPS4-213ENST00000483631 A8MWL6 223 aa12.8□□□□□ -0.36
HPS4-213ENST00000483631 FOXA3P55318 350 aaPredicted RBP12.8□□□□□ -0.36
HPS4-213ENST00000483631 ALKAL2Q6UX46 152 aa12.8□□□□□ -0.36
HPS4-213ENST00000483631 H7C423 109 aa12.79□□□□□ -0.36
HPS4-213ENST00000483631 GATCO43716 136 aaKnown RBP12.79□□□□□ -0.36
HPS4-213ENST00000483631 FAM210AQ96ND0 272 aa12.78□□□□□ -0.36
HPS4-213ENST00000483631 GFRA4Q9GZZ7 299 aa12.78□□□□□ -0.36
HPS4-213ENST00000483631 SDIM1Q6ZPB5 146 aa12.77□□□□□ -0.37
HPS4-213ENST00000483631 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.76□□□□□ -0.37
HPS4-213ENST00000483631 TRAV26-2A0A0B4J265 109 aa12.76□□□□□ -0.37
HPS4-213ENST00000483631 hDV102S1A0JD36 115 aa12.76□□□□□ -0.37
HPS4-213ENST00000483631 AP5S1Q9NUS5 200 aa12.76□□□□□ -0.37
HPS4-213ENST00000483631 TRBV6-5A0A0K0K1A5 114 aa12.75□□□□□ -0.37
HPS4-213ENST00000483631 CIRBPQ14011 172 aaKnown RBP12.75□□□□□ -0.37
HPS4-213ENST00000483631 FAM231BA6NCW3 169 aa12.74□□□□□ -0.37
HPS4-213ENST00000483631 SDHAF1A6NFY7 115 aa12.74□□□□□ -0.37
HPS4-213ENST00000483631 OXTP01178 125 aa12.74□□□□□ -0.37
HPS4-213ENST00000483631 APCSP02743 223 aa12.74□□□□□ -0.37
HPS4-213ENST00000483631 CFAP161Q6P656 301 aa12.74□□□□□ -0.37
HPS4-213ENST00000483631 BORCS7Q96B45 105 aa12.74□□□□□ -0.37
HPS4-213ENST00000483631 RPL39LQ96EH5 51 aaKnown RBP12.74□□□□□ -0.37
HPS4-213ENST00000483631 RPL37AP61513 92 aaKnown RBP12.73□□□□□ -0.37
HPS4-213ENST00000483631 AMMECR1LQ6DCA0 310 aa12.73□□□□□ -0.37
HPS4-213ENST00000483631 SMIM7Q9BQ49 75 aa12.73□□□□□ -0.37
HPS4-213ENST00000483631 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.73□□□□□ -0.37
HPS4-213ENST00000483631 IGHV3-64A0A075B6Q5 118 aa12.72□□□□□ -0.37
HPS4-213ENST00000483631 ZNF25P17030 456 aaPredicted RBP12.72□□□□□ -0.37
HPS4-213ENST00000483631 LINC01551Q86U37 167 aa12.72□□□□□ -0.37
HPS4-213ENST00000483631 TSKUQ8WUA8 353 aa12.72□□□□□ -0.37
HPS4-213ENST00000483631 RNF185Q96GF1 192 aa12.72□□□□□ -0.37
HPS4-213ENST00000483631 EIF5A2Q9GZV4 153 aaKnown RBP12.72□□□□□ -0.37
HPS4-213ENST00000483631 A0A1B0GUT8 65 aa12.71□□□□□ -0.37
HPS4-213ENST00000483631 I3L3M4 83 aa12.71□□□□□ -0.37
HPS4-213ENST00000483631 TMEM191AQ9H0A3 160 aa12.71□□□□□ -0.37
HPS4-213ENST00000483631 OSTCQ9NRP0 149 aa12.71□□□□□ -0.37
HPS4-213ENST00000483631 hCG_2014768A0A024R1R8 64 aa12.7□□□□□ -0.38
HPS4-213ENST00000483631 CEBPGP53567 150 aa12.7□□□□□ -0.38
HPS4-213ENST00000483631 GAGE12HA6NDE8 117 aa12.69□□□□□ -0.38
HPS4-213ENST00000483631 HIGD1CA8MV81 97 aa12.69□□□□□ -0.38
HPS4-213ENST00000483631 SLPIP03973 132 aa12.69□□□□□ -0.38
HPS4-213ENST00000483631 FGF6P10767 208 aa12.69□□□□□ -0.38
HPS4-213ENST00000483631 C15orf56Q8N910 161 aa12.69□□□□□ -0.38
HPS4-213ENST00000483631 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.68□□□□□ -0.38
HPS4-213ENST00000483631 IGKV2-29A2NJV5 120 aaPredicted RBP12.68□□□□□ -0.38
HPS4-213ENST00000483631 ZNF727A8MUV8 499 aa12.68□□□□□ -0.38
HPS4-213ENST00000483631 PANO1I0J062 215 aa12.68□□□□□ -0.38
HPS4-213ENST00000483631 PMCHP20382 165 aa12.68□□□□□ -0.38
HPS4-213ENST00000483631 RNASEKQ6P5S7 137 aaKnown RBP12.68□□□□□ -0.38
HPS4-213ENST00000483631 CHCHD10Q8WYQ3 142 aaPredicted RBP12.68□□□□□ -0.38
HPS4-213ENST00000483631 LRP1Q07954 4544 aaKnown RBP12.68□□□□□ -0.38
HPS4-213ENST00000483631 SRP19P09132 144 aaKnown RBP12.67□□□□□ -0.38
HPS4-213ENST00000483631 ESDP10768 282 aa12.67□□□□□ -0.38
HPS4-213ENST00000483631 OR5A1Q8NGJ0 315 aa12.67□□□□□ -0.38
HPS4-213ENST00000483631 MRAP2Q96G30 205 aa12.67□□□□□ -0.38
HPS4-213ENST00000483631 BTF3L4Q96K17 158 aa12.67□□□□□ -0.38
HPS4-213ENST00000483631 ST20Q9HBF5 79 aa12.67□□□□□ -0.38
HPS4-213ENST00000483631 UBR4Q5T4S7 5183 aa12.67□□□□□ -0.38
HPS4-213ENST00000483631 POLR2KP53803 58 aaKnown RBP12.66□□□□□ -0.38
HPS4-213ENST00000483631 TMEM101Q96IK0 257 aa12.66□□□□□ -0.38
HPS4-213ENST00000483631 GVQW2A0A096LPI5 108 aaPredicted RBP12.65□□□□□ -0.38
HPS4-213ENST00000483631 IGKV3OR2-268A0A0C4DH90 116 aa12.65□□□□□ -0.38
HPS4-213ENST00000483631 TRBV27A0A0K0K1C4 114 aa12.65□□□□□ -0.38
HPS4-213ENST00000483631 RPS10P46783 165 aaKnown RBP12.65□□□□□ -0.38
HPS4-213ENST00000483631 FAM74A3Q4VXF1 159 aa12.65□□□□□ -0.38
HPS4-213ENST00000483631 SPACA4Q8TDM5 124 aa12.65□□□□□ -0.38
HPS4-213ENST00000483631 PPP1R17O96001 155 aa12.64□□□□□ -0.39
HPS4-213ENST00000483631 TSHBP01222 138 aa12.64□□□□□ -0.39
HPS4-213ENST00000483631 RAB4AP20338 218 aa12.64□□□□□ -0.39
HPS4-213ENST00000483631 MRPL52Q86TS9 123 aaKnown RBP12.64□□□□□ -0.39
HPS4-213ENST00000483631 FAT3Q8TDW7 4589 aa12.64□□□□□ -0.39
HPS4-213ENST00000483631 RIGQ13278 110 aa12.63□□□□□ -0.39
HPS4-213ENST00000483631 SERTAD4-AS1Q5TG53 156 aa12.63□□□□□ -0.39
HPS4-213ENST00000483631 V9GYV3 84 aa12.63□□□□□ -0.39
HPS4-213ENST00000483631 PKHD1L1Q86WI1 4243 aa12.63□□□□□ -0.39
HPS4-213ENST00000483631 A0A087WYN8 130 aa12.62□□□□□ -0.39
HPS4-213ENST00000483631 GAS8-AS1O95177 125 aa12.62□□□□□ -0.39
HPS4-213ENST00000483631 FOXI1Q12951 378 aa12.62□□□□□ -0.39
HPS4-213ENST00000483631 TMEM242Q9NWH2 141 aa12.62□□□□□ -0.39
HPS4-213ENST00000483631 PLAC8Q9NZF1 115 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms