RNA–Protein interactions for RNA: ENST00000483142.5

HDAC9-224, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 305 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-224ENST00000483142 NEGR1Q7Z3B1 354 aa3.15□□□□□ -1.91
HDAC9-224ENST00000483142 C18orf32Q8TCD1 76 aa3.15□□□□□ -1.91
HDAC9-224ENST00000483142 LINC00476Q8WZB0 136 aa3.15□□□□□ -1.91
HDAC9-224ENST00000483142 PRELID3AQ96N28 172 aa3.15□□□□□ -1.91
HDAC9-224ENST00000483142 Q9UF83 564 aa3.15□□□□□ -1.91
HDAC9-224ENST00000483142 VPS13DQ5THJ4 4388 aa3.14□□□□□ -1.91
HDAC9-224ENST00000483142 A0A0J9YY99 117 aa3.14□□□□□ -1.91
HDAC9-224ENST00000483142 GAGE12JA6NER3 117 aa3.14□□□□□ -1.91
HDAC9-224ENST00000483142 F5H697 171 aa3.14□□□□□ -1.91
HDAC9-224ENST00000483142 SMKR1H3BMG3 65 aa3.14□□□□□ -1.91
HDAC9-224ENST00000483142 TSHBP01222 138 aa3.14□□□□□ -1.91
HDAC9-224ENST00000483142 ESDP10768 282 aa3.14□□□□□ -1.91
HDAC9-224ENST00000483142 CKS2P33552 79 aa3.14□□□□□ -1.91
HDAC9-224ENST00000483142 PKIAP61925 76 aa3.14□□□□□ -1.91
HDAC9-224ENST00000483142 GAGE1Q13065 139 aa3.14□□□□□ -1.91
HDAC9-224ENST00000483142 GAGE4Q13068 117 aa3.14□□□□□ -1.91
HDAC9-224ENST00000483142 GAGE5Q13069 117 aa3.14□□□□□ -1.91
HDAC9-224ENST00000483142 COA6Q5JTJ3 125 aaKnown RBP3.14□□□□□ -1.91
HDAC9-224ENST00000483142 LGALS9CQ6DKI2 356 aa3.14□□□□□ -1.91
HDAC9-224ENST00000483142 NTM-AS1Q6ZSK4 140 aa3.14□□□□□ -1.91
HDAC9-224ENST00000483142 MRPL52Q86TS9 123 aaKnown RBP3.14□□□□□ -1.91
HDAC9-224ENST00000483142 Q8N8P6 123 aa3.14□□□□□ -1.91
HDAC9-224ENST00000483142 ATP6V0E2Q8NHE4 81 aa3.14□□□□□ -1.91
HDAC9-224ENST00000483142 ZNRF2Q8NHG8 242 aa3.14□□□□□ -1.91
HDAC9-224ENST00000483142 MAP1LC3AQ9H492 121 aa3.14□□□□□ -1.91
HDAC9-224ENST00000483142 ST20Q9HBF5 79 aa3.14□□□□□ -1.91
HDAC9-224ENST00000483142 NXT2Q9NPJ8 142 aaKnown RBP3.14□□□□□ -1.91
HDAC9-224ENST00000483142 TRAPPC1Q9Y5R8 145 aa3.14□□□□□ -1.91
HDAC9-224ENST00000483142 CSMD3Q7Z407 3707 aa3.14□□□□□ -1.91
HDAC9-224ENST00000483142 TGP01266 2768 aa3.13□□□□□ -1.91
HDAC9-224ENST00000483142 TRBV6-8A0A0A6YYG3 113 aa3.13□□□□□ -1.91
HDAC9-224ENST00000483142 LINC01549A6NIU2 74 aa3.13□□□□□ -1.91
HDAC9-224ENST00000483142 IGLL5B9A064 214 aa3.13□□□□□ -1.91
HDAC9-224ENST00000483142 H7C423 109 aa3.13□□□□□ -1.91
HDAC9-224ENST00000483142 I3L3M4 83 aa3.13□□□□□ -1.91
HDAC9-224ENST00000483142 K7EP13 123 aa3.13□□□□□ -1.91
HDAC9-224ENST00000483142 TRGC2P03986 189 aa3.13□□□□□ -1.91
HDAC9-224ENST00000483142 NPSP0C0P6 89 aa3.13□□□□□ -1.91
HDAC9-224ENST00000483142 DNAH10OSP0CZ25 163 aa3.13□□□□□ -1.91
HDAC9-224ENST00000483142 BTF3P20290 206 aaKnown RBP3.13□□□□□ -1.91
HDAC9-224ENST00000483142 PMCHP20382 165 aa3.13□□□□□ -1.91
HDAC9-224ENST00000483142 GCSHP23434 173 aa3.13□□□□□ -1.91
HDAC9-224ENST00000483142 Q0VG73 95 aa3.13□□□□□ -1.91
HDAC9-224ENST00000483142 FABP9Q0Z7S8 132 aa3.13□□□□□ -1.91
HDAC9-224ENST00000483142 COTL1Q14019 142 aa3.13□□□□□ -1.91
HDAC9-224ENST00000483142 ESRGQ1W209 222 aa3.13□□□□□ -1.91
HDAC9-224ENST00000483142 LINC01556Q5JQF7 62 aa3.13□□□□□ -1.91
HDAC9-224ENST00000483142 XP32Q5T750 250 aa3.13□□□□□ -1.91
HDAC9-224ENST00000483142 ZFAND6Q6FIF0 208 aa3.13□□□□□ -1.91
HDAC9-224ENST00000483142 LYPD5Q6UWN5 251 aa3.13□□□□□ -1.91
HDAC9-224ENST00000483142 URB1-AS1Q96HZ7 61 aa3.13□□□□□ -1.91
HDAC9-224ENST00000483142 TIMM21Q9BVV7 248 aa3.13□□□□□ -1.91
HDAC9-224ENST00000483142 LINC00588Q9Y4M8 146 aa3.13□□□□□ -1.91
HDAC9-224ENST00000483142 TNFRSF18Q9Y5U5 241 aa3.13□□□□□ -1.91
HDAC9-224ENST00000483142 SACSQ9NZJ4 4579 aa3.13□□□□□ -1.91
HDAC9-224ENST00000483142 TRBV25-1A0A075B6N4 114 aa3.12□□□□□ -1.91
HDAC9-224ENST00000483142 A0A096LNJ9 63 aa3.12□□□□□ -1.91
HDAC9-224ENST00000483142 IGHV1-24A0A0C4DH33 117 aa3.12□□□□□ -1.91
HDAC9-224ENST00000483142 LCE6AA0A183 80 aa3.12□□□□□ -1.91
HDAC9-224ENST00000483142 VCYO14598 125 aa3.12□□□□□ -1.91
HDAC9-224ENST00000483142 HIST1H2BKO60814 126 aa3.12□□□□□ -1.91
HDAC9-224ENST00000483142 NUDT3O95989 172 aa3.12□□□□□ -1.91
HDAC9-224ENST00000483142 HIST1H2BJP06899 126 aa3.12□□□□□ -1.91
HDAC9-224ENST00000483142 ZNF25P17030 456 aaPredicted RBP3.12□□□□□ -1.91
HDAC9-224ENST00000483142 HIST1H2BOP23527 126 aa3.12□□□□□ -1.91
HDAC9-224ENST00000483142 HIST1H2BBP33778 126 aa3.12□□□□□ -1.91
HDAC9-224ENST00000483142 AMTP48728 403 aa3.12□□□□□ -1.91
HDAC9-224ENST00000483142 CCL18P55774 89 aa3.12□□□□□ -1.91
HDAC9-224ENST00000483142 HIST1H2BDP58876 126 aa3.12□□□□□ -1.91
HDAC9-224ENST00000483142 SSTP61278 116 aa3.12□□□□□ -1.91
HDAC9-224ENST00000483142 HIST1H2BCP62807 126 aa3.12□□□□□ -1.91
HDAC9-224ENST00000483142 LAGE3Q14657 143 aa3.12□□□□□ -1.91
HDAC9-224ENST00000483142 HIST2H2BEQ16778 126 aa3.12□□□□□ -1.91
HDAC9-224ENST00000483142 KIAA1644Q3SXP7 199 aa3.12□□□□□ -1.91
HDAC9-224ENST00000483142 ORMDL2Q53FV1 153 aa3.12□□□□□ -1.91
HDAC9-224ENST00000483142 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.12□□□□□ -1.91
HDAC9-224ENST00000483142 NIT1Q86X76 327 aa3.12□□□□□ -1.91
HDAC9-224ENST00000483142 WFDC10BQ8IUB3 73 aa3.12□□□□□ -1.91
HDAC9-224ENST00000483142 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.12□□□□□ -1.91
HDAC9-224ENST00000483142 C20orf203Q8NBC4 194 aa3.12□□□□□ -1.91
HDAC9-224ENST00000483142 HIST1H2BHQ93079 126 aa3.12□□□□□ -1.91
HDAC9-224ENST00000483142 CHCHD1Q96BP2 118 aaKnown RBP3.12□□□□□ -1.91
HDAC9-224ENST00000483142 PACRGQ96M98 296 aaPredicted RBP3.12□□□□□ -1.91
HDAC9-224ENST00000483142 KIR2DL4Q99706 377 aa3.12□□□□□ -1.91
HDAC9-224ENST00000483142 HIST1H2BNQ99877 126 aa3.12□□□□□ -1.91
HDAC9-224ENST00000483142 HIST1H2BMQ99879 126 aa3.12□□□□□ -1.91
HDAC9-224ENST00000483142 CSDC2Q9Y534 153 aaKnown RBP3.12□□□□□ -1.91
HDAC9-224ENST00000483142 KMT2CQ8NEZ4 4911 aaKnown RBP3.11□□□□□ -1.91
HDAC9-224ENST00000483142 IGHV3-38A0A0C4DH36 116 aa3.11□□□□□ -1.91
HDAC9-224ENST00000483142 A0A1B0GUV1 79 aa3.11□□□□□ -1.91
HDAC9-224ENST00000483142 MRPS36P82909 103 aaKnown RBP3.11□□□□□ -1.91
HDAC9-224ENST00000483142 TTC32Q5I0X7 151 aa3.11□□□□□ -1.91
HDAC9-224ENST00000483142 Q6ZR54 194 aa3.11□□□□□ -1.91
HDAC9-224ENST00000483142 C10orf126Q8N4M7 172 aa3.11□□□□□ -1.91
HDAC9-224ENST00000483142 FAM104AQ969W3 186 aa3.11□□□□□ -1.91
HDAC9-224ENST00000483142 TIMM17AQ99595 171 aa3.11□□□□□ -1.91
HDAC9-224ENST00000483142 TMEM243Q9BU79 118 aa3.11□□□□□ -1.91
HDAC9-224ENST00000483142 KRTAP1-5Q9BYS1 174 aa3.11□□□□□ -1.91
HDAC9-224ENST00000483142 SPANXA1Q9NS26 97 aa3.11□□□□□ -1.91
HDAC9-224ENST00000483142 PRR34Q9NV39 138 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms