RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 RBMY1CP0DJD4 496 aa5.8□□□□□ -1.48
COL4A5-205ENST00000483338 PMAIP1Q13794 54 aa5.8□□□□□ -1.48
COL4A5-205ENST00000483338 RBMY1FQ15415 496 aaKnown RBP5.8□□□□□ -1.48
COL4A5-205ENST00000483338 MIAQ16674 131 aa5.8□□□□□ -1.48
COL4A5-205ENST00000483338 GPHB5Q86YW7 130 aa5.8□□□□□ -1.48
COL4A5-205ENST00000483338 Q8N2B8 174 aa5.8□□□□□ -1.48
COL4A5-205ENST00000483338 LINC00574Q9H8X3 128 aa5.8□□□□□ -1.48
COL4A5-205ENST00000483338 ZFHX4Q86UP3 3567 aa5.8□□□□□ -1.48
COL4A5-205ENST00000483338 IGHV3OR16-8A0A075B7F1 116 aa5.8□□□□□ -1.48
COL4A5-205ENST00000483338 CSMD1Q96PZ7 3565 aa5.8□□□□□ -1.48
COL4A5-205ENST00000483338 RPL28P46779 137 aaKnown RBP5.79□□□□□ -1.48
COL4A5-205ENST00000483338 SMAD5-AS1Q9Y6J3 95 aa5.79□□□□□ -1.48
COL4A5-205ENST00000483338 SMG1Q96Q15 3661 aaKnown RBP5.79□□□□□ -1.48
COL4A5-205ENST00000483338 TEX22C9J3V5 150 aa5.79□□□□□ -1.48
COL4A5-205ENST00000483338 M0R381 172 aa5.79□□□□□ -1.48
COL4A5-205ENST00000483338 MGPP08493 103 aa5.79□□□□□ -1.48
COL4A5-205ENST00000483338 IGHV3-30-3P0DP02 117 aa5.79□□□□□ -1.48
COL4A5-205ENST00000483338 CCL3L1P16619 93 aa5.79□□□□□ -1.48
COL4A5-205ENST00000483338 FAM222AQ5U5X8 452 aa5.79□□□□□ -1.48
COL4A5-205ENST00000483338 K7EIM0 57 aa5.79□□□□□ -1.48
COL4A5-205ENST00000483338 C9orf129Q5T035 196 aaKnown RBP5.79□□□□□ -1.48
COL4A5-205ENST00000483338 TMEM89A2RUT3 159 aa5.78□□□□□ -1.48
COL4A5-205ENST00000483338 DNAL4O96015 105 aa5.78□□□□□ -1.48
COL4A5-205ENST00000483338 NDPQ00604 133 aa5.78□□□□□ -1.48
COL4A5-205ENST00000483338 C9orf106Q8NAJ2 232 aa5.78□□□□□ -1.48
COL4A5-205ENST00000483338 TRAV23DV6A0A075B6W5 121 aa5.78□□□□□ -1.48
COL4A5-205ENST00000483338 CCKP06307 115 aa5.78□□□□□ -1.48
COL4A5-205ENST00000483338 FAM218AQ96MZ4 157 aa5.78□□□□□ -1.48
COL4A5-205ENST00000483338 DMXL1Q9Y485 3027 aa5.78□□□□□ -1.48
COL4A5-205ENST00000483338 MRPS36P82909 103 aaKnown RBP5.78□□□□□ -1.48
COL4A5-205ENST00000483338 TRBV7-6A0A0J9YX20 115 aa5.77□□□□□ -1.49
COL4A5-205ENST00000483338 A0A0J9YXV3 536 aa5.77□□□□□ -1.49
COL4A5-205ENST00000483338 TRBV12-3P01733 135 aa5.77□□□□□ -1.49
COL4A5-205ENST00000483338 C9orf47Q6ZRZ4 202 aa5.77□□□□□ -1.49
COL4A5-205ENST00000483338 TIMM17BO60830 172 aa5.77□□□□□ -1.49
COL4A5-205ENST00000483338 WFDC9Q8NEX5 89 aa5.77□□□□□ -1.49
COL4A5-205ENST00000483338 C14orf132Q9NPU4 83 aa5.77□□□□□ -1.49
COL4A5-205ENST00000483338 PKD1L2Q7Z442 2459 aa5.77□□□□□ -1.49
COL4A5-205ENST00000483338 ZNF561-AS1K7EIQ3 104 aa5.76□□□□□ -1.49
COL4A5-205ENST00000483338 APRG1Q8IVJ8 170 aa5.76□□□□□ -1.49
COL4A5-205ENST00000483338 BPESC1Q9GZL8 116 aa5.76□□□□□ -1.49
COL4A5-205ENST00000483338 ZFAND3Q9H8U3 227 aa5.76□□□□□ -1.49
COL4A5-205ENST00000483338 BOD1L1Q8NFC6 3051 aa5.76□□□□□ -1.49
COL4A5-205ENST00000483338 BUB1B-PAK6H3BSN5 160 aa5.76□□□□□ -1.49
COL4A5-205ENST00000483338 Q9HAA7 133 aa5.76□□□□□ -1.49
COL4A5-205ENST00000483338 NDUFB3O43676 98 aa5.76□□□□□ -1.49
COL4A5-205ENST00000483338 POLR2KP53803 58 aaKnown RBP5.76□□□□□ -1.49
COL4A5-205ENST00000483338 MSMPQ1L6U9 139 aa5.76□□□□□ -1.49
COL4A5-205ENST00000483338 GAFA1Q96PS6 74 aa5.76□□□□□ -1.49
COL4A5-205ENST00000483338 NDUFA12Q9UI09 145 aa5.76□□□□□ -1.49
COL4A5-205ENST00000483338 MUC4Q99102 2169 aa5.75□□□□□ -1.49
COL4A5-205ENST00000483338 IGHV3OR16-13A0A075B7E8 117 aa5.75□□□□□ -1.49
COL4A5-205ENST00000483338 IGHV3-74A0A0B4J1X5 117 aa5.75□□□□□ -1.49
COL4A5-205ENST00000483338 TRBV27A0A0K0K1C4 114 aa5.75□□□□□ -1.49
COL4A5-205ENST00000483338 A8MZ25 164 aa5.75□□□□□ -1.49
COL4A5-205ENST00000483338 TMEM30BQ3MIR4 351 aa5.75□□□□□ -1.49
COL4A5-205ENST00000483338 SNRPD3P62318 126 aaKnown RBP5.75□□□□□ -1.49
COL4A5-205ENST00000483338 RBM3P98179 157 aaKnown RBP5.75□□□□□ -1.49
COL4A5-205ENST00000483338 FAM208BQ5VWN6 2430 aa5.74□□□□□ -1.49
COL4A5-205ENST00000483338 LYNX1G3V0Z9 82 aa5.74□□□□□ -1.49
COL4A5-205ENST00000483338 LYNX1P0DP58 116 aa5.74□□□□□ -1.49
COL4A5-205ENST00000483338 VSIG2Q96IQ7 327 aa5.74□□□□□ -1.49
COL4A5-205ENST00000483338 ANKHD1Q8IWZ3 2542 aaKnown RBP5.74□□□□□ -1.49
COL4A5-205ENST00000483338 AKAP13Q12802 2813 aa5.74□□□□□ -1.49
COL4A5-205ENST00000483338 IGKV3-7A0A075B6H7 116 aa5.74□□□□□ -1.49
COL4A5-205ENST00000483338 IGHV1-18A0A0C4DH31 117 aa5.74□□□□□ -1.49
COL4A5-205ENST00000483338 IGHV1-69P01742 117 aa5.74□□□□□ -1.49
COL4A5-205ENST00000483338 IGHV3-23P01764 117 aa5.74□□□□□ -1.49
COL4A5-205ENST00000483338 CD164Q04900 197 aa5.74□□□□□ -1.49
COL4A5-205ENST00000483338 FAM229BQ4G0N7 80 aa5.74□□□□□ -1.49
COL4A5-205ENST00000483338 PRR9Q5T870 116 aa5.74□□□□□ -1.49
COL4A5-205ENST00000483338 MPLKIPQ8TAP9 179 aa5.74□□□□□ -1.49
COL4A5-205ENST00000483338 DMXL2Q8TDJ6 3036 aa5.74□□□□□ -1.49
COL4A5-205ENST00000483338 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.74□□□□□ -1.49
COL4A5-205ENST00000483338 PPP1R17O96001 155 aa5.74□□□□□ -1.49
COL4A5-205ENST00000483338 KLKP1Q107X0 134 aa5.74□□□□□ -1.49
COL4A5-205ENST00000483338 F8WEM9 126 aa5.73□□□□□ -1.49
COL4A5-205ENST00000483338 RMI2Q96E14 147 aa5.73□□□□□ -1.49
COL4A5-205ENST00000483338 SNURFQ9Y675 71 aa5.73□□□□□ -1.49
COL4A5-205ENST00000483338 C2CD3Q4AC94 2353 aa5.73□□□□□ -1.49
COL4A5-205ENST00000483338 TACC2O95359 2948 aa5.73□□□□□ -1.49
COL4A5-205ENST00000483338 VCYO14598 125 aa5.73□□□□□ -1.49
COL4A5-205ENST00000483338 LINC00315P59091 139 aa5.73□□□□□ -1.49
COL4A5-205ENST00000483338 RPL11P62913 178 aaKnown RBP5.73□□□□□ -1.49
COL4A5-205ENST00000483338 C1orf158Q8N1D5 194 aa5.73□□□□□ -1.49
COL4A5-205ENST00000483338 CSPG4Q6UVK1 2322 aa5.72□□□□□ -1.49
COL4A5-205ENST00000483338 IGHV4OR15-8A0A075B7B6 117 aa5.72□□□□□ -1.49
COL4A5-205ENST00000483338 A0A087WW49 117 aa5.72□□□□□ -1.49
COL4A5-205ENST00000483338 IGHV3-49A0A0A0MS15 119 aa5.72□□□□□ -1.49
COL4A5-205ENST00000483338 HOXD3P31249 432 aaPredicted RBP5.72□□□□□ -1.49
COL4A5-205ENST00000483338 Q6ZRU5 148 aa5.72□□□□□ -1.49
COL4A5-205ENST00000483338 PRR15Q8IV56 129 aa5.72□□□□□ -1.49
COL4A5-205ENST00000483338 PHLDA3Q9Y5J5 127 aa5.72□□□□□ -1.49
COL4A5-205ENST00000483338 LOC400499M0QZD8 3231 aa5.72□□□□□ -1.49
COL4A5-205ENST00000483338 F8W735 103 aaPredicted RBP5.72□□□□□ -1.49
COL4A5-205ENST00000483338 IGKV3-15P01624 115 aa5.72□□□□□ -1.49
COL4A5-205ENST00000483338 CFHR3Q02985 330 aa5.72□□□□□ -1.49
COL4A5-205ENST00000483338 COPS9Q8WXC6 57 aa5.72□□□□□ -1.49
COL4A5-205ENST00000483338 PTPN13Q12923 2485 aa5.72□□□□□ -1.49
COL4A5-205ENST00000483338 IGHV1-58A0A0C4DH39 117 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms